RNA–Protein interactions for RNA: YPR010C

RPA135, Transcript of RNA polymerase I second largest subunit A135, yeastyeast

Gene RPA135, Length 3,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA135YPR010C ATG20Q07528 640 aa3.66□□□□□ -1.82
RPA135YPR010C ISA1Q07821 250 aaPredicted RBP3.66□□□□□ -1.82
RPA135YPR010C FLO11P08640 1367 aa3.66□□□□□ -1.82
RPA135YPR010C SEC20P28791 383 aa3.65□□□□□ -1.82
RPA135YPR010C SHM1P37292 490 aaPredicted RBP3.65□□□□□ -1.82
RPA135YPR010C EDS1P38073 919 aa3.65□□□□□ -1.82
RPA135YPR010C ERG7P38604 731 aa3.65□□□□□ -1.82
RPA135YPR010C TOM71P38825 639 aaKnown RBP3.65□□□□□ -1.82
RPA135YPR010C YHR219WP38900 624 aa3.65□□□□□ -1.82
RPA135YPR010C STU2P46675 888 aa3.65□□□□□ -1.82
RPA135YPR010C CSN12P47130 423 aa3.65□□□□□ -1.82
RPA135YPR010C MEH1Q02205 184 aa3.65□□□□□ -1.82
RPA135YPR010C YML037CQ03703 340 aa3.65□□□□□ -1.82
RPA135YPR010C YML082WQ04533 649 aaKnown RBP3.65□□□□□ -1.82
RPA135YPR010C VPS38Q05919 439 aa3.65□□□□□ -1.82
RPA135YPR010C YOR378WQ08902 515 aa3.65□□□□□ -1.82
RPA135YPR010C PCL8Q08966 492 aa3.65□□□□□ -1.82
RPA135YPR010C PLP2Q12017 286 aa3.65□□□□□ -1.82
RPA135YPR010C ARP6Q12509 438 aa3.65□□□□□ -1.82
RPA135YPR010C YEL077CQ3E7X8 1277 aa3.65□□□□□ -1.82
RPA135YPR010C TRX2P22803 104 aaKnown RBP3.65□□□□□ -1.82
RPA135YPR010C COQ8P27697 501 aa3.65□□□□□ -1.82
RPA135YPR010C CLB5P30283 435 aa3.65□□□□□ -1.82
RPA135YPR010C PPG1P32838 368 aa3.65□□□□□ -1.82
RPA135YPR010C PBP2P38151 413 aaKnown RBP RIP-Chip data3.65□□□□□ -1.82not detected
RPA135YPR010C CAF130P53280 1122 aaPredicted RBP3.65□□□□□ -1.82
RPA135YPR010C BUL2Q03758 920 aaKnown RBP3.65□□□□□ -1.82
RPA135YPR010C YOR059CQ08448 450 aaKnown RBP3.65□□□□□ -1.82
RPA135YPR010C ERP4Q12450 207 aa3.65□□□□□ -1.82
RPA135YPR010C RDS2P19541 446 aaKnown RBP3.65□□□□□ -1.83
RPA135YPR010C MET4P32389 672 aa3.65□□□□□ -1.83
RPA135YPR010C NPL4P33755 580 aa3.65□□□□□ -1.83
RPA135YPR010C KEL1P38853 1164 aaKnown RBP3.65□□□□□ -1.83
RPA135YPR010C RAD26P40352 1085 aa3.65□□□□□ -1.83
RPA135YPR010C TFG1P41895 735 aaPredicted RBP3.65□□□□□ -1.83
RPA135YPR010C CCM1P48237 864 aaPredicted RBP3.65□□□□□ -1.83
RPA135YPR010C ATF2P53296 535 aa3.65□□□□□ -1.83
RPA135YPR010C CWC21Q03375 135 aaKnown RBP3.65□□□□□ -1.83
RPA135YPR010C SLD5Q03406 294 aa3.65□□□□□ -1.83
RPA135YPR010C TY1B-AO13527 1196 aaKnown RBP3.64□□□□□ -1.83
RPA135YPR010C ENO1P00924 437 aaKnown RBP3.64□□□□□ -1.83
RPA135YPR010C MPH2P0CD99 609 aa3.64□□□□□ -1.83
RPA135YPR010C VMA1P17255 1071 aaKnown RBP3.64□□□□□ -1.83
RPA135YPR010C DBP5P20449 482 aaKnown RBP3.64□□□□□ -1.83
RPA135YPR010C UBC1P21734 215 aaKnown RBP3.64□□□□□ -1.83
RPA135YPR010C YDJ1P25491 409 aaKnown RBP3.64□□□□□ -1.83
RPA135YPR010C MIP6P38760 659 aaKnown RBP3.64□□□□□ -1.83
RPA135YPR010C SHC1P39000 512 aa3.64□□□□□ -1.83
RPA135YPR010C KAP123P40069 1113 aaKnown RBP3.64□□□□□ -1.83
RPA135YPR010C VTC2P43585 828 aa3.64□□□□□ -1.83
RPA135YPR010C AVT1P47082 602 aa3.64□□□□□ -1.83
RPA135YPR010C YGL138CP53122 345 aa3.64□□□□□ -1.83
RPA135YPR010C PEX8P53248 589 aa3.64□□□□□ -1.83
RPA135YPR010C CSR1Q06705 408 aaKnown RBP3.64□□□□□ -1.83
RPA135YPR010C PSR1Q07800 427 aa3.64□□□□□ -1.83
RPA135YPR010C TYW1Q08960 810 aaKnown RBP3.64□□□□□ -1.83
RPA135YPR010C RAD1P06777 1100 aa3.64□□□□□ -1.83
RPA135YPR010C APL1P27351 700 aa3.64□□□□□ -1.83
RPA135YPR010C SPT16P32558 1035 aaKnown RBP3.64□□□□□ -1.83
RPA135YPR010C SRB4P32569 687 aa3.64□□□□□ -1.83
RPA135YPR010C LTV1P34078 463 aa3.64□□□□□ -1.83
RPA135YPR010C YNL108CP53929 270 aa3.64□□□□□ -1.83
RPA135YPR010C RGA2Q06407 1009 aa3.64□□□□□ -1.83
RPA135YPR010C OPY2Q06810 360 aa3.64□□□□□ -1.83
RPA135YPR010C RUD3Q12234 484 aaKnown RBP3.64□□□□□ -1.83
RPA135YPR010C FRT1Q99332 602 aa3.64□□□□□ -1.83
RPA135YPR010C GFA1P14742 717 aaKnown RBP3.64□□□□□ -1.83
RPA135YPR010C PEP12P32854 288 aa3.64□□□□□ -1.83
RPA135YPR010C OLA1P38219 394 aaKnown RBP3.64□□□□□ -1.83
RPA135YPR010C PHO88P38264 188 aaPredicted RBP3.64□□□□□ -1.83
RPA135YPR010C YBP1P38315 674 aa3.64□□□□□ -1.83
RPA135YPR010C GTT3P39996 337 aa3.64□□□□□ -1.83
RPA135YPR010C SMC3P47037 1230 aa3.64□□□□□ -1.83
RPA135YPR010C DUS3Q06053 668 aaKnown RBP3.64□□□□□ -1.83
RPA135YPR010C YLL058WQ12198 575 aa3.64□□□□□ -1.83
RPA135YPR010C RAD18P10862 487 aa3.63□□□□□ -1.83
RPA135YPR010C CLN3P13365 580 aa3.63□□□□□ -1.83
RPA135YPR010C ALG1P16661 449 aa3.63□□□□□ -1.83
RPA135YPR010C KAR3P17119 729 aa3.63□□□□□ -1.83
RPA135YPR010C CLB1P24868 471 aa3.63□□□□□ -1.83
RPA135YPR010C TRK2P28584 889 aa3.63□□□□□ -1.83
RPA135YPR010C TGL4P36165 910 aa3.63□□□□□ -1.83
RPA135YPR010C UBP13P38187 747 aa3.63□□□□□ -1.83
RPA135YPR010C UBP14P38237 781 aaKnown RBP3.63□□□□□ -1.83
RPA135YPR010C SHQ1P40486 507 aaPredicted RBP3.63□□□□□ -1.83
RPA135YPR010C SBE2P42223 864 aaKnown RBP3.63□□□□□ -1.83
RPA135YPR010C HSH155P49955 971 aaKnown RBP3.63□□□□□ -1.83
RPA135YPR010C MTC3P53077 123 aa3.63□□□□□ -1.83
RPA135YPR010C ALD6P54115 500 aaKnown RBP3.63□□□□□ -1.83
RPA135YPR010C TGL2P54857 326 aa3.63□□□□□ -1.83
RPA135YPR010C JIP5Q06214 492 aaPredicted RBP3.63□□□□□ -1.83
RPA135YPR010C KAR1P11927 433 aa3.63□□□□□ -1.83
RPA135YPR010C VMA2P16140 517 aaKnown RBP3.63□□□□□ -1.83
RPA135YPR010C SRP54P20424 541 aaKnown RBP3.63□□□□□ -1.83
RPA135YPR010C BMH1P29311 267 aaKnown RBP3.63□□□□□ -1.83
RPA135YPR010C CCT3P39077 534 aaKnown RBP3.63□□□□□ -1.83
RPA135YPR010C MMM1P41800 426 aa3.63□□□□□ -1.83
RPA135YPR010C CUE3P53137 624 aaKnown RBP3.63□□□□□ -1.83
RPA135YPR010C YGR117CP53270 476 aa3.63□□□□□ -1.83
RPA135YPR010C ATG23Q06671 453 aa3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms