RNA–Protein interactions for RNA: YOR216C

RUD3, Transcript of Golgi matrix protein, yeast

Gene RUD3, Length 1,455 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUD3	YOR216C	YLL058W	Q12198	575 aa		4.62	□□□□□ -1.67
RUD3	YOR216C	HSF1	P10961	833 aa		4.62	□□□□□ -1.67
RUD3	YOR216C	GIC1	P38785	314 aa		4.62	□□□□□ -1.67
RUD3	YOR216C	CCC2	P38995	1004 aa		4.62	□□□□□ -1.67
RUD3	YOR216C	EEB1	Q02891	456 aa		4.62	□□□□□ -1.67
RUD3	YOR216C	SRT1	Q03175	343 aa		4.62	□□□□□ -1.67
RUD3	YOR216C	ATG19	P35193	415 aa		4.61	□□□□□ -1.67
RUD3	YOR216C	STB4	P50104	949 aa		4.61	□□□□□ -1.67
RUD3	YOR216C	PSP2	P50109	593 aa	Known RBP	4.61	□□□□□ -1.67
RUD3	YOR216C	FUN30	P31380	1131 aa		4.6	□□□□□ -1.67
RUD3	YOR216C	SLD2	P34252	453 aa		4.6	□□□□□ -1.67
RUD3	YOR216C	YGL176C	P46945	554 aa		4.6	□□□□□ -1.67
RUD3	YOR216C	ACF2	Q12168	779 aa		4.6	□□□□□ -1.67
RUD3	YOR216C	RKM4	Q12504	494 aa		4.6	□□□□□ -1.67
RUD3	YOR216C	ERG4	P25340	473 aa		4.59	□□□□□ -1.67
RUD3	YOR216C	NDJ1	Q12366	352 aa		4.59	□□□□□ -1.67
RUD3	YOR216C	TRP4	P07285	380 aa	Predicted RBP	4.58	□□□□□ -1.68
RUD3	YOR216C	CAD1	P24813	409 aa	Known RBP	4.58	□□□□□ -1.68
RUD3	YOR216C	NPP2	P39997	493 aa		4.58	□□□□□ -1.68
RUD3	YOR216C	TYW3	P53177	273 aa		4.58	□□□□□ -1.68
RUD3	YOR216C	LGE1	Q02796	332 aa	Known RBP	4.58	□□□□□ -1.68
RUD3	YOR216C	YKL107W	P34251	309 aa		4.57	□□□□□ -1.68
RUD3	YOR216C	TIM44	Q01852	431 aa		4.57	□□□□□ -1.68
RUD3	YOR216C	YMR206W	Q03695	313 aa		4.57	□□□□□ -1.68
RUD3	YOR216C	RRP15	Q06511	250 aa	Predicted RBP	4.57	□□□□□ -1.68
RUD3	YOR216C	UPC2	Q12151	913 aa		4.56	□□□□□ -1.68
RUD3	YOR216C	SFB2	P53953	876 aa		4.56	□□□□□ -1.68
RUD3	YOR216C	YLR225C	Q05948	407 aa	Known RBP	4.56	□□□□□ -1.68
RUD3	YOR216C	MTH1	P35198	433 aa		4.55	□□□□□ -1.68
RUD3	YOR216C	RNT1	Q02555	471 aa		4.55	□□□□□ -1.68
RUD3	YOR216C	MUK1	Q02866	612 aa		4.55	□□□□□ -1.68
RUD3	YOR216C	TRM13	Q12383	476 aa		4.55	□□□□□ -1.68
RUD3	YOR216C	CDC34	P14682	295 aa		4.54	□□□□□ -1.68
RUD3	YOR216C	STE14	P32584	239 aa		4.54	□□□□□ -1.68
RUD3	YOR216C	SAH1	P39954	449 aa	Known RBP	4.54	□□□□□ -1.68
RUD3	YOR216C	PPR1	P07272	904 aa	Predicted RBP	4.53	□□□□□ -1.68
RUD3	YOR216C	SLU7	Q02775	382 aa	Known RBP	4.53	□□□□□ -1.68
RUD3	YOR216C	GND2	P53319	492 aa		4.52	□□□□□ -1.69
RUD3	YOR216C	ERG5	P54781	538 aa		4.52	□□□□□ -1.69
RUD3	YOR216C	RMD1	Q03441	430 aa		4.52	□□□□□ -1.69
RUD3	YOR216C	ESC2	Q06340	456 aa		4.52	□□□□□ -1.69
RUD3	YOR216C	RPC82	P32349	654 aa		4.51	□□□□□ -1.69
RUD3	YOR216C	MET10	P39692	1035 aa		4.51	□□□□□ -1.69
RUD3	YOR216C	ALG7	P07286	448 aa		4.5	□□□□□ -1.69
RUD3	YOR216C	CDC12	P32468	407 aa	Known RBP	4.5	□□□□□ -1.69
RUD3	YOR216C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.5	□□□□□ -1.69	not detected
RUD3	YOR216C	SED4	P25365	1065 aa		4.49	□□□□□ -1.69
RUD3	YOR216C	SPC42	P36094	363 aa		4.49	□□□□□ -1.69
RUD3	YOR216C	YER158C	P40095	573 aa		4.49	□□□□□ -1.69
RUD3	YOR216C	SPO20	Q04359	397 aa		4.49	□□□□□ -1.69
RUD3	YOR216C	PET112	P33893	541 aa		4.49	□□□□□ -1.69
RUD3	YOR216C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.49	□□□□□ -1.69	not detected
RUD3	YOR216C	SDS3	P40505	327 aa		4.48	□□□□□ -1.69
RUD3	YOR216C	GYP7	P48365	746 aa		4.47	□□□□□ -1.69
RUD3	YOR216C	RAI1	P53063	387 aa	Known RBP	4.47	□□□□□ -1.69
RUD3	YOR216C	SRP1	Q02821	542 aa	Known RBP	4.47	□□□□□ -1.69
RUD3	YOR216C	ABD1	P32783	436 aa	Predicted RBP	4.46	□□□□□ -1.7
RUD3	YOR216C	MBP1	P39678	833 aa		4.45	□□□□□ -1.7
RUD3	YOR216C	SNF7	P39929	240 aa	Known RBP	4.45	□□□□□ -1.7
RUD3	YOR216C	YPR196W	Q06595	470 aa		4.45	□□□□□ -1.7
RUD3	YOR216C	HBT1	Q07653	1046 aa	Known RBP	4.45	□□□□□ -1.7
RUD3	YOR216C	SEC21	P32074	935 aa	Known RBP	4.44	□□□□□ -1.7
RUD3	YOR216C	YGR053C	P53234	283 aa		4.44	□□□□□ -1.7
RUD3	YOR216C	OYE2	Q03558	400 aa	Known RBP	4.44	□□□□□ -1.7
RUD3	YOR216C	COQ11	Q05892	277 aa		4.44	□□□□□ -1.7
RUD3	YOR216C	PPS1	P38148	807 aa		4.43	□□□□□ -1.7
RUD3	YOR216C	TSL1	P38427	1098 aa	Known RBP	4.43	□□□□□ -1.7
RUD3	YOR216C	SSL1	Q04673	461 aa	Predicted RBP	4.43	□□□□□ -1.7
RUD3	YOR216C	DUS3	Q06053	668 aa	Known RBP	4.43	□□□□□ -1.7
RUD3	YOR216C	PEX19	Q07418	342 aa		4.43	□□□□□ -1.7
RUD3	YOR216C	NOT3	P06102	836 aa	Known RBP	4.43	□□□□□ -1.7
RUD3	YOR216C	MNR2	P35724	969 aa		4.43	□□□□□ -1.7
RUD3	YOR216C	FRE5	Q08908	694 aa		4.43	□□□□□ -1.7
RUD3	YOR216C	SUT2	Q12286	268 aa		4.43	□□□□□ -1.7
RUD3	YOR216C	PEX2	P32800	271 aa		4.42	□□□□□ -1.7
RUD3	YOR216C	YKR078W	P36158	585 aa	Known RBP	4.42	□□□□□ -1.7
RUD3	YOR216C	YHL017W	P38745	532 aa		4.42	□□□□□ -1.7
RUD3	YOR216C	FAA4	P47912	694 aa	Known RBP	4.42	□□□□□ -1.7
RUD3	YOR216C	MRH1	Q12117	320 aa	Predicted RBP	4.42	□□□□□ -1.7
RUD3	YOR216C	FBP1	P09201	348 aa		4.41	□□□□□ -1.7
RUD3	YOR216C	CTF13	P35203	478 aa		4.41	□□□□□ -1.7
RUD3	YOR216C	DAS1	P47005	663 aa		4.41	□□□□□ -1.7
RUD3	YOR216C	YKE2	P52553	114 aa		4.41	□□□□□ -1.7
RUD3	YOR216C	HOF1	Q05080	669 aa		4.41	□□□□□ -1.7
RUD3	YOR216C	NPP1	P25353	742 aa		4.4	□□□□□ -1.71
RUD3	YOR216C	CDC48	P25694	835 aa	Known RBP	4.4	□□□□□ -1.71
RUD3	YOR216C	HEM3	P28789	327 aa		4.4	□□□□□ -1.71
RUD3	YOR216C	STE13	P33894	931 aa		4.4	□□□□□ -1.71
RUD3	YOR216C	YBR238C	P38330	731 aa	Known RBP	4.4	□□□□□ -1.71
RUD3	YOR216C	SDP1	P40479	209 aa		4.4	□□□□□ -1.71
RUD3	YOR216C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.4	□□□□□ -1.71	not detected
RUD3	YOR216C	IMO32	P53219	342 aa		4.4	□□□□□ -1.71
RUD3	YOR216C	ILV6	P25605	309 aa	Known RBP	4.39	□□□□□ -1.71
RUD3	YOR216C	AFT2	Q08957	416 aa		4.39	□□□□□ -1.71
RUD3	YOR216C	BNR1	P40450	1375 aa		4.38	□□□□□ -1.71
RUD3	YOR216C	TUB3	P09734	445 aa	Known RBP	4.38	□□□□□ -1.71
RUD3	YOR216C	SBA1	P28707	216 aa	Known RBP	4.38	□□□□□ -1.71
RUD3	YOR216C	RPD3	P32561	433 aa		4.38	□□□□□ -1.71
RUD3	YOR216C	ELO3	P40319	345 aa		4.38	□□□□□ -1.71
RUD3	YOR216C	ADY4	Q05955	493 aa		4.38	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 177.3 ms