RNA–Protein interactions for RNA: YPR103W

PRE2, Transcript of Beta 5 subunit of the 20S proteasome, yeastyeast

Gene PRE2, Length 864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE2YPR103W YER158CP40095 573 aa7.45□□□□□ -1.22
PRE2YPR103W ALG2P43636 503 aa7.45□□□□□ -1.22
PRE2YPR103W DNM1P54861 757 aa7.45□□□□□ -1.22
PRE2YPR103W MDM12Q92328 271 aa7.45□□□□□ -1.22
PRE2YPR103W SPS1P08458 490 aa7.44□□□□□ -1.22
PRE2YPR103W SEC26P41810 973 aaKnown RBP7.44□□□□□ -1.22
PRE2YPR103W GYP8P43570 497 aa7.44□□□□□ -1.22
PRE2YPR103W LSB3P43603 459 aaKnown RBP7.44□□□□□ -1.22
PRE2YPR103W ENV7Q12003 364 aa7.44□□□□□ -1.22
PRE2YPR103W NOP14Q99207 810 aaKnown RBP7.44□□□□□ -1.22
PRE2YPR103W PHR1P05066 565 aaKnown RBP RIP-Chip data7.43□□□□□ -1.22not detected
PRE2YPR103W RAD53P22216 821 aa7.43□□□□□ -1.22
PRE2YPR103W PEX6P33760 1030 aa7.43□□□□□ -1.22
PRE2YPR103W RFC5P38251 354 aa7.43□□□□□ -1.22
PRE2YPR103W YAP1801P38856 637 aa7.43□□□□□ -1.22
PRE2YPR103W TY4A-JP47023 414 aa7.43□□□□□ -1.22
PRE2YPR103W CCM1P48237 864 aaPredicted RBP7.43□□□□□ -1.22
PRE2YPR103W YGR283CP53336 341 aaPredicted RBP7.43□□□□□ -1.22
PRE2YPR103W UGO1Q03327 502 aa7.43□□□□□ -1.22
PRE2YPR103W MED7Q08278 222 aa7.43□□□□□ -1.22
PRE2YPR103W OSW2Q12202 724 aa7.43□□□□□ -1.22
PRE2YPR103W CDC48P25694 835 aaKnown RBP7.42□□□□□ -1.22
PRE2YPR103W TOS1P38288 455 aa7.42□□□□□ -1.22
PRE2YPR103W SCT1P32784 759 aa7.41□□□□□ -1.22
PRE2YPR103W CTH1P47976 325 aa7.41□□□□□ -1.22
PRE2YPR103W ORC3P54790 616 aa7.41□□□□□ -1.22
PRE2YPR103W RPL8AP17076 256 aaKnown RBP7.4□□□□□ -1.22
PRE2YPR103W APL1P27351 700 aa7.4□□□□□ -1.22
PRE2YPR103W SPC29P33419 253 aa7.4□□□□□ -1.22
PRE2YPR103W ECM21P38167 1117 aaKnown RBP7.4□□□□□ -1.22
PRE2YPR103W UTP14Q04500 899 aaKnown RBP7.4□□□□□ -1.22
PRE2YPR103W SRM1P21827 482 aa7.39□□□□□ -1.23
PRE2YPR103W EMC3P36039 253 aa7.39□□□□□ -1.23
PRE2YPR103W TFB2Q02939 513 aa7.39□□□□□ -1.23
PRE2YPR103W HSP78P33416 811 aa7.38□□□□□ -1.23
PRE2YPR103W ALO1P54783 526 aaKnown RBP7.38□□□□□ -1.23
PRE2YPR103W MSC2Q03455 724 aa7.38□□□□□ -1.23
PRE2YPR103W SIZ1Q04195 904 aa7.38□□□□□ -1.23
PRE2YPR103W YGR161W-CQ3E744 92 aa7.38□□□□□ -1.23
PRE2YPR103W CDC9P04819 755 aa7.37□□□□□ -1.23
PRE2YPR103W PUB1P32588 453 aaKnown RBP RIP-Chip data7.37□□□□□ -1.23not detected
PRE2YPR103W DSS1P39112 969 aa7.37□□□□□ -1.23
PRE2YPR103W YPR196WQ06595 470 aa7.37□□□□□ -1.23
PRE2YPR103W BRE4Q07660 1125 aa7.37□□□□□ -1.23
PRE2YPR103W ADR1P07248 1323 aa7.36□□□□□ -1.23
PRE2YPR103W VBA3P25594 458 aa7.36□□□□□ -1.23
PRE2YPR103W ATP25Q03153 612 aa7.36□□□□□ -1.23
PRE2YPR103W MTC5Q03897 1148 aa7.36□□□□□ -1.23
