RNA–Protein interactions for RNA: YPL120W

VPS30, Transcript of Subunit of phosphatidylinositol (PtdIns) 3-kinase complexes I and II, yeast

Gene VPS30, Length 1,674 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS30	YPL120W	ROD1	Q02805	837 aa		4.97	□□□□□ -1.61
VPS30	YPL120W	RSM24	Q03976	319 aa		4.97	□□□□□ -1.61
VPS30	YPL120W	PRE9	P23638	258 aa	Known RBP	4.96	□□□□□ -1.61
VPS30	YPL120W	RAT1	Q02792	1006 aa	Known RBP	4.96	□□□□□ -1.61
VPS30	YPL120W	MCD1	Q12158	566 aa		4.96	□□□□□ -1.61
VPS30	YPL120W	TOM1	Q03280	3268 aa		4.96	□□□□□ -1.62
VPS30	YPL120W	RFC5	P38251	354 aa		4.96	□□□□□ -1.62
VPS30	YPL120W	CMP2	P14747	604 aa		4.95	□□□□□ -1.62
VPS30	YPL120W	YKL133C	P36066	463 aa		4.95	□□□□□ -1.62
VPS30	YPL120W	KIN4	Q01919	800 aa		4.95	□□□□□ -1.62
VPS30	YPL120W	PLB2	Q03674	706 aa		4.95	□□□□□ -1.62
VPS30	YPL120W	PNS1	Q12412	539 aa		4.95	□□□□□ -1.62
VPS30	YPL120W	GAL10	P04397	699 aa		4.94	□□□□□ -1.62
VPS30	YPL120W	YGR122W	P53272	402 aa		4.94	□□□□□ -1.62
VPS30	YPL120W	YPR117W	Q06116	2489 aa		4.94	□□□□□ -1.62
VPS30	YPL120W	MKK2	P32491	506 aa		4.93	□□□□□ -1.62
VPS30	YPL120W	ERT1	P38140	529 aa		4.93	□□□□□ -1.62
VPS30	YPL120W	SIW14	P53965	281 aa		4.93	□□□□□ -1.62
VPS30	YPL120W	DUS4	Q06063	367 aa		4.93	□□□□□ -1.62
VPS30	YPL120W	PAM1	P37304	830 aa	Known RBP	4.92	□□□□□ -1.62
VPS30	YPL120W	YFL054C	P43549	646 aa		4.92	□□□□□ -1.62
VPS30	YPL120W	NCS6	P53088	359 aa		4.92	□□□□□ -1.62
VPS30	YPL120W	RXT3	Q07458	294 aa		4.92	□□□□□ -1.62
VPS30	YPL120W	BUG1	Q12191	341 aa		4.92	□□□□□ -1.62
VPS30	YPL120W	YRF1-3	P0CX14	1859 aa		4.92	□□□□□ -1.62
VPS30	YPL120W	YRF1-7	P0CX15	1859 aa		4.92	□□□□□ -1.62
VPS30	YPL120W	YRF1-6	P53819	1859 aa		4.92	□□□□□ -1.62
VPS30	YPL120W	THS1	P04801	734 aa	Known RBP	4.92	□□□□□ -1.62
VPS30	YPL120W	RPS9B	P05755	195 aa	Known RBP	4.92	□□□□□ -1.62
VPS30	YPL120W	KIN2	P13186	1147 aa	Known RBP	4.92	□□□□□ -1.62
VPS30	YPL120W	DOM34	P33309	386 aa		4.92	□□□□□ -1.62
VPS30	YPL120W	RGD1	P38339	666 aa		4.92	□□□□□ -1.62
VPS30	YPL120W	RRT14	P40470	206 aa		4.92	□□□□□ -1.62
VPS30	YPL120W	MRL1	Q06815	381 aa		4.92	□□□□□ -1.62
VPS30	YPL120W	SVS1	Q12254	260 aa		4.92	□□□□□ -1.62
VPS30	YPL120W	NYV1	Q12255	253 aa		4.92	□□□□□ -1.62
VPS30	YPL120W	TY4B-H	P0C2J7	1802 aa		4.91	□□□□□ -1.62
VPS30	YPL120W	TY4B-J	P47024	1803 aa		4.91	□□□□□ -1.62
VPS30	YPL120W	YRF1-4	O13559	1382 aa		4.91	□□□□□ -1.62
VPS30	YPL120W	RAD2	P07276	1031 aa		4.91	□□□□□ -1.62
VPS30	YPL120W	SEC8	P32855	1065 aa		4.91	□□□□□ -1.62
VPS30	YPL120W	ENT3	P47160	408 aa		4.91	□□□□□ -1.62
VPS30	YPL120W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
VPS30	YPL120W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
VPS30	YPL120W	YER152C	P10356	443 aa		4.9	□□□□□ -1.62
VPS30	YPL120W	SRM1	P21827	482 aa		4.9	□□□□□ -1.62
VPS30	YPL120W	SYP1	P25623	870 aa	Known RBP	4.9	□□□□□ -1.62
VPS30	YPL120W	APL1	P27351	700 aa		4.9	□□□□□ -1.62
