RNA–Protein interactions for RNA: YOR078W

BUD21, Transcript of Component of small ribosomal subunit (SSU) processosome, yeastyeast

Gene BUD21, Length 645 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD21YOR078W RRP15Q06511 250 aaPredicted RBP5.12□□□□□ -1.59
BUD21YOR078W RKM4Q12504 494 aa5.12□□□□□ -1.59
BUD21YOR078W FUN30P31380 1131 aa5.11□□□□□ -1.59
BUD21YOR078W SLD2P34252 453 aa5.11□□□□□ -1.59
BUD21YOR078W STB4P50104 949 aa5.11□□□□□ -1.59
BUD21YOR078W TYW3P53177 273 aa5.1□□□□□ -1.59
BUD21YOR078W MCH5Q08777 521 aa5.1□□□□□ -1.59
BUD21YOR078W GUP2Q08929 609 aa5.1□□□□□ -1.59
BUD21YOR078W CAD1P24813 409 aaKnown RBP5.09□□□□□ -1.59
BUD21YOR078W ERG4P25340 473 aa5.09□□□□□ -1.59
BUD21YOR078W YKL107WP34251 309 aa5.09□□□□□ -1.59
BUD21YOR078W KTR4P38131 464 aa5.09□□□□□ -1.59
BUD21YOR078W STU2P46675 888 aa5.08□□□□□ -1.6
BUD21YOR078W SFB2P53953 876 aa5.08□□□□□ -1.6
BUD21YOR078W LGE1Q02796 332 aaKnown RBP5.08□□□□□ -1.6
BUD21YOR078W YMR206WQ03695 313 aa5.08□□□□□ -1.6
BUD21YOR078W OMS1Q06668 471 aa5.08□□□□□ -1.6
BUD21YOR078W UPC2Q12151 913 aa5.08□□□□□ -1.6
BUD21YOR078W CDC34P14682 295 aa5.07□□□□□ -1.6
BUD21YOR078W ATG19P35193 415 aa5.07□□□□□ -1.6
BUD21YOR078W YLR225CQ05948 407 aaKnown RBP5.07□□□□□ -1.6
BUD21YOR078W BDF2Q07442 638 aa5.07□□□□□ -1.6
BUD21YOR078W IRC10Q08118 586 aa5.07□□□□□ -1.6
BUD21YOR078W TRM13Q12383 476 aa5.07□□□□□ -1.6
BUD21YOR078W SAH1P39954 449 aaKnown RBP5.06□□□□□ -1.6
BUD21YOR078W MUK1Q02866 612 aa5.06□□□□□ -1.6
BUD21YOR078W TRP4P07285 380 aaPredicted RBP5.05□□□□□ -1.6
BUD21YOR078W STE14P32584 239 aa5.05□□□□□ -1.6
BUD21YOR078W SLU7Q02775 382 aaKnown RBP5.05□□□□□ -1.6
BUD21YOR078W ESC2Q06340 456 aa5.05□□□□□ -1.6
BUD21YOR078W ACF2Q12168 779 aa5.05□□□□□ -1.6
BUD21YOR078W MET10P39692 1035 aa5.04□□□□□ -1.6
BUD21YOR078W RMD1Q03441 430 aa5.04□□□□□ -1.6
BUD21YOR078W MTH1P35198 433 aa5.03□□□□□ -1.6
BUD21YOR078W CUE2P36075 443 aaKnown RBP5.03□□□□□ -1.6
BUD21YOR078W ERG5P54781 538 aa5.02□□□□□ -1.61
BUD21YOR078W RNT1Q02555 471 aa5.02□□□□□ -1.61
BUD21YOR078W CDC12P32468 407 aaKnown RBP5.01□□□□□ -1.61
BUD21YOR078W PET112P33893 541 aa5.01□□□□□ -1.61
BUD21YOR078W GND2P53319 492 aa5.01□□□□□ -1.61
BUD21YOR078W SPO20Q04359 397 aa5.01□□□□□ -1.61
BUD21YOR078W PPR1P07272 904 aaPredicted RBP5□□□□□ -1.61
BUD21YOR078W ALG7P07286 448 aa5□□□□□ -1.61
BUD21YOR078W SED4P25365 1065 aa5□□□□□ -1.61
BUD21YOR078W SNM1P40993 198 aa5□□□□□ -1.61
BUD21YOR078W TIM44Q01852 431 aa5□□□□□ -1.61
BUD21YOR078W RPC82P32349 654 aa4.99□□□□□ -1.61
BUD21YOR078W SPC42P36094 363 aa4.99□□□□□ -1.61
BUD21YOR078W ABD1P32783 436 aaPredicted RBP4.98□□□□□ -1.61
BUD21YOR078W PIN4P34217 668 aaKnown RBP RIP-Chip data4.98□□□□□ -1.61not detected
BUD21YOR078W MBP1P39678 833 aa4.97□□□□□ -1.61
BUD21YOR078W GYP7P48365 746 aa4.97□□□□□ -1.61
BUD21YOR078W RAI1P53063 387 aaKnown RBP4.97□□□□□ -1.61
BUD21YOR078W SRP1Q02821 542 aaKnown RBP4.97□□□□□ -1.61
BUD21YOR078W YER158CP40095 573 aa4.96□□□□□ -1.62
BUD21YOR078W OYE2Q03558 400 aaKnown RBP4.96□□□□□ -1.62
BUD21YOR078W YPR196WQ06595 470 aa4.96□□□□□ -1.62
BUD21YOR078W SEC21P32074 935 aaKnown RBP4.95□□□□□ -1.62
BUD21YOR078W TSL1P38427 1098 aaKnown RBP4.95□□□□□ -1.62
BUD21YOR078W YGR053CP53234 283 aa4.95□□□□□ -1.62
BUD21YOR078W SSL1Q04673 461 aaPredicted RBP4.95□□□□□ -1.62
BUD21YOR078W SNF7P39929 240 aaKnown RBP4.94□□□□□ -1.62
BUD21YOR078W SDS3P40505 327 aa4.94□□□□□ -1.62
BUD21YOR078W DUS3Q06053 668 aaKnown RBP4.94□□□□□ -1.62
BUD21YOR078W NOT3P06102 836 aaKnown RBP4.93□□□□□ -1.62
BUD21YOR078W MNR2P35724 969 aa4.93□□□□□ -1.62
BUD21YOR078W FAA4P47912 694 aaKnown RBP4.93□□□□□ -1.62
BUD21YOR078W PEX19Q07418 342 aa4.93□□□□□ -1.62
BUD21YOR078W MSL5Q12186 476 aaKnown RBP RIP-Chip data4.93□□□□□ -1.62not detected
BUD21YOR078W PPS1P38148 807 aa4.92□□□□□ -1.62
BUD21YOR078W YKE2P52553 114 aa4.92□□□□□ -1.62
BUD21YOR078W FRE5Q08908 694 aa4.92□□□□□ -1.62
BUD21YOR078W NDJ1Q12366 352 aa4.92□□□□□ -1.62
BUD21YOR078W FBP1P09201 348 aa4.91□□□□□ -1.62
BUD21YOR078W NPP1P25353 742 aa4.91□□□□□ -1.62
BUD21YOR078W PEX2P32800 271 aa4.91□□□□□ -1.62
BUD21YOR078W YKR078WP36158 585 aaKnown RBP4.91□□□□□ -1.62
BUD21YOR078W SUT2Q12286 268 aa4.91□□□□□ -1.62
BUD21YOR078W HEM3P28789 327 aa4.9□□□□□ -1.63
BUD21YOR078W STE13P33894 931 aa4.9□□□□□ -1.63
BUD21YOR078W CTF13P35203 478 aa4.9□□□□□ -1.63
BUD21YOR078W YBR238CP38330 731 aaKnown RBP4.9□□□□□ -1.63
BUD21YOR078W GUS1P46655 708 aaKnown RBP RIP-Chip data4.9□□□□□ -1.63not detected
BUD21YOR078W HBT1Q07653 1046 aaKnown RBP4.9□□□□□ -1.63
BUD21YOR078W MRH1Q12117 320 aaPredicted RBP4.9□□□□□ -1.63
BUD21YOR078W TUB3P09734 445 aaKnown RBP4.89□□□□□ -1.63
BUD21YOR078W CDC48P25694 835 aaKnown RBP4.89□□□□□ -1.63
BUD21YOR078W RPD3P32561 433 aa4.89□□□□□ -1.63
BUD21YOR078W AFR1P33304 620 aa4.89□□□□□ -1.63
BUD21YOR078W SDP1P40479 209 aa4.89□□□□□ -1.63
BUD21YOR078W SBA1P28707 216 aaKnown RBP4.88□□□□□ -1.63
BUD21YOR078W AGP1P25376 633 aa4.87□□□□□ -1.63
BUD21YOR078W YHL017WP38745 532 aa4.87□□□□□ -1.63
BUD21YOR078W ELO3P40319 345 aa4.87□□□□□ -1.63
BUD21YOR078W GDE1Q02979 1223 aa4.87□□□□□ -1.63
BUD21YOR078W BNR1P40450 1375 aa4.87□□□□□ -1.63
BUD21YOR078W MET3P08536 511 aa4.86□□□□□ -1.63
BUD21YOR078W DLT1Q04216 342 aa4.86□□□□□ -1.63
BUD21YOR078W ADY4Q05955 493 aa4.86□□□□□ -1.63
BUD21YOR078W TRM11Q12463 433 aa4.86□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 44.7 ms