PRE2YPR103W RSM24Q03976 319 aa7.36□□□□□ -1.23
PRE2YPR103W KIN2P13186 1147 aaKnown RBP7.35□□□□□ -1.23
PRE2YPR103W RPC82P32349 654 aa7.35□□□□□ -1.23
PRE2YPR103W ZDS1P50111 915 aaKnown RBP7.35□□□□□ -1.23
PRE2YPR103W YLR001CQ07895 862 aa7.35□□□□□ -1.23
PRE2YPR103W MET7Q08645 548 aa7.35□□□□□ -1.23
PRE2YPR103W YDL177CQ12257 170 aa7.35□□□□□ -1.23
PRE2YPR103W CMP2P14747 604 aa7.34□□□□□ -1.23
PRE2YPR103W MTC2P34246 357 aa7.34□□□□□ -1.23
PRE2YPR103W DAM1P53267 343 aa7.34□□□□□ -1.23
PRE2YPR103W VTS1Q08831 523 aaKnown RBP RIP-Chip data7.34□□□□□ -1.23not detected
PRE2YPR103W NOT3P06102 836 aaKnown RBP7.33□□□□□ -1.24
PRE2YPR103W MPH2P0CD99 609 aa7.33□□□□□ -1.24
PRE2YPR103W SRP101P32916 621 aa7.33□□□□□ -1.24
PRE2YPR103W ETP1P38748 585 aaKnown RBP7.33□□□□□ -1.24
PRE2YPR103W INP52P50942 1183 aa7.33□□□□□ -1.24
PRE2YPR103W YNL193WP53870 558 aa7.33□□□□□ -1.24
PRE2YPR103W HDA1P53973 706 aa7.33□□□□□ -1.24
PRE2YPR103W RSC3Q06639 885 aa7.33□□□□□ -1.24
PRE2YPR103W CDA1Q06702 301 aa7.33□□□□□ -1.24
PRE2YPR103W CYC1P00044 109 aaPredicted RBP7.32□□□□□ -1.24
PRE2YPR103W GAL10P04397 699 aa7.32□□□□□ -1.24
PRE2YPR103W GSY1P23337 708 aa7.32□□□□□ -1.24
PRE2YPR103W FOL2P51601 243 aaKnown RBP7.32□□□□□ -1.24
PRE2YPR103W YNR029CP53729 429 aaKnown RBP7.32□□□□□ -1.24
PRE2YPR103W SRD1P09007 221 aa7.31□□□□□ -1.24
PRE2YPR103W PER1P25625 357 aa7.31□□□□□ -1.24
PRE2YPR103W GRX4P32642 244 aa7.31□□□□□ -1.24
PRE2YPR103W CRP1P38845 465 aaKnown RBP7.31□□□□□ -1.24
PRE2YPR103W UBP12P39538 1254 aa7.31□□□□□ -1.24
PRE2YPR103W NIT3P49954 291 aa7.31□□□□□ -1.24
PRE2YPR103W ENV11P53246 860 aa7.31□□□□□ -1.24
PRE2YPR103W PLB2Q03674 706 aa7.31□□□□□ -1.24
PRE2YPR103W DAL7P21826 554 aa7.3□□□□□ -1.24
PRE2YPR103W YCL002CP25565 263 aa7.3□□□□□ -1.24
PRE2YPR103W URA1P28272 314 aaPredicted RBP7.3□□□□□ -1.24
PRE2YPR103W STE13P33894 931 aa7.3□□□□□ -1.24
PRE2YPR103W OMA1P36163 345 aa7.3□□□□□ -1.24
PRE2YPR103W HXT16P47185 567 aa7.3□□□□□ -1.24
PRE2YPR103W LRS4Q04087 347 aaKnown RBP7.3□□□□□ -1.24
PRE2YPR103W IOC4Q04213 475 aa7.3□□□□□ -1.24
PRE2YPR103W YDR514CQ04408 483 aa7.3□□□□□ -1.24
PRE2YPR103W RFA1P22336 621 aaKnown RBP7.29□□□□□ -1.24
PRE2YPR103W TSR4P25040 408 aa7.29□□□□□ -1.24
PRE2YPR103W SFP1P32432 683 aa7.29□□□□□ -1.24
PRE2YPR103W LIP5P32875 414 aa7.29□□□□□ -1.24
PRE2YPR103W LRG1P35688 1017 aa7.29□□□□□ -1.24
PRE2YPR103W MCD4P36051 919 aa7.29□□□□□ -1.24
PRE2YPR103W ZRG8P40021 1076 aa7.29□□□□□ -1.24
PRE2YPR103W CAF16P43569 289 aa7.29□□□□□ -1.24
PRE2YPR103W RAI1P53063 387 aaKnown RBP7.29□□□□□ -1.24
PRE2YPR103W TAD1P53065 400 aa7.29□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 88.5 ms