VPS30	YPL120W	MLS1	P30952	554 aa		4.9	□□□□□ -1.62
VPS30	YPL120W	TRM2	P33753	639 aa		4.9	□□□□□ -1.62
VPS30	YPL120W	ENP1	P38333	483 aa	Known RBP	4.9	□□□□□ -1.62
VPS30	YPL120W	PBP1	P53297	722 aa	Known RBP	4.9	□□□□□ -1.62
VPS30	YPL120W	ACK1	Q07622	623 aa	Predicted RBP	4.9	□□□□□ -1.62
VPS30	YPL120W	GPB1	Q08886	897 aa		4.9	□□□□□ -1.62
VPS30	YPL120W	CDC20	P26309	610 aa		4.89	□□□□□ -1.63
VPS30	YPL120W	RPS26A	P39938	119 aa	Known RBP	4.89	□□□□□ -1.63
VPS30	YPL120W	RPS26B	P39939	119 aa	Known RBP	4.89	□□□□□ -1.63
VPS30	YPL120W	GIS1	Q03833	894 aa		4.89	□□□□□ -1.63
VPS30	YPL120W	CNN1	P43618	361 aa		4.89	□□□□□ -1.63
VPS30	YPL120W	MCM6	P53091	1017 aa	Known RBP	4.89	□□□□□ -1.63
VPS30	YPL120W	GTF1	P53260	183 aa	Predicted RBP	4.89	□□□□□ -1.63
VPS30	YPL120W	TMA10	Q06177	86 aa		4.89	□□□□□ -1.63
VPS30	YPL120W	CYC8	P14922	966 aa		4.88	□□□□□ -1.63
VPS30	YPL120W	HCM1	P25364	564 aa		4.88	□□□□□ -1.63
VPS30	YPL120W	SLD2	P34252	453 aa		4.88	□□□□□ -1.63
VPS30	YPL120W	YIL089W	P40500	205 aa		4.88	□□□□□ -1.63
VPS30	YPL120W	RIB2	Q12362	591 aa	Known RBP	4.88	□□□□□ -1.63
VPS30	YPL120W	HXT13	P39924	564 aa		4.87	□□□□□ -1.63
VPS30	YPL120W	MNN10	P50108	393 aa	Known RBP	4.87	□□□□□ -1.63
VPS30	YPL120W	HXT17	P53631	564 aa		4.87	□□□□□ -1.63
VPS30	YPL120W	HXT15	P54854	567 aa		4.87	□□□□□ -1.63
VPS30	YPL120W	SLM3	Q12093	417 aa		4.87	□□□□□ -1.63
VPS30	YPL120W	DBP5	P20449	482 aa	Known RBP	4.86	□□□□□ -1.63
VPS30	YPL120W	LST4	P34239	828 aa		4.86	□□□□□ -1.63
VPS30	YPL120W	MGE1	P38523	228 aa		4.86	□□□□□ -1.63
VPS30	YPL120W	PUS9	Q12069	462 aa		4.86	□□□□□ -1.63
VPS30	YPL120W	APC1	P53886	1748 aa		4.86	□□□□□ -1.63
VPS30	YPL120W	GCR1	P07261	785 aa		4.86	□□□□□ -1.63
VPS30	YPL120W	BAS1	P22035	811 aa		4.86	□□□□□ -1.63
VPS30	YPL120W	STE11	P23561	717 aa		4.86	□□□□□ -1.63
VPS30	YPL120W	CHZ1	P40019	153 aa	Predicted RBP	4.86	□□□□□ -1.63
VPS30	YPL120W	MSE1	P48525	536 aa		4.86	□□□□□ -1.63
VPS30	YPL120W	GNP1	P48813	663 aa		4.86	□□□□□ -1.63
VPS30	YPL120W	YLL066C	Q99208	1374 aa		4.86	□□□□□ -1.63
VPS30	YPL120W	NUM1	Q00402	2748 aa		4.85	□□□□□ -1.63
VPS30	YPL120W	SEN54	Q02825	467 aa	Predicted RBP	4.85	□□□□□ -1.63
VPS30	YPL120W	YAP6	Q03935	383 aa		4.85	□□□□□ -1.63
VPS30	YPL120W	YMR084W	A2P2R3	262 aa		4.84	□□□□□ -1.63
VPS30	YPL120W	CDC6	P09119	513 aa		4.84	□□□□□ -1.63
VPS30	YPL120W	MCM2	P29469	868 aa		4.84	□□□□□ -1.63
VPS30	YPL120W	GCV2	P49095	1034 aa		4.84	□□□□□ -1.63
VPS30	YPL120W	SIZ1	Q04195	904 aa		4.84	□□□□□ -1.63
VPS30	YPL120W	ADE6	P38972	1358 aa	Known RBP	4.83	□□□□□ -1.64
VPS30	YPL120W	RAD4	P14736	754 aa		4.83	□□□□□ -1.64
VPS30	YPL120W	MCM7	P38132	845 aa		4.83	□□□□□ -1.64
VPS30	YPL120W	MPH1	P40562	993 aa		4.83	□□□□□ -1.64
VPS30	YPL120W	ATG13	Q06628	738 aa		4.83	□□□□□ -1.64
VPS30	YPL120W	TOR1	P35169	2470 aa		4.83	□□□□□ -1.64
VPS30	YPL120W	NAP1	P25293	417 aa	Known RBP	4.83	□□□□□ -1.64
VPS30	YPL120W	EMC1	P25574	760 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms