RNA–Protein interactions for RNA: ENSMUST00000035237.11

Usp4-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp4, Length 3,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-201ENSMUST00000035237 Pms1Q8K119 917 aa17.7■□□□□ 0.42
Usp4-201ENSMUST00000035237 Ccz1Q8C1Y8 480 aa17.7■□□□□ 0.42
Usp4-201ENSMUST00000035237 Limch1Q3UH68 1057 aa17.69■□□□□ 0.42
Usp4-201ENSMUST00000035237 TfrcQ62351 763 aaKnown RBP17.69■□□□□ 0.42
Usp4-201ENSMUST00000035237 Frat2Q8K025 231 aa17.69■□□□□ 0.42
Usp4-201ENSMUST00000035237 Atp8b3Q6UQ17 1335 aa17.69■□□□□ 0.42
Usp4-201ENSMUST00000035237 Irx2P81066 474 aa17.69■□□□□ 0.42
Usp4-201ENSMUST00000035237 Ercc6lQ8BHK9 1240 aa17.69■□□□□ 0.42
Usp4-201ENSMUST00000035237 Luzp1Q8R4U7 1068 aaKnown RBP17.69■□□□□ 0.42
Usp4-201ENSMUST00000035237 Foxp4Q9DBY0 795 aaKnown RBP17.69■□□□□ 0.42
Usp4-201ENSMUST00000035237 Uri1Q3TLD5 531 aa17.68■□□□□ 0.42
Usp4-201ENSMUST00000035237 A0A0U1RNP2 1173 aa17.68■□□□□ 0.42
Usp4-201ENSMUST00000035237 1700113H08RikE9Q9Q5 327 aa17.68■□□□□ 0.42
Usp4-201ENSMUST00000035237 Mcm6P97311 821 aa17.68■□□□□ 0.42
Usp4-201ENSMUST00000035237 Ddx46Q569Z5 1032 aaKnown RBP17.68■□□□□ 0.42
Usp4-201ENSMUST00000035237 Rps6kb1Q8BSK8 525 aa17.68■□□□□ 0.42
Usp4-201ENSMUST00000035237 Stac3Q8BZ71 360 aa17.68■□□□□ 0.42
Usp4-201ENSMUST00000035237 Osbpl5Q9ER64 874 aa17.68■□□□□ 0.42
Usp4-201ENSMUST00000035237 Znf541Q0GGX2 1363 aa17.68■□□□□ 0.42
Usp4-201ENSMUST00000035237 Lins1Q3U1D0 764 aa17.68■□□□□ 0.42
Usp4-201ENSMUST00000035237 Lrrc8aQ80WG5 810 aa17.68■□□□□ 0.42
Usp4-201ENSMUST00000035237 Tmem131lQ3U3D7 1597 aa17.67■□□□□ 0.42
Usp4-201ENSMUST00000035237 Gas2l3Q3UWW6 683 aa17.67■□□□□ 0.42
Usp4-201ENSMUST00000035237 Ccdc155Q80VJ8 648 aa17.67■□□□□ 0.42
Usp4-201ENSMUST00000035237 Gtpbp4Q99ME9 634 aaKnown RBP17.67■□□□□ 0.42
Usp4-201ENSMUST00000035237 Ccdc112A0AUP1 442 aa17.67■□□□□ 0.42
Usp4-201ENSMUST00000035237 Gnl2Q99LH1 728 aaKnown RBP17.67■□□□□ 0.42
Usp4-201ENSMUST00000035237 Bicc1Q99MQ1 977 aaKnown RBP17.67■□□□□ 0.42
Usp4-201ENSMUST00000035237 Ehbp1l1Q99MS7 1716 aa17.67■□□□□ 0.42
Usp4-201ENSMUST00000035237 Znf568E9PYI1 671 aa17.67■□□□□ 0.42
Usp4-201ENSMUST00000035237 Cplx1P63040 134 aa17.67■□□□□ 0.42
Usp4-201ENSMUST00000035237 Ap5z1Q3U829 807 aa17.67■□□□□ 0.42
Usp4-201ENSMUST00000035237 Larp1Q6ZQ58 1072 aaKnown RBP17.67■□□□□ 0.42
Usp4-201ENSMUST00000035237 Cyp2d12Q8BVD2 504 aa17.67■□□□□ 0.42
Usp4-201ENSMUST00000035237 Taf5lQ91WQ5 589 aa17.67■□□□□ 0.42
Usp4-201ENSMUST00000035237 Tubb6Q922F4 447 aa17.67■□□□□ 0.42
Usp4-201ENSMUST00000035237 Fndc1E9Q043 1732 aa17.66■□□□□ 0.42
Usp4-201ENSMUST00000035237 Kansl3A2RSY1 903 aaKnown RBP17.66■□□□□ 0.42
Usp4-201ENSMUST00000035237 4930504O13RikQ8C5Z9 145 aa17.66■□□□□ 0.42
Usp4-201ENSMUST00000035237 NefhP19246 1090 aa17.66■□□□□ 0.42
Usp4-201ENSMUST00000035237 Mtmr3Q8K296 1196 aa17.66■□□□□ 0.42
Usp4-201ENSMUST00000035237 Clstn1Q9EPL2 979 aa17.66■□□□□ 0.42
Usp4-201ENSMUST00000035237 Srek1Q8BZX4 494 aaKnown RBP17.66■□□□□ 0.42
Usp4-201ENSMUST00000035237 Rhot2Q8JZN7 620 aa17.66■□□□□ 0.42
Usp4-201ENSMUST00000035237 Pcdhb15Q91Y04 786 aa17.66■□□□□ 0.42
Usp4-201ENSMUST00000035237 Rbm33Q9CXK9 1231 aaKnown RBP17.66■□□□□ 0.42
Usp4-201ENSMUST00000035237 Aox1O54754 1333 aa17.65■□□□□ 0.42
Usp4-201ENSMUST00000035237 Samsn1P57725 372 aa17.65■□□□□ 0.42
Usp4-201ENSMUST00000035237 Ltv1Q6NSQ7 470 aaKnown RBP17.65■□□□□ 0.42
Usp4-201ENSMUST00000035237 Gigyf1Q99MR1 1044 aaKnown RBP17.65■□□□□ 0.42
Usp4-201ENSMUST00000035237 PzpQ61838 1495 aa17.65■□□□□ 0.42
Usp4-201ENSMUST00000035237 Eef2kO08796 724 aa17.65■□□□□ 0.42
Usp4-201ENSMUST00000035237 Ccdc158Q8CDI6 1109 aa17.65■□□□□ 0.42
Usp4-201ENSMUST00000035237 Lmbr1lQ9D1E5 489 aa17.65■□□□□ 0.42
Usp4-201ENSMUST00000035237 1700006A11RikB9EHI3 544 aa17.65■□□□□ 0.42
Usp4-201ENSMUST00000035237 GpkowQ56A08 488 aa17.65■□□□□ 0.42
Usp4-201ENSMUST00000035237 Ppp1r10Q80W00 888 aaKnown RBP17.65■□□□□ 0.42
Usp4-201ENSMUST00000035237 Pnpla2Q8BJ56 486 aa17.65■□□□□ 0.42
Usp4-201ENSMUST00000035237 Kcnk13Q8R1P5 405 aa17.65■□□□□ 0.42
Usp4-201ENSMUST00000035237 Odf2lQ9D478 642 aa17.65■□□□□ 0.42
Usp4-201ENSMUST00000035237 Eif3aP23116 1344 aaKnown RBP17.64■□□□□ 0.42
Usp4-201ENSMUST00000035237 Phf23Q8BSN5 401 aa17.64■□□□□ 0.41
Usp4-201ENSMUST00000035237 Add2Q9QYB8 725 aa17.64■□□□□ 0.41
Usp4-201ENSMUST00000035237 Gabpb2P81069 414 aa17.64■□□□□ 0.41
Usp4-201ENSMUST00000035237 Mrpl44Q9CY73 333 aaKnown RBP17.64■□□□□ 0.41
Usp4-201ENSMUST00000035237 PtprmP28828 1452 aa17.64■□□□□ 0.41
Usp4-201ENSMUST00000035237 Rbbp8nlA2ABX0 614 aa17.63■□□□□ 0.41
Usp4-201ENSMUST00000035237 Gm10471E9Q1C7 252 aa17.63■□□□□ 0.41
Usp4-201ENSMUST00000035237 Znf326O88291 580 aa17.63■□□□□ 0.41
Usp4-201ENSMUST00000035237 Arhgef1Q61210 920 aaKnown RBP17.63■□□□□ 0.41
Usp4-201ENSMUST00000035237 Spty2d1Q68FG3 682 aa17.63■□□□□ 0.41
Usp4-201ENSMUST00000035237 Fez2Q6TYB5 348 aa17.63■□□□□ 0.41
Usp4-201ENSMUST00000035237 Abca9Q8K449 1623 aa17.63■□□□□ 0.41
Usp4-201ENSMUST00000035237 Astn2Q80Z10 1352 aa17.63■□□□□ 0.41
Usp4-201ENSMUST00000035237 Atp2b1G5E829 1220 aa17.63■□□□□ 0.41
Usp4-201ENSMUST00000035237 Atf5O70191 283 aa17.63■□□□□ 0.41
Usp4-201ENSMUST00000035237 Cnnm1Q0GA42 951 aa17.63■□□□□ 0.41
Usp4-201ENSMUST00000035237 Pabpn1Q8CCS6 302 aaKnown RBP17.63■□□□□ 0.41
Usp4-201ENSMUST00000035237 Nlgn1Q99K10 843 aa17.63■□□□□ 0.41
Usp4-201ENSMUST00000035237 Knl1Q66JQ7 1612 aa17.63■□□□□ 0.41
Usp4-201ENSMUST00000035237 Clec11aO88200 328 aa17.63■□□□□ 0.41
Usp4-201ENSMUST00000035237 Bend3Q6PAL0 825 aa17.63■□□□□ 0.41
Usp4-201ENSMUST00000035237 Stxbp4Q9WV89 557 aa17.63■□□□□ 0.41
Usp4-201ENSMUST00000035237 Csrnp1P59054 583 aa17.62■□□□□ 0.41
Usp4-201ENSMUST00000035237 Rufy2Q8R4C2 606 aa17.62■□□□□ 0.41
Usp4-201ENSMUST00000035237 Ddx41Q91VN6 622 aaKnown RBP17.62■□□□□ 0.41
Usp4-201ENSMUST00000035237 Cdc42bpgQ80UW5 1551 aa17.62■□□□□ 0.41
Usp4-201ENSMUST00000035237 Kiaa1210E9Q0C6 1637 aa17.62■□□□□ 0.41
Usp4-201ENSMUST00000035237 Yeats2Q3TUF7 1407 aa17.62■□□□□ 0.41
Usp4-201ENSMUST00000035237 Eif5P59325 429 aaKnown RBP17.62■□□□□ 0.41
Usp4-201ENSMUST00000035237 CtifQ6PEE2 600 aaKnown RBP17.62■□□□□ 0.41
Usp4-201ENSMUST00000035237 Dnaaf2Q8BPI1 814 aa17.62■□□□□ 0.41
Usp4-201ENSMUST00000035237 Depdc5P61460 1591 aa17.62■□□□□ 0.41
Usp4-201ENSMUST00000035237 Bag1Q60739 355 aa17.62■□□□□ 0.41
Usp4-201ENSMUST00000035237 Irf9Q61179 399 aa17.62■□□□□ 0.41
Usp4-201ENSMUST00000035237 Lrrfip2Q91WK0 415 aa17.62■□□□□ 0.41
Usp4-201ENSMUST00000035237 Rnf123Q5XPI3 1314 aa17.62■□□□□ 0.41
Usp4-201ENSMUST00000035237 Mdc1Q5PSV9 1707 aa17.62■□□□□ 0.41
Usp4-201ENSMUST00000035237 Jakmip2D3YXK0 820 aa17.61■□□□□ 0.41
Usp4-201ENSMUST00000035237 Grm8P47743 908 aa17.61■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 79.9 ms