RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 TEX13AQ9BXU3 409 aaPredicted RBP13.43□□□□□ -0.26
NOD1-201ENST00000222823 KIAA1210Q9ULL0 1709 aa13.43□□□□□ -0.26
NOD1-201ENST00000222823 GOLIM4O00461 696 aa13.43□□□□□ -0.26
NOD1-201ENST00000222823 SNRPA1P09661 255 aaKnown RBP13.43□□□□□ -0.26
NOD1-201ENST00000222823 CHRNA2Q15822 529 aa13.43□□□□□ -0.26
NOD1-201ENST00000222823 CCDC183Q5T5S1 534 aa13.43□□□□□ -0.26
NOD1-201ENST00000222823 SNRKQ9NRH2 765 aa13.43□□□□□ -0.26
NOD1-201ENST00000222823 RANBP6O60518 1105 aaKnown RBP13.42□□□□□ -0.26
NOD1-201ENST00000222823 ANKRD13DQ6ZTN6 518 aa13.42□□□□□ -0.26
NOD1-201ENST00000222823 RHPN1Q8TCX5 695 aa13.42□□□□□ -0.26
NOD1-201ENST00000222823 TMOD2Q9NZR1 351 aa13.42□□□□□ -0.26
NOD1-201ENST00000222823 ANO10Q9NW15 660 aa13.42□□□□□ -0.26
NOD1-201ENST00000222823 CWC25Q9NXE8 425 aaPredicted RBP13.42□□□□□ -0.26
NOD1-201ENST00000222823 SDSP20132 328 aa13.42□□□□□ -0.26
NOD1-201ENST00000222823 DZIP1Q86YF9 867 aaKnown RBP13.42□□□□□ -0.26
NOD1-201ENST00000222823 RNF41Q9H4P4 317 aaPredicted RBP13.41□□□□□ -0.26
NOD1-201ENST00000222823 IFIT3O14879 490 aaKnown RBP13.41□□□□□ -0.26
NOD1-201ENST00000222823 CCT2P78371 535 aaKnown RBP13.41□□□□□ -0.26
NOD1-201ENST00000222823 AXDND1Q5T1B0 1012 aaPredicted RBP13.41□□□□□ -0.26
NOD1-201ENST00000222823 ANKIB1Q9P2G1 1089 aa13.41□□□□□ -0.26
NOD1-201ENST00000222823 SLC12A7Q9Y666 1083 aa13.41□□□□□ -0.26
NOD1-201ENST00000222823 ZNF76P36508 570 aa13.41□□□□□ -0.26
NOD1-201ENST00000222823 EIF5P55010 431 aaKnown RBP13.41□□□□□ -0.26
NOD1-201ENST00000222823 TXLNBQ8N3L3 684 aa13.41□□□□□ -0.26
NOD1-201ENST00000222823 GDPD2Q9HCC8 539 aa13.41□□□□□ -0.26
NOD1-201ENST00000222823 CCDC181Q5TID7 509 aa13.41□□□□□ -0.26
NOD1-201ENST00000222823 CEP85Q6P2H3 762 aa13.41□□□□□ -0.26
NOD1-201ENST00000222823 PLEKHM2Q8IWE5 1019 aa13.41□□□□□ -0.26
NOD1-201ENST00000222823 TFIP11Q9UBB9 837 aaKnown RBP13.41□□□□□ -0.26
NOD1-201ENST00000222823 FLT4P35916 1363 aa13.41□□□□□ -0.26
NOD1-201ENST00000222823 NCKAP5LQ9HCH0 1330 aa13.4□□□□□ -0.26
NOD1-201ENST00000222823 SFPQP23246 707 aaKnown RBP eCLIP13.4□□□□□ -0.26
NOD1-201ENST00000222823 SIRT1Q96EB6 747 aa13.4□□□□□ -0.26
NOD1-201ENST00000222823 GOLGA8BA8MQT2 603 aa13.4□□□□□ -0.26
NOD1-201ENST00000222823 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.4□□□□□ -0.262e-14■■■■■ 248.4
NOD1-201ENST00000222823 EPB41L2O43491 1005 aaKnown RBP13.39□□□□□ -0.27
NOD1-201ENST00000222823 STX6O43752 255 aa13.39□□□□□ -0.27
NOD1-201ENST00000222823 NGLY1Q96IV0 654 aa13.39□□□□□ -0.27
NOD1-201ENST00000222823 GLI2P10070 1586 aa13.39□□□□□ -0.27
NOD1-201ENST00000222823 BAG4O95429 457 aaKnown RBP13.39□□□□□ -0.27
NOD1-201ENST00000222823 SKIDA1Q1XH10 827 aa13.39□□□□□ -0.27
NOD1-201ENST00000222823 ARHGAP29Q52LW3 1261 aa13.39□□□□□ -0.27
NOD1-201ENST00000222823 WWC2Q6AWC2 1192 aa13.39□□□□□ -0.27
NOD1-201ENST00000222823 ZNF444Q8N0Y2 327 aaPredicted RBP13.39□□□□□ -0.27
NOD1-201ENST00000222823 JARID2Q92833 1246 aaPredicted RBP13.39□□□□□ -0.27
NOD1-201ENST00000222823 SEC63Q9UGP8 760 aaKnown RBP13.39□□□□□ -0.27
NOD1-201ENST00000222823 ATP7BP35670 1465 aa13.39□□□□□ -0.27
NOD1-201ENST00000222823 QRICH2Q9H0J4 1663 aa13.39□□□□□ -0.27
NOD1-201ENST00000222823 PDE1AP54750 535 aa13.39□□□□□ -0.27
NOD1-201ENST00000222823 KLHL10Q6JEL2 608 aa13.39□□□□□ -0.27
NOD1-201ENST00000222823 CKAP2LQ8IYA6 745 aa13.39□□□□□ -0.27
NOD1-201ENST00000222823 CRACR2BQ8N4Y2 399 aaPredicted RBP13.39□□□□□ -0.27
NOD1-201ENST00000222823 CHPF2Q9P2E5 772 aa13.39□□□□□ -0.27
NOD1-201ENST00000222823 KIF24Q5T7B8 1368 aa13.38□□□□□ -0.27
NOD1-201ENST00000222823 GOLGA8AA7E2F4 631 aa13.38□□□□□ -0.27
NOD1-201ENST00000222823 CHL1O00533 1208 aa13.38□□□□□ -0.27
NOD1-201ENST00000222823 MPHOSPH10O00566 681 aaKnown RBP13.38□□□□□ -0.27
NOD1-201ENST00000222823 MTHFSDQ2M296 383 aaKnown RBP13.38□□□□□ -0.27
NOD1-201ENST00000222823 ABCC4O15439 1325 aa13.38□□□□□ -0.27
NOD1-201ENST00000222823 RAB3GAP1Q15042 981 aa13.38□□□□□ -0.27
NOD1-201ENST00000222823 KRT24Q2M2I5 525 aa13.38□□□□□ -0.27
NOD1-201ENST00000222823 NEK1Q96PY6 1258 aa13.38□□□□□ -0.27
NOD1-201ENST00000222823 USP16Q9Y5T5 823 aa13.38□□□□□ -0.27
NOD1-201ENST00000222823 PPRC1Q5VV67 1664 aaKnown RBP13.38□□□□□ -0.27
NOD1-201ENST00000222823 UQCRHLA0A096LP55 91 aa13.38□□□□□ -0.27
NOD1-201ENST00000222823 UQCRHP07919 91 aa13.38□□□□□ -0.27
NOD1-201ENST00000222823 GJB2P29033 226 aa13.38□□□□□ -0.27
NOD1-201ENST00000222823 KLHL40Q2TBA0 621 aa13.38□□□□□ -0.27
NOD1-201ENST00000222823 COPS6Q7L5N1 327 aa13.38□□□□□ -0.27
NOD1-201ENST00000222823 CTAGE5O15320 804 aa13.37□□□□□ -0.27
NOD1-201ENST00000222823 ERLIN1O75477 346 aa13.37□□□□□ -0.27
NOD1-201ENST00000222823 HAND2P61296 217 aa13.37□□□□□ -0.27
NOD1-201ENST00000222823 C16orf71Q8IYS4 520 aaPredicted RBP13.37□□□□□ -0.27
NOD1-201ENST00000222823 CDC5LQ99459 802 aaKnown RBP13.37□□□□□ -0.27
NOD1-201ENST00000222823 DDX19AQ9NUU7 478 aaKnown RBP13.37□□□□□ -0.27
NOD1-201ENST00000222823 AATKQ6ZMQ8 1374 aa13.37□□□□□ -0.27
NOD1-201ENST00000222823 TTF1Q15361 905 aaPredicted RBP13.37□□□□□ -0.27
NOD1-201ENST00000222823 H0YHG0 523 aa13.37□□□□□ -0.27
NOD1-201ENST00000222823 ERLIN2O94905 339 aa13.37□□□□□ -0.27
NOD1-201ENST00000222823 XAGE3Q8WTP9 111 aa13.37□□□□□ -0.27
NOD1-201ENST00000222823 HMG20BQ9P0W2 317 aa13.37□□□□□ -0.27
NOD1-201ENST00000222823 XRCC6P12956 609 aaKnown RBP eCLIP13.37□□□□□ -0.27
NOD1-201ENST00000222823 IARSP41252 1262 aaKnown RBP13.37□□□□□ -0.27
NOD1-201ENST00000222823 FSIP1Q8NA03 581 aa13.37□□□□□ -0.27
NOD1-201ENST00000222823 CWC15Q9P013 229 aaKnown RBP13.37□□□□□ -0.27
NOD1-201ENST00000222823 ORC3Q9UBD5 711 aaPredicted RBP13.37□□□□□ -0.27
NOD1-201ENST00000222823 FAM135BQ49AJ0 1406 aa13.36□□□□□ -0.27
NOD1-201ENST00000222823 UBXN4Q92575 508 aa13.36□□□□□ -0.27
NOD1-201ENST00000222823 PHAXQ9H814 394 aaKnown RBP13.36□□□□□ -0.27
NOD1-201ENST00000222823 USP25Q9UHP3 1055 aa13.36□□□□□ -0.27
NOD1-201ENST00000222823 DDX46Q7L014 1031 aaKnown RBP13.36□□□□□ -0.27
NOD1-201ENST00000222823 MAP3K19Q56UN5 1328 aa13.36□□□□□ -0.27
NOD1-201ENST00000222823 SLC39A6Q13433 755 aa13.36□□□□□ -0.27
NOD1-201ENST00000222823 NEURL4Q96JN8 1562 aa13.35□□□□□ -0.27
NOD1-201ENST00000222823 ALDH1L1O75891 902 aa13.35□□□□□ -0.27
NOD1-201ENST00000222823 SSRP1Q08945 709 aaKnown RBP13.35□□□□□ -0.27
NOD1-201ENST00000222823 CCDC194A0A1B0GVG4 234 aa13.35□□□□□ -0.27
NOD1-201ENST00000222823 ATP8B2P98198 1209 aa13.35□□□□□ -0.27
NOD1-201ENST00000222823 CATIPQ7Z7H3 387 aa13.35□□□□□ -0.27
NOD1-201ENST00000222823 MICU3Q86XE3 530 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 205.6 ms