RNA–Protein interactions for RNA: YNL287W

SEC21, Transcript of Gamma subunit of coatomer, yeastyeast

Gene SEC21, Length 2,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC21YNL287W YPL066WQ12194 479 aa1.69□□□□□ -2.14
SEC21YNL287W PMC1P38929 1173 aaPredicted RBP1.68□□□□□ -2.14
SEC21YNL287W RPS26AP39938 119 aaKnown RBP1.68□□□□□ -2.14
SEC21YNL287W RPS26BP39939 119 aaKnown RBP1.68□□□□□ -2.14
SEC21YNL287W RPT2P40327 437 aaKnown RBP1.68□□□□□ -2.14
SEC21YNL287W NCS6P53088 359 aa1.68□□□□□ -2.14
SEC21YNL287W GTF1P53260 183 aaPredicted RBP1.68□□□□□ -2.14
SEC21YNL287W GIR2Q03768 265 aaPredicted RBP1.68□□□□□ -2.14
SEC21YNL287W GRX3Q03835 250 aa1.68□□□□□ -2.14
SEC21YNL287W RPA135P22138 1203 aaKnown RBP1.68□□□□□ -2.14
SEC21YNL287W FYV10P40492 516 aa1.68□□□□□ -2.14
SEC21YNL287W RTT10Q08924 1013 aa1.68□□□□□ -2.14
SEC21YNL287W THS1P04801 734 aaKnown RBP1.67□□□□□ -2.14
SEC21YNL287W ATE1P16639 503 aa1.67□□□□□ -2.14
SEC21YNL287W TOM20P35180 183 aa1.67□□□□□ -2.14
SEC21YNL287W MPE1P35728 441 aaKnown RBP1.67□□□□□ -2.14
SEC21YNL287W FPR3P38911 411 aaKnown RBP1.67□□□□□ -2.14
SEC21YNL287W HOS4P40480 1083 aa1.67□□□□□ -2.14
SEC21YNL287W NPL3Q01560 414 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
SEC21YNL287W EEB1Q02891 456 aa1.67□□□□□ -2.14
SEC21YNL287W PSK2Q08217 1101 aa1.67□□□□□ -2.14
SEC21YNL287W HRR25P29295 494 aaKnown RBP1.67□□□□□ -2.14
SEC21YNL287W POA1P38218 177 aa1.67□□□□□ -2.14
SEC21YNL287W QRI1P43123 477 aaKnown RBP1.67□□□□□ -2.14
SEC21YNL287W YML122CQ03207 126 aa1.67□□□□□ -2.14
SEC21YNL287W GUP2Q08929 609 aa1.67□□□□□ -2.14
SEC21YNL287W TRP2P00899 507 aaKnown RBP1.67□□□□□ -2.14
SEC21YNL287W RPP2AP05319 106 aaKnown RBP1.67□□□□□ -2.14
SEC21YNL287W SPE1P08432 466 aa1.67□□□□□ -2.14
SEC21YNL287W RNA1P11745 407 aaKnown RBP1.67□□□□□ -2.14
SEC21YNL287W MCM2P29469 868 aa1.67□□□□□ -2.14
SEC21YNL287W NMD2P38798 1089 aaKnown RBP1.67□□□□□ -2.14
SEC21YNL287W NPP2P39997 493 aa1.67□□□□□ -2.14
SEC21YNL287W ZRG8P40021 1076 aa1.67□□□□□ -2.14
SEC21YNL287W THI12P42883 340 aa1.67□□□□□ -2.14
SEC21YNL287W THI5P43534 340 aa1.67□□□□□ -2.14
SEC21YNL287W THI11P47183 340 aa1.67□□□□□ -2.14
SEC21YNL287W SPR28Q04921 423 aa1.67□□□□□ -2.14
SEC21YNL287W HRQ1Q05549 1077 aa1.67□□□□□ -2.14
SEC21YNL287W FPR4Q06205 392 aaPredicted RBP1.67□□□□□ -2.14
SEC21YNL287W YDL121CQ07541 149 aa1.67□□□□□ -2.14
SEC21YNL287W THI13Q07748 340 aa1.67□□□□□ -2.14
SEC21YNL287W REV3P14284 1504 aa1.66□□□□□ -2.14
SEC21YNL287W HSP82P02829 709 aaKnown RBP1.66□□□□□ -2.14
SEC21YNL287W PFK1P16861 987 aaKnown RBP1.66□□□□□ -2.14
SEC21YNL287W FUN30P31380 1131 aa1.66□□□□□ -2.14
SEC21YNL287W LYP1P32487 611 aa1.66□□□□□ -2.14
SEC21YNL287W STE14P32584 239 aa1.66□□□□□ -2.14
SEC21YNL287W NFU1P32860 256 aa1.66□□□□□ -2.14
SEC21YNL287W ECM21P38167 1117 aaKnown RBP1.66□□□□□ -2.14
SEC21YNL287W GIC1P38785 314 aa1.66□□□□□ -2.14
SEC21YNL287W YGR012WP53206 393 aa1.66□□□□□ -2.14
SEC21YNL287W ERG5P54781 538 aa1.66□□□□□ -2.14
SEC21YNL287W SLU7Q02775 382 aaKnown RBP1.66□□□□□ -2.14
SEC21YNL287W SRT1Q03175 343 aa1.66□□□□□ -2.14
SEC21YNL287W RMD1Q03441 430 aa1.66□□□□□ -2.14
SEC21YNL287W ESF1Q06344 628 aaKnown RBP1.66□□□□□ -2.14
SEC21YNL287W YLR040CQ07988 224 aa1.66□□□□□ -2.14
SEC21YNL287W MDM38Q08179 573 aa1.66□□□□□ -2.14
SEC21YNL287W TMA46Q12000 345 aaKnown RBP1.66□□□□□ -2.14
SEC21YNL287W TPM2P40414 161 aa1.66□□□□□ -2.14
SEC21YNL287W FAF1P40546 346 aaPredicted RBP1.66□□□□□ -2.14
SEC21YNL287W MEH1Q02205 184 aa1.66□□□□□ -2.14
SEC21YNL287W PKH1Q03407 766 aa1.66□□□□□ -2.14
SEC21YNL287W NPC2Q12408 173 aa1.66□□□□□ -2.14
SEC21YNL287W RKM4Q12504 494 aa1.66□□□□□ -2.14
SEC21YNL287W CDC34P14682 295 aa1.65□□□□□ -2.14
SEC21YNL287W KAR4P25583 335 aa1.65□□□□□ -2.14
SEC21YNL287W EFT1P32324 842 aaKnown RBP1.65□□□□□ -2.14
SEC21YNL287W CEF1Q03654 590 aaPredicted RBP1.65□□□□□ -2.14
SEC21YNL287W NAB6Q03735 1134 aaKnown RBP RIP-Chip data1.65□□□□□ -2.14not detected
SEC21YNL287W HEM3P28789 327 aa1.65□□□□□ -2.15
SEC21YNL287W SLD2P34252 453 aa1.65□□□□□ -2.15
SEC21YNL287W ATG19P35193 415 aa1.65□□□□□ -2.15
SEC21YNL287W MCM7P38132 845 aa1.65□□□□□ -2.15
SEC21YNL287W ERP2P39704 215 aa1.65□□□□□ -2.15
SEC21YNL287W SVL3Q03088 825 aaKnown RBP1.65□□□□□ -2.15
SEC21YNL287W PLP2Q12017 286 aa1.65□□□□□ -2.15
SEC21YNL287W TRP4P07285 380 aaPredicted RBP1.64□□□□□ -2.15
SEC21YNL287W FBP1P09201 348 aa1.64□□□□□ -2.15
SEC21YNL287W PWP2P25635 923 aaKnown RBP1.64□□□□□ -2.15
SEC21YNL287W YBR238CP38330 731 aaKnown RBP1.64□□□□□ -2.15
SEC21YNL287W DNM1P54861 757 aa1.64□□□□□ -2.15
SEC21YNL287W GDE1Q02979 1223 aa1.64□□□□□ -2.15
SEC21YNL287W TMN2Q04562 672 aa1.64□□□□□ -2.15
SEC21YNL287W TMA64Q04600 565 aaKnown RBP1.64□□□□□ -2.15
SEC21YNL287W SPP382Q06411 708 aaPredicted RBP1.64□□□□□ -2.15
SEC21YNL287W OMS1Q06668 471 aa1.64□□□□□ -2.15
SEC21YNL287W AIM39Q08223 395 aa1.64□□□□□ -2.15
SEC21YNL287W YOL057WQ08225 711 aa1.64□□□□□ -2.15
SEC21YNL287W YOL073CQ08232 322 aa1.64□□□□□ -2.15
SEC21YNL287W UPC2Q12151 913 aa1.64□□□□□ -2.15
SEC21YNL287W SSF2Q12153 453 aaPredicted RBP1.64□□□□□ -2.15
SEC21YNL287W MDS3P53094 1487 aa1.64□□□□□ -2.15
SEC21YNL287W TY1B-AO13527 1196 aaKnown RBP1.64□□□□□ -2.15
SEC21YNL287W HSF1P10961 833 aa1.64□□□□□ -2.15
SEC21YNL287W RPC82P32349 654 aa1.64□□□□□ -2.15
SEC21YNL287W CDC12P32468 407 aaKnown RBP1.64□□□□□ -2.15
SEC21YNL287W KTR4P38131 464 aa1.64□□□□□ -2.15
SEC21YNL287W MGE1P38523 228 aa1.64□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 306.2 ms