RNA–Protein interactions for RNA: YML001W

YPT7, Transcript of Rab family GTPase, yeast

Gene YPT7, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT7	YML001W	PDR5	P33302	1511 aa	Known RBP	4.72	□□□□□ -1.65
YPT7	YML001W	IML1	P47170	1584 aa		4.71	□□□□□ -1.66
YPT7	YML001W	CYC1	P00044	109 aa	Predicted RBP	4.71	□□□□□ -1.66
YPT7	YML001W	SRM1	P21827	482 aa		4.71	□□□□□ -1.66
YPT7	YML001W	BAS1	P22035	811 aa		4.71	□□□□□ -1.66
YPT7	YML001W	TOD6	P34219	525 aa		4.71	□□□□□ -1.66
YPT7	YML001W	MCM7	P38132	845 aa		4.71	□□□□□ -1.66
YPT7	YML001W	LAM1	P38851	1228 aa		4.71	□□□□□ -1.66
YPT7	YML001W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.71	□□□□□ -1.66	not detected
YPT7	YML001W	SIZ1	Q04195	904 aa		4.71	□□□□□ -1.66
YPT7	YML001W	YPL066W	Q12194	479 aa		4.71	□□□□□ -1.66
YPT7	YML001W	VMR1	P38735	1592 aa		4.7	□□□□□ -1.66
YPT7	YML001W	RPL11A	P0C0W9	174 aa	Known RBP	4.7	□□□□□ -1.66
YPT7	YML001W	DBP2	P24783	546 aa	Known RBP	4.7	□□□□□ -1.66
YPT7	YML001W	SLA2	P33338	968 aa		4.7	□□□□□ -1.66
YPT7	YML001W	YKL222C	P35995	705 aa		4.7	□□□□□ -1.66
YPT7	YML001W	RFC5	P38251	354 aa		4.7	□□□□□ -1.66
YPT7	YML001W	PNT1	P38969	423 aa		4.7	□□□□□ -1.66
YPT7	YML001W	MEF2	P39677	819 aa		4.7	□□□□□ -1.66
YPT7	YML001W	GIP4	P39732	760 aa		4.7	□□□□□ -1.66
YPT7	YML001W	MXR1	P40029	184 aa		4.7	□□□□□ -1.66
YPT7	YML001W	GCN5	Q03330	439 aa		4.7	□□□□□ -1.66
YPT7	YML001W	ACM1	Q08981	209 aa		4.7	□□□□□ -1.66
YPT7	YML001W	SVS1	Q12254	260 aa		4.7	□□□□□ -1.66
YPT7	YML001W	RPL11B	Q3E757	174 aa	Predicted RBP	4.7	□□□□□ -1.66
YPT7	YML001W	PDR11	P40550	1411 aa		4.7	□□□□□ -1.66
YPT7	YML001W	RAV1	P47104	1357 aa		4.69	□□□□□ -1.66
YPT7	YML001W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
YPT7	YML001W	PRS1	P32895	427 aa	Known RBP	4.69	□□□□□ -1.66
YPT7	YML001W	ESL2	P36168	1195 aa		4.69	□□□□□ -1.66
YPT7	YML001W	UGA2	P38067	497 aa		4.69	□□□□□ -1.66
YPT7	YML001W	TYW3	P53177	273 aa		4.69	□□□□□ -1.66
YPT7	YML001W	PLB2	Q03674	706 aa		4.69	□□□□□ -1.66
YPT7	YML001W	RSM24	Q03976	319 aa		4.69	□□□□□ -1.66
YPT7	YML001W	DUS4	Q06063	367 aa		4.69	□□□□□ -1.66
YPT7	YML001W	RTC1	Q08281	1341 aa		4.69	□□□□□ -1.66
YPT7	YML001W	SEC7	P11075	2009 aa	Known RBP	4.68	□□□□□ -1.66
YPT7	YML001W	NUP188	P52593	1655 aa	Known RBP	4.68	□□□□□ -1.66
YPT7	YML001W	INO1	P11986	533 aa		4.68	□□□□□ -1.66
YPT7	YML001W	ACE2	P21192	770 aa		4.68	□□□□□ -1.66
YPT7	YML001W	CLU1	Q03690	1277 aa	Known RBP	4.68	□□□□□ -1.66
YPT7	YML001W	RKM4	Q12504	494 aa		4.68	□□□□□ -1.66
YPT7	YML001W	YLR419W	Q06698	1435 aa	Known RBP	4.67	□□□□□ -1.66
YPT7	YML001W	TRM3	Q07527	1436 aa		4.67	□□□□□ -1.66
YPT7	YML001W	BI4	P03879	638 aa		4.67	□□□□□ -1.66
YPT7	YML001W	GAL10	P04397	699 aa		4.67	□□□□□ -1.66
YPT7	YML001W	CMP2	P14747	604 aa		4.67	□□□□□ -1.66
YPT7	YML001W	MOT2	P34909	587 aa	Known RBP	4.67	□□□□□ -1.66
YPT7	YML001W	GEM1	P39722	662 aa		4.67	□□□□□ -1.66
YPT7	YML001W	SIP5	P40210	489 aa	Known RBP	4.67	□□□□□ -1.66
YPT7	YML001W	YGR053C	P53234	283 aa		4.67	□□□□□ -1.66
YPT7	YML001W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
YPT7	YML001W	CDC6	P09119	513 aa		4.66	□□□□□ -1.66
YPT7	YML001W	KIN2	P13186	1147 aa	Known RBP	4.66	□□□□□ -1.66
YPT7	YML001W	SPE2	P21182	396 aa		4.66	□□□□□ -1.66
YPT7	YML001W	DOM34	P33309	386 aa		4.66	□□□□□ -1.66
YPT7	YML001W	TYS1	P36421	394 aa	Known RBP	4.66	□□□□□ -1.66
YPT7	YML001W	RRT14	P40470	206 aa		4.66	□□□□□ -1.66
YPT7	YML001W	FAA4	P47912	694 aa	Known RBP	4.66	□□□□□ -1.66
YPT7	YML001W	SPT20	P50875	604 aa		4.66	□□□□□ -1.66
YPT7	YML001W	ROT1	Q03691	256 aa		4.66	□□□□□ -1.66
YPT7	YML001W	TAF8	Q03750	510 aa		4.66	□□□□□ -1.66
YPT7	YML001W	SPP382	Q06411	708 aa	Predicted RBP	4.66	□□□□□ -1.66
YPT7	YML001W	YOR352W	Q08816	343 aa		4.66	□□□□□ -1.66
YPT7	YML001W	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.65	□□□□□ -1.66
YPT7	YML001W	YLR358C	O13565	187 aa		4.65	□□□□□ -1.67
YPT7	YML001W	APL1	P27351	700 aa		4.65	□□□□□ -1.67
YPT7	YML001W	YKL107W	P34251	309 aa		4.65	□□□□□ -1.67
YPT7	YML001W	MSC2	Q03455	724 aa		4.65	□□□□□ -1.67
YPT7	YML001W	NUP192	P47054	1683 aa		4.64	□□□□□ -1.67
YPT7	YML001W	NAP1	P25293	417 aa	Known RBP	4.64	□□□□□ -1.67
YPT7	YML001W	CTS1	P29029	562 aa		4.64	□□□□□ -1.67
YPT7	YML001W	YGL176C	P46945	554 aa		4.64	□□□□□ -1.67
YPT7	YML001W	HFM1	P51979	1187 aa		4.64	□□□□□ -1.67
YPT7	YML001W	SPO20	Q04359	397 aa		4.64	□□□□□ -1.67
YPT7	YML001W	ESC2	Q06340	456 aa		4.64	□□□□□ -1.67
YPT7	YML001W	URN1	Q06525	465 aa	Known RBP	4.64	□□□□□ -1.67
YPT7	YML001W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
YPT7	YML001W	RAD9	P14737	1309 aa		4.64	□□□□□ -1.67
YPT7	YML001W	DNF2	Q12675	1612 aa		4.64	□□□□□ -1.67
YPT7	YML001W	THS1	P04801	734 aa	Known RBP	4.63	□□□□□ -1.67
YPT7	YML001W	CDC20	P26309	610 aa		4.63	□□□□□ -1.67
YPT7	YML001W	CHZ1	P40019	153 aa	Predicted RBP	4.63	□□□□□ -1.67
YPT7	YML001W	MTC3	P53077	123 aa		4.63	□□□□□ -1.67
YPT7	YML001W	VPS62	P53285	467 aa		4.63	□□□□□ -1.67
YPT7	YML001W	VPS16	Q03308	798 aa		4.63	□□□□□ -1.67
YPT7	YML001W	SVF1	Q05515	481 aa		4.63	□□□□□ -1.67
YPT7	YML001W	YLR225C	Q05948	407 aa	Known RBP	4.63	□□□□□ -1.67
YPT7	YML001W	PIN2	Q12057	282 aa		4.63	□□□□□ -1.67
YPT7	YML001W	CFT1	Q06632	1357 aa	Known RBP	4.63	□□□□□ -1.67
YPT7	YML001W	CLN2	P20438	545 aa		4.62	□□□□□ -1.67
YPT7	YML001W	TAT2	P38967	592 aa		4.62	□□□□□ -1.67
YPT7	YML001W	GDE1	Q02979	1223 aa		4.62	□□□□□ -1.67
YPT7	YML001W	ACK1	Q07622	623 aa	Predicted RBP	4.62	□□□□□ -1.67
YPT7	YML001W	XYL2	Q07993	356 aa		4.62	□□□□□ -1.67
YPT7	YML001W	GPB1	Q08886	897 aa		4.62	□□□□□ -1.67
YPT7	YML001W	MLP1	Q02455	1875 aa	Known RBP	4.62	□□□□□ -1.67
YPT7	YML001W	SCT1	P32784	759 aa		4.61	□□□□□ -1.67
YPT7	YML001W	YKL151C	P36059	337 aa		4.61	□□□□□ -1.67
YPT7	YML001W	YAP3	P38749	330 aa		4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms