RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 TPTE2Q6XPS3 522 aa18.33■□□□□ 0.53
SHANK3-201ENST00000262795 MFSD6Q6ZSS7 791 aa18.33■□□□□ 0.53
SHANK3-201ENST00000262795 NOP2P46087 812 aaKnown RBP18.33■□□□□ 0.52
SHANK3-201ENST00000262795 CHD1LQ86WJ1 897 aa18.33■□□□□ 0.52
SHANK3-201ENST00000262795 SLC4A4Q9Y6R1 1079 aa18.33■□□□□ 0.52
SHANK3-201ENST00000262795 TNNI2P48788 182 aa18.33■□□□□ 0.52
SHANK3-201ENST00000262795 GSTTP1A0A1W2PQM5 241 aa18.32■□□□□ 0.52
SHANK3-201ENST00000262795 LPXNO60711 386 aa18.32■□□□□ 0.52
SHANK3-201ENST00000262795 SNRPA1P09661 255 aaKnown RBP18.32■□□□□ 0.52
SHANK3-201ENST00000262795 ISM2Q6H9L7 571 aa18.32■□□□□ 0.52
SHANK3-201ENST00000262795 TNRQ92752 1358 aa18.32■□□□□ 0.52
SHANK3-201ENST00000262795 RPGRIP1LQ68CZ1 1315 aa18.32■□□□□ 0.52
SHANK3-201ENST00000262795 IL2RBP14784 551 aa18.32■□□□□ 0.52
SHANK3-201ENST00000262795 H0YIN7 160 aa18.32■□□□□ 0.52
SHANK3-201ENST00000262795 HARSP12081 509 aaKnown RBP18.32■□□□□ 0.52
SHANK3-201ENST00000262795 CALML4Q96GE6 196 aa18.31■□□□□ 0.52
SHANK3-201ENST00000262795 RNF41Q9H4P4 317 aaPredicted RBP18.31■□□□□ 0.52
SHANK3-201ENST00000262795 GJC1P36383 396 aa18.31■□□□□ 0.52
SHANK3-201ENST00000262795 KRT85P78386 507 aa18.31■□□□□ 0.52
SHANK3-201ENST00000262795 TSHZ3Q63HK5 1081 aa18.31■□□□□ 0.52
SHANK3-201ENST00000262795 CCDC174Q6PII3 467 aa18.31■□□□□ 0.52
SHANK3-201ENST00000262795 SORBS3O60504 671 aa18.31■□□□□ 0.52
SHANK3-201ENST00000262795 IVNS1ABPQ9Y6Y0 642 aa18.31■□□□□ 0.52
SHANK3-201ENST00000262795 TDRD12Q587J7 1177 aaKnown RBP18.31■□□□□ 0.52
SHANK3-201ENST00000262795 MIGA1Q8NAN2 632 aa18.31■□□□□ 0.52
SHANK3-201ENST00000262795 LRRC9Q6ZRR7 1453 aa18.31■□□□□ 0.52
SHANK3-201ENST00000262795 MVPQ14764 893 aaKnown RBP18.31■□□□□ 0.52
SHANK3-201ENST00000262795 SLC26A6Q9BXS9 759 aa18.3■□□□□ 0.52
SHANK3-201ENST00000262795 DBF4Q9UBU7 674 aaPredicted RBP18.3■□□□□ 0.52
SHANK3-201ENST00000262795 BACH1O14867 736 aa18.3■□□□□ 0.52
SHANK3-201ENST00000262795 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.3■□□□□ 0.527e-7■■■□□ 16.5
SHANK3-201ENST00000262795 DYDC1Q8WWB3 177 aa18.3■□□□□ 0.52
SHANK3-201ENST00000262795 KIF5BP33176 963 aa18.3■□□□□ 0.52
SHANK3-201ENST00000262795 PRPF4BQ13523 1007 aaKnown RBP18.3■□□□□ 0.52
SHANK3-201ENST00000262795 FAM47CQ5HY64 1035 aa18.3■□□□□ 0.52
SHANK3-201ENST00000262795 NAA16Q6N069 864 aaPredicted RBP18.3■□□□□ 0.52
SHANK3-201ENST00000262795 ZNF710Q8N1W2 664 aa18.3■□□□□ 0.52
SHANK3-201ENST00000262795 MKRN3Q13064 507 aaKnown RBP18.3■□□□□ 0.52
SHANK3-201ENST00000262795 CPLX3Q8WVH0 158 aa18.3■□□□□ 0.52
SHANK3-201ENST00000262795 C8orf76Q96K31 380 aa18.3■□□□□ 0.52
SHANK3-201ENST00000262795 FKBP15Q5T1M5 1219 aa18.29■□□□□ 0.52
SHANK3-201ENST00000262795 ERCC4Q92889 916 aaPredicted RBP18.29■□□□□ 0.52
SHANK3-201ENST00000262795 CCDC66A2RUB6 948 aa18.29■□□□□ 0.52
SHANK3-201ENST00000262795 UBE4AQ14139 1066 aa18.29■□□□□ 0.52
SHANK3-201ENST00000262795 KRT32Q14532 448 aa18.29■□□□□ 0.52
SHANK3-201ENST00000262795 SBNO2Q9Y2G9 1366 aa18.29■□□□□ 0.52
SHANK3-201ENST00000262795 CCDC196A0A1B0GTZ2 297 aa18.29■□□□□ 0.52
SHANK3-201ENST00000262795 CCDC40Q4G0X9 1142 aa18.29■□□□□ 0.52
SHANK3-201ENST00000262795 UFL1O94874 794 aa18.29■□□□□ 0.52
SHANK3-201ENST00000262795 CNBD1Q8NA66 436 aa18.29■□□□□ 0.52
SHANK3-201ENST00000262795 TCP10Q12799 353 aa18.28■□□□□ 0.52
SHANK3-201ENST00000262795 GRPEL1Q9HAV7 217 aa18.28■□□□□ 0.52
SHANK3-201ENST00000262795 C11orf95C9JLR9 678 aaPredicted RBP18.28■□□□□ 0.52
SHANK3-201ENST00000262795 IFIT1BQ5T764 474 aaKnown RBP18.28■□□□□ 0.52
SHANK3-201ENST00000262795 SKAP1Q86WV1 359 aa18.28■□□□□ 0.52
SHANK3-201ENST00000262795 XAGE3Q8WTP9 111 aa18.28■□□□□ 0.52
SHANK3-201ENST00000262795 UIMC1Q96RL1 719 aa18.28■□□□□ 0.52
SHANK3-201ENST00000262795 HECW1Q76N89 1606 aa18.28■□□□□ 0.52
SHANK3-201ENST00000262795 NFATC2IPQ8NCF5 419 aa18.28■□□□□ 0.52
SHANK3-201ENST00000262795 SERPINA10Q9UK55 444 aa18.28■□□□□ 0.52
SHANK3-201ENST00000262795 TTF1Q15361 905 aaPredicted RBP18.27■□□□□ 0.52
SHANK3-201ENST00000262795 CHST3Q7LGC8 479 aa18.27■□□□□ 0.52
SHANK3-201ENST00000262795 CHPF2Q9P2E5 772 aa18.27■□□□□ 0.52
SHANK3-201ENST00000262795 TBCAO75347 108 aaKnown RBP18.27■□□□□ 0.52
SHANK3-201ENST00000262795 SMCR8Q8TEV9 937 aaPredicted RBP18.27■□□□□ 0.52
SHANK3-201ENST00000262795 LETM1O95202 739 aaPredicted RBP18.27■□□□□ 0.52
SHANK3-201ENST00000262795 KIF22Q14807 665 aa18.27■□□□□ 0.52
SHANK3-201ENST00000262795 CFAP100Q494V2 611 aa18.27■□□□□ 0.52
SHANK3-201ENST00000262795 EYA3Q99504 573 aa18.27■□□□□ 0.52
SHANK3-201ENST00000262795 PI4KAP2A4QPH2 592 aa18.27■□□□□ 0.51
SHANK3-201ENST00000262795 PI4KAP1Q8N8J0 262 aa18.27■□□□□ 0.51
SHANK3-201ENST00000262795 GPATCH11Q8N954 259 aa18.27■□□□□ 0.51
SHANK3-201ENST00000262795 ZHX1Q9UKY1 873 aaPredicted RBP18.27■□□□□ 0.51
SHANK3-201ENST00000262795 ABT1Q9ULW3 272 aaKnown RBP18.27■□□□□ 0.51
SHANK3-201ENST00000262795 DPY19L2Q6NUT2 758 aa18.26■□□□□ 0.51
SHANK3-201ENST00000262795 ANKRD13DQ6ZTN6 518 aa18.26■□□□□ 0.51
SHANK3-201ENST00000262795 CCDC117Q8IWD4 279 aaPredicted RBP18.26■□□□□ 0.51
SHANK3-201ENST00000262795 BCCIPQ9P287 314 aaKnown RBP eCLIP18.26■□□□□ 0.51
SHANK3-201ENST00000262795 MX1P20591 662 aa18.26■□□□□ 0.51
SHANK3-201ENST00000262795 HOOK3Q86VS8 718 aa18.26■□□□□ 0.51
SHANK3-201ENST00000262795 TXLNBQ8N3L3 684 aa18.26■□□□□ 0.51
SHANK3-201ENST00000262795 TRERF1Q96PN7 1200 aa18.26■□□□□ 0.51
SHANK3-201ENST00000262795 LEKR1Q6ZMV7 388 aa18.26■□□□□ 0.51
SHANK3-201ENST00000262795 COPS6Q7L5N1 327 aa18.26■□□□□ 0.51
SHANK3-201ENST00000262795 UPF3BQ9BZI7 483 aaKnown RBP18.26■□□□□ 0.51
SHANK3-201ENST00000262795 DENND4BO75064 1496 aaPredicted RBP18.26■□□□□ 0.51
SHANK3-201ENST00000262795 CFAP45Q9UL16 551 aa18.25■□□□□ 0.51
SHANK3-201ENST00000262795 STK25O00506 426 aa18.25■□□□□ 0.51
SHANK3-201ENST00000262795 SPA17Q15506 151 aa18.25■□□□□ 0.51
SHANK3-201ENST00000262795 ZGPATQ8N5A5 531 aaKnown RBP18.25■□□□□ 0.51
SHANK3-201ENST00000262795 CCDC87Q9NVE4 849 aa18.25■□□□□ 0.51
SHANK3-201ENST00000262795 ADGRF5Q8IZF2 1346 aa18.25■□□□□ 0.51
SHANK3-201ENST00000262795 CCDC12Q8WUD4 166 aaPredicted RBP18.25■□□□□ 0.51
SHANK3-201ENST00000262795 ATF5Q9Y2D1 282 aaPredicted RBP18.25■□□□□ 0.51
SHANK3-201ENST00000262795 MCM2P49736 904 aa18.24■□□□□ 0.51
SHANK3-201ENST00000262795 FILIP1Q7Z7B0 1213 aa18.24■□□□□ 0.51
SHANK3-201ENST00000262795 PAGR1Q9BTK6 254 aa18.24■□□□□ 0.51
SHANK3-201ENST00000262795 TCP11L1Q9NUJ3 509 aa18.24■□□□□ 0.51
SHANK3-201ENST00000262795 MTIF2P46199 727 aaKnown RBP18.24■□□□□ 0.51
SHANK3-201ENST00000262795 CASKIN1Q8WXD9 1431 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms