RNA–Protein interactions for RNA: ENST00000217244.7

CSNK2A1-201, Transcript of casein kinase 2 alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK2A1, Length 4,416 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-201ENST00000217244 BRF1Q92994 677 aa10.23□□□□□ -0.77
CSNK2A1-201ENST00000217244 LIMCH1Q9UPQ0 1083 aa10.23□□□□□ -0.77
CSNK2A1-201ENST00000217244 ATP6V1AP38606 617 aa10.23□□□□□ -0.77
CSNK2A1-201ENST00000217244 LRP2BPQ9P2M1 347 aa10.23□□□□□ -0.77
CSNK2A1-201ENST00000217244 ZC3H13Q5T200 1668 aaKnown RBP10.23□□□□□ -0.77
CSNK2A1-201ENST00000217244 NUP133Q8WUM0 1156 aa10.23□□□□□ -0.77
CSNK2A1-201ENST00000217244 NEURL1BA8MQ27 555 aa10.22□□□□□ -0.77
CSNK2A1-201ENST00000217244 METTL22Q9BUU2 404 aaPredicted RBP10.22□□□□□ -0.77
CSNK2A1-201ENST00000217244 RAI14Q9P0K7 980 aa10.22□□□□□ -0.77
CSNK2A1-201ENST00000217244 MINDY4BA8MYZ0 360 aa10.22□□□□□ -0.77
CSNK2A1-201ENST00000217244 UBAP1LF5GYI3 381 aa10.22□□□□□ -0.77
CSNK2A1-201ENST00000217244 LRRFIP1Q32MZ4 808 aaKnown RBP10.22□□□□□ -0.77
CSNK2A1-201ENST00000217244 NCBP3Q53F19 620 aaKnown RBP10.22□□□□□ -0.77
CSNK2A1-201ENST00000217244 TMEM131LA2VDJ0 1609 aa10.22□□□□□ -0.77
CSNK2A1-201ENST00000217244 XRCC6P12956 609 aaKnown RBP eCLIP10.22□□□□□ -0.77
CSNK2A1-201ENST00000217244 PTH1RQ03431 593 aa10.22□□□□□ -0.77
CSNK2A1-201ENST00000217244 KIAA2012Q0VF49 1180 aa10.22□□□□□ -0.77
CSNK2A1-201ENST00000217244 DDB1Q16531 1140 aa10.22□□□□□ -0.77
CSNK2A1-201ENST00000217244 SYNE3Q6ZMZ3 975 aa10.22□□□□□ -0.77
CSNK2A1-201ENST00000217244 RASSF8Q8NHQ8 419 aa10.22□□□□□ -0.77
CSNK2A1-201ENST00000217244 SSH3Q8TE77 659 aa10.22□□□□□ -0.77
CSNK2A1-201ENST00000217244 CSPP1Q1MSJ5 1256 aa10.21□□□□□ -0.77
CSNK2A1-201ENST00000217244 WWC3Q9ULE0 1092 aa10.21□□□□□ -0.77
CSNK2A1-201ENST00000217244 CNPY2Q9Y2B0 182 aa10.21□□□□□ -0.77
CSNK2A1-201ENST00000217244 PPLO60437 1756 aa10.21□□□□□ -0.77
CSNK2A1-201ENST00000217244 KIF13AQ9H1H9 1805 aa10.21□□□□□ -0.77
CSNK2A1-201ENST00000217244 KIF3AQ9Y496 699 aa10.21□□□□□ -0.77
CSNK2A1-201ENST00000217244 BECN2A8MW95 431 aa10.21□□□□□ -0.78
CSNK2A1-201ENST00000217244 EPHA10Q5JZY3 1008 aa10.21□□□□□ -0.78
CSNK2A1-201ENST00000217244 CKAP2LQ8IYA6 745 aa10.21□□□□□ -0.78
CSNK2A1-201ENST00000217244 SYNE4Q8N205 404 aa10.21□□□□□ -0.78
CSNK2A1-201ENST00000217244 SNX21Q969T3 373 aa10.21□□□□□ -0.78
CSNK2A1-201ENST00000217244 MYO5BQ9ULV0 1848 aa10.21□□□□□ -0.78
CSNK2A1-201ENST00000217244 RXRAP19793 462 aa10.21□□□□□ -0.78
CSNK2A1-201ENST00000217244 BRINP3Q76B58 766 aa10.21□□□□□ -0.78
CSNK2A1-201ENST00000217244 TDO2P48775 406 aa10.2□□□□□ -0.78
CSNK2A1-201ENST00000217244 LRRC24Q50LG9 513 aa10.2□□□□□ -0.78
CSNK2A1-201ENST00000217244 DZIP3Q86Y13 1208 aaKnown RBP10.2□□□□□ -0.78
CSNK2A1-201ENST00000217244 RASEFQ8IZ41 740 aa10.2□□□□□ -0.78
CSNK2A1-201ENST00000217244 SDF4Q9BRK5 362 aa10.2□□□□□ -0.78
CSNK2A1-201ENST00000217244 PUS3Q9BZE2 481 aaKnown RBP10.2□□□□□ -0.78
CSNK2A1-201ENST00000217244 SIGLEC1Q9BZZ2 1709 aa10.2□□□□□ -0.78
CSNK2A1-201ENST00000217244 ANKRD18BA2A2Z9 1011 aa10.2□□□□□ -0.78
CSNK2A1-201ENST00000217244 CHGBP05060 677 aa10.2□□□□□ -0.78
CSNK2A1-201ENST00000217244 AKAP17AQ02040 695 aaKnown RBP10.2□□□□□ -0.78
CSNK2A1-201ENST00000217244 CPLX2Q6PUV4 134 aaKnown RBP10.2□□□□□ -0.78
CSNK2A1-201ENST00000217244 AEBP2Q6ZN18 517 aaPredicted RBP10.2□□□□□ -0.78
CSNK2A1-201ENST00000217244 AIDAQ96BJ3 306 aa10.2□□□□□ -0.78
CSNK2A1-201ENST00000217244 IQSEC2Q5JU85 1478 aa10.2□□□□□ -0.78
CSNK2A1-201ENST00000217244 DHX16O60231 1041 aaKnown RBP10.2□□□□□ -0.78
CSNK2A1-201ENST00000217244 TAF5LO75529 589 aa10.2□□□□□ -0.78
CSNK2A1-201ENST00000217244 ME1P48163 572 aa10.2□□□□□ -0.78
CSNK2A1-201ENST00000217244 ZNF219Q9P2Y4 722 aaPredicted RBP10.2□□□□□ -0.78
CSNK2A1-201ENST00000217244 STX6O43752 255 aa10.19□□□□□ -0.78
CSNK2A1-201ENST00000217244 RAB3GAP1Q15042 981 aa10.19□□□□□ -0.78
CSNK2A1-201ENST00000217244 FAM98CQ17RN3 349 aaKnown RBP10.19□□□□□ -0.78
CSNK2A1-201ENST00000217244 CREB3L3Q68CJ9 461 aa10.19□□□□□ -0.78
CSNK2A1-201ENST00000217244 SMIM5Q71RC9 77 aa10.19□□□□□ -0.78
CSNK2A1-201ENST00000217244 KLHL34Q8N239 644 aa10.19□□□□□ -0.78
CSNK2A1-201ENST00000217244 NIP7Q9Y221 180 aaKnown RBP eCLIP10.19□□□□□ -0.78
CSNK2A1-201ENST00000217244 PCDH11XQ9BZA7 1347 aa10.19□□□□□ -0.78
CSNK2A1-201ENST00000217244 PCDH11YQ9BZA8 1340 aa10.19□□□□□ -0.78
CSNK2A1-201ENST00000217244 A0A0D9SFI3 127 aa10.19□□□□□ -0.78
CSNK2A1-201ENST00000217244 A0A1B0GUL7 405 aa10.19□□□□□ -0.78
CSNK2A1-201ENST00000217244 SGSM2O43147 1006 aa10.19□□□□□ -0.78
CSNK2A1-201ENST00000217244 SNX14Q9Y5W7 946 aa10.19□□□□□ -0.78
CSNK2A1-201ENST00000217244 SNAP23O00161 211 aa10.19□□□□□ -0.78
CSNK2A1-201ENST00000217244 BRPF1P55201 1214 aaPredicted RBP10.19□□□□□ -0.78
CSNK2A1-201ENST00000217244 DNM1Q05193 864 aaKnown RBP10.19□□□□□ -0.78
CSNK2A1-201ENST00000217244 TRIM29Q14134 588 aa10.19□□□□□ -0.78
CSNK2A1-201ENST00000217244 ATP2B3Q16720 1220 aa10.19□□□□□ -0.78
CSNK2A1-201ENST00000217244 IRS4O14654 1257 aaPredicted RBP10.19□□□□□ -0.78
CSNK2A1-201ENST00000217244 MBD3O95983 291 aa10.19□□□□□ -0.78
CSNK2A1-201ENST00000217244 IGHMBP2P38935 993 aaKnown RBP10.19□□□□□ -0.78
CSNK2A1-201ENST00000217244 TNNI3KQ59H18 835 aa10.19□□□□□ -0.78
CSNK2A1-201ENST00000217244 SPATA32Q96LK8 384 aa10.19□□□□□ -0.78
CSNK2A1-201ENST00000217244 NEK1Q96PY6 1258 aa10.19□□□□□ -0.78
CSNK2A1-201ENST00000217244 FPGT-TNNI3KV9GXZ4 949 aa10.19□□□□□ -0.78
CSNK2A1-201ENST00000217244 GOLGA6L19H0YKK7 550 aa10.18□□□□□ -0.78
CSNK2A1-201ENST00000217244 KRT85P78386 507 aa10.18□□□□□ -0.78
CSNK2A1-201ENST00000217244 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.18□□□□□ -0.78
CSNK2A1-201ENST00000217244 TSPY26PQ9H489 355 aa10.18□□□□□ -0.78
CSNK2A1-201ENST00000217244 OVOS2A0A0J9YW53 1432 aa10.18□□□□□ -0.78
CSNK2A1-201ENST00000217244 OVOS2Q6IE36 1432 aa10.18□□□□□ -0.78
CSNK2A1-201ENST00000217244 POLR3DP05423 398 aaPredicted RBP10.18□□□□□ -0.78
CSNK2A1-201ENST00000217244 ADCK5Q3MIX3 580 aa10.18□□□□□ -0.78
CSNK2A1-201ENST00000217244 CCDC73Q6ZRK6 1079 aa10.18□□□□□ -0.78
CSNK2A1-201ENST00000217244 PLBD2Q8NHP8 589 aa10.18□□□□□ -0.78
CSNK2A1-201ENST00000217244 ANO8Q9HCE9 1232 aaPredicted RBP10.18□□□□□ -0.78
CSNK2A1-201ENST00000217244 PAG1Q9NWQ8 432 aa10.18□□□□□ -0.78
CSNK2A1-201ENST00000217244 IBTKQ9P2D0 1353 aaPredicted RBP10.18□□□□□ -0.78
CSNK2A1-201ENST00000217244 PTCH1Q13635 1447 aa10.18□□□□□ -0.78
CSNK2A1-201ENST00000217244 ERICH2A1L162 156 aa10.18□□□□□ -0.78
CSNK2A1-201ENST00000217244 GIMAP6Q6P9H5 292 aa10.18□□□□□ -0.78
CSNK2A1-201ENST00000217244 PI16Q6UXB8 463 aa10.18□□□□□ -0.78
CSNK2A1-201ENST00000217244 MICU3Q86XE3 530 aa10.18□□□□□ -0.78
CSNK2A1-201ENST00000217244 MIGA1Q8NAN2 632 aa10.18□□□□□ -0.78
CSNK2A1-201ENST00000217244 MYOM1P52179 1685 aa10.18□□□□□ -0.78
CSNK2A1-201ENST00000217244 ARHGEF28Q8N1W1 1705 aaKnown RBP10.18□□□□□ -0.78
CSNK2A1-201ENST00000217244 IGKV5-2P06315 115 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms