RNA–Protein interactions for RNA: YNL049C

SFB2, Transcript of Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB2, Length 2,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB2YNL049C HTS1P07263 546 aaKnown RBP2.19□□□□□ -2.06
SFB2YNL049C AGP1P25376 633 aa2.19□□□□□ -2.06
SFB2YNL049C PER1P25625 357 aa2.19□□□□□ -2.06
SFB2YNL049C ICL1P28240 557 aaPredicted RBP2.19□□□□□ -2.06
SFB2YNL049C LYP1P32487 611 aa2.19□□□□□ -2.06
SFB2YNL049C POA1P38218 177 aa2.19□□□□□ -2.06
SFB2YNL049C RSP5P39940 809 aaKnown RBP2.19□□□□□ -2.06
SFB2YNL049C MSH4P40965 878 aaPredicted RBP2.19□□□□□ -2.06
SFB2YNL049C SCW11P53189 542 aa2.19□□□□□ -2.06
SFB2YNL049C CUZ1P53899 274 aa2.19□□□□□ -2.06
SFB2YNL049C YMR265CQ03508 461 aaKnown RBP2.19□□□□□ -2.06
SFB2YNL049C TY1A-DR2Q03964 440 aaKnown RBP2.19□□□□□ -2.06
SFB2YNL049C FLC1Q08967 793 aa2.19□□□□□ -2.06
SFB2YNL049C RPP1AP05318 106 aaPredicted RBP2.18□□□□□ -2.06
SFB2YNL049C DED1P06634 604 aaKnown RBP2.18□□□□□ -2.06
SFB2YNL049C VBA5P36172 582 aa2.18□□□□□ -2.06
SFB2YNL049C NEM1P38757 446 aa2.18□□□□□ -2.06
SFB2YNL049C MAM1P40065 302 aa2.18□□□□□ -2.06
SFB2YNL049C SLS1P42900 643 aa2.18□□□□□ -2.06
SFB2YNL049C ROG3P43602 733 aa2.18□□□□□ -2.06
SFB2YNL049C TY1A-MR1Q04215 440 aa2.18□□□□□ -2.06
SFB2YNL049C SOG2Q08817 791 aa2.18□□□□□ -2.06
SFB2YNL049C ERR1P0CX10 437 aa2.18□□□□□ -2.06
SFB2YNL049C ERR2P0CX11 437 aa2.18□□□□□ -2.06
SFB2YNL049C TAF13P11747 167 aa2.18□□□□□ -2.06
SFB2YNL049C DAL5P15365 543 aa2.18□□□□□ -2.06
SFB2YNL049C VMA4P22203 233 aaKnown RBP2.18□□□□□ -2.06
SFB2YNL049C FPS1P23900 669 aa2.18□□□□□ -2.06
SFB2YNL049C RPL8BP29453 256 aaKnown RBP2.18□□□□□ -2.06
SFB2YNL049C MKK2P32491 506 aa2.18□□□□□ -2.06
SFB2YNL049C FPR3P38911 411 aaKnown RBP2.18□□□□□ -2.06
SFB2YNL049C SHU2P38957 223 aa2.18□□□□□ -2.06
SFB2YNL049C PFD1P46988 109 aa2.18□□□□□ -2.06
SFB2YNL049C KIP3P53086 805 aaKnown RBP2.18□□□□□ -2.06
SFB2YNL049C YGR125WP53273 1036 aa2.18□□□□□ -2.06
SFB2YNL049C HAS1Q03532 505 aaKnown RBP2.18□□□□□ -2.06
SFB2YNL049C FMP25Q08023 583 aa2.18□□□□□ -2.06
SFB2YNL049C UBR2Q07963 1872 aa2.17□□□□□ -2.06
SFB2YNL049C MET6P05694 767 aaKnown RBP2.17□□□□□ -2.06
SFB2YNL049C PHO8P11491 566 aa2.17□□□□□ -2.06
SFB2YNL049C PUF4P25339 888 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
SFB2YNL049C SBA1P28707 216 aaKnown RBP2.17□□□□□ -2.06
SFB2YNL049C YKL077WP36081 392 aa2.17□□□□□ -2.06
SFB2YNL049C MNN1P39106 762 aa2.17□□□□□ -2.06
SFB2YNL049C NEO1P40527 1151 aa2.17□□□□□ -2.06
SFB2YNL049C YNL050CP53952 270 aa2.17□□□□□ -2.06
SFB2YNL049C ADE12P80210 433 aaKnown RBP2.17□□□□□ -2.06
SFB2YNL049C TIF35Q04067 274 aaKnown RBP2.17□□□□□ -2.06
SFB2YNL049C SHE9Q04172 456 aa2.17□□□□□ -2.06
SFB2YNL049C UTP5Q04177 643 aaKnown RBP2.17□□□□□ -2.06
SFB2YNL049C SPO20Q04359 397 aa2.17□□□□□ -2.06
SFB2YNL049C YPL066WQ12194 479 aa2.17□□□□□ -2.06
SFB2YNL049C MDM20Q12387 796 aaKnown RBP2.17□□□□□ -2.06
SFB2YNL049C DPH6Q12429 685 aa2.17□□□□□ -2.06
SFB2YNL049C LAM4P38800 1345 aa2.17□□□□□ -2.06
SFB2YNL049C SCP160P06105 1222 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06 RIP-Chip
SFB2YNL049C INO1P11986 533 aa2.17□□□□□ -2.06
SFB2YNL049C VAB2P40003 282 aa2.17□□□□□ -2.06
SFB2YNL049C EST2Q06163 884 aa2.17□□□□□ -2.06
SFB2YNL049C YMR084WA2P2R3 262 aa2.16□□□□□ -2.06
SFB2YNL049C CIT1P00890 479 aa2.16□□□□□ -2.06
SFB2YNL049C CAN1P04817 590 aa2.16□□□□□ -2.06
SFB2YNL049C KRE2P27809 442 aa2.16□□□□□ -2.06
SFB2YNL049C MRP8P35719 219 aa2.16□□□□□ -2.06
SFB2YNL049C IRR1P40541 1150 aa2.16□□□□□ -2.06
SFB2YNL049C BFA1P47113 574 aa2.16□□□□□ -2.06
SFB2YNL049C ENT3P47160 408 aa2.16□□□□□ -2.06
SFB2YNL049C YJR142WP47173 342 aa2.16□□□□□ -2.06
SFB2YNL049C VPS62P53285 467 aa2.16□□□□□ -2.06
SFB2YNL049C SOK2P53438 785 aaPredicted RBP2.16□□□□□ -2.06
SFB2YNL049C POB3Q04636 552 aaKnown RBP2.16□□□□□ -2.06
SFB2YNL049C SYT1Q06836 1226 aa2.16□□□□□ -2.06
SFB2YNL049C SPO75Q07798 868 aa2.16□□□□□ -2.06
SFB2YNL049C YIG1Q08956 461 aa2.16□□□□□ -2.06
SFB2YNL049C OSH2Q12451 1283 aa2.16□□□□□ -2.06
SFB2YNL049C YDR461C-AQ2V2P7 80 aa2.16□□□□□ -2.06
SFB2YNL049C MOT1P32333 1867 aa2.16□□□□□ -2.06
SFB2YNL049C RIF1P29539 1916 aa2.16□□□□□ -2.06
SFB2YNL049C SBP1P10080 294 aaKnown RBP2.16□□□□□ -2.06
SFB2YNL049C HSP60P19882 572 aaKnown RBP2.16□□□□□ -2.06
SFB2YNL049C SYP1P25623 870 aaKnown RBP2.16□□□□□ -2.06
SFB2YNL049C CDC60P26637 1090 aaKnown RBP2.16□□□□□ -2.06
SFB2YNL049C SYN8P31377 255 aa2.16□□□□□ -2.06
SFB2YNL049C ADD66P36040 267 aa2.16□□□□□ -2.06
SFB2YNL049C MBP1P39678 833 aa2.16□□□□□ -2.06
SFB2YNL049C NIT1P40447 199 aa2.16□□□□□ -2.06
SFB2YNL049C LYS5P50113 272 aa2.16□□□□□ -2.06
SFB2YNL049C RTA1P53047 317 aa2.16□□□□□ -2.06
SFB2YNL049C GUP1P53154 560 aa2.16□□□□□ -2.06
SFB2YNL049C UBX5Q06682 500 aa2.16□□□□□ -2.06
SFB2YNL049C DAP1Q12091 152 aa2.16□□□□□ -2.06
SFB2YNL049C YLR125WQ12138 136 aa2.16□□□□□ -2.06
SFB2YNL049C GAL11P19659 1081 aa2.15□□□□□ -2.06
SFB2YNL049C DBP5P20449 482 aaKnown RBP2.15□□□□□ -2.06
SFB2YNL049C TSR4P25040 408 aa2.15□□□□□ -2.06
SFB2YNL049C ARE1P25628 610 aa2.15□□□□□ -2.06
SFB2YNL049C THI4P32318 326 aa2.15□□□□□ -2.06
SFB2YNL049C AKL1P38080 1108 aaKnown RBP2.15□□□□□ -2.06
SFB2YNL049C PBY1P38254 753 aa2.15□□□□□ -2.06
SFB2YNL049C PSF2P40359 213 aa2.15□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 74.7 ms