RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 BRAPQ7Z569 592 aa17.03■□□□□ 0.32
SEC16A-202ENST00000290037 TTC22Q5TAA0 569 aa17.03■□□□□ 0.32
SEC16A-202ENST00000290037 FLT4P35916 1363 aa17.03■□□□□ 0.32
SEC16A-202ENST00000290037 TTC37Q6PGP7 1564 aa17.03■□□□□ 0.32
SEC16A-202ENST00000290037 BMS1Q14692 1282 aaKnown RBP17.02■□□□□ 0.32
SEC16A-202ENST00000290037 TMED8Q6PL24 325 aaPredicted RBP17.02■□□□□ 0.32
SEC16A-202ENST00000290037 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.02■□□□□ 0.32
SEC16A-202ENST00000290037 SSH1Q8WYL5 1049 aa17.02■□□□□ 0.32
SEC16A-202ENST00000290037 CDCA7LQ96GN5 454 aa17.02■□□□□ 0.32
SEC16A-202ENST00000290037 STX6O43752 255 aa17.02■□□□□ 0.31
SEC16A-202ENST00000290037 PPM1EQ8WY54 764 aa17.02■□□□□ 0.31
SEC16A-202ENST00000290037 TSGA10Q9BZW7 698 aa17.02■□□□□ 0.31
SEC16A-202ENST00000290037 TNRQ92752 1358 aa17.02■□□□□ 0.31
SEC16A-202ENST00000290037 SLC4A3P48751 1232 aa17.01■□□□□ 0.31
SEC16A-202ENST00000290037 CNKSR2Q8WXI2 1034 aa17.01■□□□□ 0.31
SEC16A-202ENST00000290037 TTC14Q96N46 770 aa17.01■□□□□ 0.31
SEC16A-202ENST00000290037 LMBR1Q8WVP7 490 aa17.01■□□□□ 0.31
SEC16A-202ENST00000290037 TMOD3Q9NYL9 352 aa17.01■□□□□ 0.31
SEC16A-202ENST00000290037 NUTM2FA1L443 756 aa17.01■□□□□ 0.31
SEC16A-202ENST00000290037 CADPS2Q86UW7 1296 aa17.01■□□□□ 0.31
SEC16A-202ENST00000290037 BCAR3O75815 825 aa17.01■□□□□ 0.31
SEC16A-202ENST00000290037 JAKMIP2Q96AA8 810 aa17.01■□□□□ 0.31
SEC16A-202ENST00000290037 ZNF213O14771 459 aa17■□□□□ 0.31
SEC16A-202ENST00000290037 TRIM14Q14142 442 aa17■□□□□ 0.31
SEC16A-202ENST00000290037 NCOA7Q8NI08 942 aa17■□□□□ 0.31
SEC16A-202ENST00000290037 ATP10BO94823 1461 aa17■□□□□ 0.31
SEC16A-202ENST00000290037 PPP1R42Q7Z4L9 355 aa17■□□□□ 0.31
SEC16A-202ENST00000290037 CCDC102BQ68D86 513 aa17■□□□□ 0.31
SEC16A-202ENST00000290037 NSRP1Q9H0G5 558 aaKnown RBP17■□□□□ 0.31
SEC16A-202ENST00000290037 EDC4Q6P2E9 1401 aaKnown RBP16.99■□□□□ 0.31
SEC16A-202ENST00000290037 CEP112Q8N8E3 955 aa16.99■□□□□ 0.31
SEC16A-202ENST00000290037 LLPHQ9BRT6 129 aaKnown RBP16.99■□□□□ 0.31
SEC16A-202ENST00000290037 BLMP54132 1417 aaPredicted RBP16.99■□□□□ 0.31
SEC16A-202ENST00000290037 RNF214Q8ND24 703 aa16.99■□□□□ 0.31
SEC16A-202ENST00000290037 RASAL2Q9UJF2 1139 aa16.99■□□□□ 0.31
SEC16A-202ENST00000290037 BICDL2A1A5D9 508 aa16.99■□□□□ 0.31
SEC16A-202ENST00000290037 FLIIQ13045 1269 aa16.99■□□□□ 0.31
SEC16A-202ENST00000290037 ADCY10Q96PN6 1610 aa16.99■□□□□ 0.31
SEC16A-202ENST00000290037 FOXD4L6Q3SYB3 417 aaPredicted RBP16.99■□□□□ 0.31
SEC16A-202ENST00000290037 FOXD4L3Q6VB84 417 aaPredicted RBP16.99■□□□□ 0.31
SEC16A-202ENST00000290037 BICDL1Q6ZP65 573 aa16.99■□□□□ 0.31
SEC16A-202ENST00000290037 CLIP2Q9UDT6 1046 aa16.99■□□□□ 0.31
SEC16A-202ENST00000290037 CCDC194A0A1B0GVG4 234 aa16.99■□□□□ 0.31
SEC16A-202ENST00000290037 ANKRD62A6NC57 917 aa16.99■□□□□ 0.31
SEC16A-202ENST00000290037 CWC25Q9NXE8 425 aaPredicted RBP16.99■□□□□ 0.31
SEC16A-202ENST00000290037 METTL24Q5JXM2 366 aa16.98■□□□□ 0.31
SEC16A-202ENST00000290037 CWC27Q6UX04 472 aaKnown RBP16.98■□□□□ 0.31
SEC16A-202ENST00000290037 LAMC1P11047 1609 aa16.98■□□□□ 0.31
SEC16A-202ENST00000290037 STRN4Q9NRL3 753 aa16.98■□□□□ 0.31
SEC16A-202ENST00000290037 ENOX2Q16206 610 aaKnown RBP16.98■□□□□ 0.31
SEC16A-202ENST00000290037 FAM200AQ8TCP9 573 aa16.98■□□□□ 0.31
SEC16A-202ENST00000290037 NEFHP12036 1026 aa16.98■□□□□ 0.31
SEC16A-202ENST00000290037 LRSAM1Q6UWE0 723 aa16.98■□□□□ 0.31
SEC16A-202ENST00000290037 TSR2Q969E8 191 aaKnown RBP16.98■□□□□ 0.31
SEC16A-202ENST00000290037 NPHP3Q7Z494 1330 aa16.98■□□□□ 0.31
SEC16A-202ENST00000290037 TTLL5Q6EMB2 1281 aa16.98■□□□□ 0.31
SEC16A-202ENST00000290037 TANGO6Q9C0B7 1094 aa16.98■□□□□ 0.31
SEC16A-202ENST00000290037 CROCC2H7BZ55 1655 aa16.98■□□□□ 0.31
SEC16A-202ENST00000290037 KCNG1Q9UIX4 513 aa16.97■□□□□ 0.31
SEC16A-202ENST00000290037 PREX2Q70Z35 1606 aa16.97■□□□□ 0.31
SEC16A-202ENST00000290037 TMEM132AQ24JP5 1023 aa16.97■□□□□ 0.31
SEC16A-202ENST00000290037 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.97■□□□□ 0.31
SEC16A-202ENST00000290037 TRIM27P14373 513 aa16.97■□□□□ 0.31
SEC16A-202ENST00000290037 SMARCC1Q92922 1105 aaPredicted RBP16.97■□□□□ 0.31
SEC16A-202ENST00000290037 RAD21O60216 631 aa16.97■□□□□ 0.31
SEC16A-202ENST00000290037 CYLC1P35663 651 aaPredicted RBP16.97■□□□□ 0.31
SEC16A-202ENST00000290037 HDAC9Q9UKV0 1011 aa16.97■□□□□ 0.31
SEC16A-202ENST00000290037 ARAP3Q8WWN8 1544 aa16.97■□□□□ 0.31
SEC16A-202ENST00000290037 APBB1IPQ7Z5R6 666 aaPredicted RBP16.97■□□□□ 0.31
SEC16A-202ENST00000290037 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.97■□□□□ 0.31
SEC16A-202ENST00000290037 CDCA7Q9BWT1 371 aaPredicted RBP16.97■□□□□ 0.31
SEC16A-202ENST00000290037 TET3O43151 1660 aa16.97■□□□□ 0.31
SEC16A-202ENST00000290037 CACNA2D4Q7Z3S7 1137 aa16.97■□□□□ 0.31
SEC16A-202ENST00000290037 NPATQ14207 1427 aa16.96■□□□□ 0.31
SEC16A-202ENST00000290037 KRT83P78385 493 aa16.96■□□□□ 0.31
SEC16A-202ENST00000290037 SPATA24Q86W54 205 aa16.96■□□□□ 0.31
SEC16A-202ENST00000290037 IFNL2Q8IZJ0 200 aa16.96■□□□□ 0.31
SEC16A-202ENST00000290037 SNRPA1P09661 255 aaKnown RBP16.96■□□□□ 0.31
SEC16A-202ENST00000290037 ZNF76P36508 570 aa16.96■□□□□ 0.31
SEC16A-202ENST00000290037 C6orf163Q5TEZ5 329 aa16.96■□□□□ 0.31
SEC16A-202ENST00000290037 ZPR1O75312 459 aa16.96■□□□□ 0.3
SEC16A-202ENST00000290037 FKBP4Q02790 459 aaKnown RBP eCLIP16.96■□□□□ 0.33e-6■■■■□ 23.7
SEC16A-202ENST00000290037 SELENOOQ9BVL4 669 aa16.96■□□□□ 0.3
SEC16A-202ENST00000290037 CLCN1P35523 988 aa16.96■□□□□ 0.3
SEC16A-202ENST00000290037 SF3B2Q13435 895 aaKnown RBP16.96■□□□□ 0.3
SEC16A-202ENST00000290037 SMC5Q8IY18 1101 aa16.96■□□□□ 0.3
SEC16A-202ENST00000290037 NECTIN2Q92692 538 aa16.96■□□□□ 0.3
SEC16A-202ENST00000290037 REREQ9P2R6 1566 aa16.95■□□□□ 0.3
SEC16A-202ENST00000290037 CNNM3Q8NE01 707 aa16.95■□□□□ 0.3
SEC16A-202ENST00000290037 MCTP2Q6DN12 878 aa16.95■□□□□ 0.3
SEC16A-202ENST00000290037 ANKRD44Q8N8A2 993 aa16.95■□□□□ 0.3
SEC16A-202ENST00000290037 HLA-DOAP06340 250 aa16.95■□□□□ 0.3
SEC16A-202ENST00000290037 CCDC94Q9BW85 323 aaPredicted RBP16.95■□□□□ 0.3
SEC16A-202ENST00000290037 OPA1O60313 960 aa16.95■□□□□ 0.3
SEC16A-202ENST00000290037 NAP1L3Q99457 506 aaPredicted RBP16.95■□□□□ 0.3
SEC16A-202ENST00000290037 IL15P40933 162 aaPredicted RBP16.94■□□□□ 0.3
SEC16A-202ENST00000290037 SH3BGRP55822 239 aaPredicted RBP16.94■□□□□ 0.3
SEC16A-202ENST00000290037 RBM28Q9NW13 759 aaKnown RBP16.94■□□□□ 0.3
SEC16A-202ENST00000290037 MSH5O43196 834 aa16.94■□□□□ 0.3
SEC16A-202ENST00000290037 ARFGAP2Q8N6H7 521 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms