RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C LIP5P32875 414 aa4.45□□□□□ -1.7
VPS33YLR396C ENV11P53246 860 aa4.45□□□□□ -1.7
VPS33YLR396C RGA2Q06407 1009 aa4.45□□□□□ -1.7
VPS33YLR396C DOM34P33309 386 aa4.44□□□□□ -1.7
VPS33YLR396C YBR238CP38330 731 aaKnown RBP4.44□□□□□ -1.7
VPS33YLR396C YAP1801P38856 637 aa4.44□□□□□ -1.7
VPS33YLR396C FOL2P51601 243 aaKnown RBP4.44□□□□□ -1.7
VPS33YLR396C YKE2P52553 114 aa4.44□□□□□ -1.7
VPS33YLR396C SIZ1Q04195 904 aa4.44□□□□□ -1.7
VPS33YLR396C TOM70P07213 617 aaKnown RBP4.44□□□□□ -1.7
VPS33YLR396C YER158CP40095 573 aa4.44□□□□□ -1.7
VPS33YLR396C CCM1P48237 864 aaPredicted RBP4.44□□□□□ -1.7
VPS33YLR396C MAL11P53048 616 aa4.44□□□□□ -1.7
VPS33YLR396C SFB2P53953 876 aa4.44□□□□□ -1.7
VPS33YLR396C MSC2Q03455 724 aa4.44□□□□□ -1.7
VPS33YLR396C OSW2Q12202 724 aa4.44□□□□□ -1.7
VPS33YLR396C GLT1Q12680 2145 aaKnown RBP4.43□□□□□ -1.7
VPS33YLR396C MET6P05694 767 aaKnown RBP4.43□□□□□ -1.7
VPS33YLR396C KIN2P13186 1147 aaKnown RBP4.43□□□□□ -1.7
VPS33YLR396C REC104P33323 182 aa4.43□□□□□ -1.7
VPS33YLR396C GDH3P39708 457 aa4.43□□□□□ -1.7
VPS33YLR396C RSM24Q03976 319 aa4.43□□□□□ -1.7
VPS33YLR396C YDL177CQ12257 170 aa4.43□□□□□ -1.7
VPS33YLR396C SRM1P21827 482 aa4.42□□□□□ -1.7
VPS33YLR396C CDC48P25694 835 aaKnown RBP4.42□□□□□ -1.7
VPS33YLR396C APL1P27351 700 aa4.42□□□□□ -1.7
VPS33YLR396C ECM21P38167 1117 aaKnown RBP4.42□□□□□ -1.7
VPS33YLR396C DOS2P54858 310 aa4.42□□□□□ -1.7
VPS33YLR396C THI4P32318 326 aa4.42□□□□□ -1.7
VPS33YLR396C RPC82P32349 654 aa4.42□□□□□ -1.7
VPS33YLR396C ETP1P38748 585 aaKnown RBP4.42□□□□□ -1.7
VPS33YLR396C HSV2P50079 448 aaPredicted RBP4.42□□□□□ -1.7
VPS33YLR396C CYC1P00044 109 aaPredicted RBP4.41□□□□□ -1.7
VPS33YLR396C DFG16Q99234 619 aa4.41□□□□□ -1.7
VPS33YLR396C MSH2P25847 964 aa4.41□□□□□ -1.7
VPS33YLR396C LRG1P35688 1017 aa4.41□□□□□ -1.7
VPS33YLR396C POL12P38121 705 aaPredicted RBP4.41□□□□□ -1.7
VPS33YLR396C POB3Q04636 552 aaKnown RBP4.41□□□□□ -1.7
VPS33YLR396C ENV7Q12003 364 aa4.41□□□□□ -1.7
VPS33YLR396C MAC1P35192 417 aa4.4□□□□□ -1.71
VPS33YLR396C SPC42P36094 363 aa4.4□□□□□ -1.71
VPS33YLR396C GYP8P43570 497 aa4.4□□□□□ -1.71
VPS33YLR396C ALG2P43636 503 aa4.4□□□□□ -1.71
VPS33YLR396C YPR196WQ06595 470 aa4.4□□□□□ -1.71
VPS33YLR396C CMP2P14747 604 aa4.39□□□□□ -1.71
VPS33YLR396C BRN1P38170 754 aa4.39□□□□□ -1.71
VPS33YLR396C VTS1Q08831 523 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
VPS33YLR396C GAL10P04397 699 aa4.39□□□□□ -1.71
VPS33YLR396C YGR283CP53336 341 aaPredicted RBP4.39□□□□□ -1.71
VPS33YLR396C SNO2P53823 222 aa4.39□□□□□ -1.71
VPS33YLR396C CDA1Q06702 301 aa4.39□□□□□ -1.71
VPS33YLR396C MDM12Q92328 271 aa4.39□□□□□ -1.71
VPS33YLR396C PHR1P05066 565 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
VPS33YLR396C SRP101P32916 621 aa4.38□□□□□ -1.71
VPS33YLR396C SPC29P33419 253 aa4.38□□□□□ -1.71
VPS33YLR396C EMC3P36039 253 aa4.37□□□□□ -1.71
VPS33YLR396C MNN1P39106 762 aa4.37□□□□□ -1.71
VPS33YLR396C ECL1P48235 211 aa4.37□□□□□ -1.71
VPS33YLR396C YGR012WP53206 393 aa4.37□□□□□ -1.71
VPS33YLR396C UGO1Q03327 502 aa4.37□□□□□ -1.71
VPS33YLR396C PLB2Q03674 706 aa4.37□□□□□ -1.71
VPS33YLR396C NTG2Q08214 380 aa4.37□□□□□ -1.71
VPS33YLR396C RAD53P22216 821 aa4.37□□□□□ -1.71
VPS33YLR396C MEF1P25039 761 aa4.37□□□□□ -1.71
VPS33YLR396C FPR3P38911 411 aaKnown RBP4.37□□□□□ -1.71
VPS33YLR396C ZRG8P40021 1076 aa4.37□□□□□ -1.71
VPS33YLR396C MND2P40577 368 aa4.37□□□□□ -1.71
VPS33YLR396C MRPL22P53881 309 aa4.37□□□□□ -1.71
VPS33YLR396C SGD1Q06132 899 aa4.37□□□□□ -1.71
VPS33YLR396C NOT3P06102 836 aaKnown RBP4.36□□□□□ -1.71
VPS33YLR396C MPH2P0CD99 609 aa4.36□□□□□ -1.71
VPS33YLR396C HSF1P10961 833 aa4.36□□□□□ -1.71
VPS33YLR396C TSA1P34760 196 aaKnown RBP4.36□□□□□ -1.71
VPS33YLR396C TY4A-JP47023 414 aa4.36□□□□□ -1.71
VPS33YLR396C NIT3P49954 291 aa4.36□□□□□ -1.71
VPS33YLR396C DAM1P53267 343 aa4.36□□□□□ -1.71
VPS33YLR396C PEX6P33760 1030 aa4.36□□□□□ -1.71
VPS33YLR396C STE13P33894 931 aa4.36□□□□□ -1.71
VPS33YLR396C SEG2P34250 1132 aa4.36□□□□□ -1.71
VPS33YLR396C LAM1P38851 1228 aa4.36□□□□□ -1.71
VPS33YLR396C RAI1P53063 387 aaKnown RBP4.36□□□□□ -1.71
VPS33YLR396C ATP25Q03153 612 aa4.36□□□□□ -1.71
VPS33YLR396C ENA1P13587 1091 aa4.35□□□□□ -1.71
VPS33YLR396C ENA2Q01896 1091 aa4.35□□□□□ -1.71
VPS33YLR396C ROT1Q03691 256 aa4.35□□□□□ -1.71
VPS33YLR396C ENA5Q12691 1091 aa4.35□□□□□ -1.71
VPS33YLR396C NOP14Q99207 810 aaKnown RBP4.35□□□□□ -1.71
VPS33YLR396C RFA1P22336 621 aaKnown RBP4.34□□□□□ -1.71
VPS33YLR396C URA1P28272 314 aaPredicted RBP4.34□□□□□ -1.71
VPS33YLR396C UTP14Q04500 899 aaKnown RBP4.34□□□□□ -1.71
VPS33YLR396C DUS4Q06063 367 aa4.34□□□□□ -1.71
VPS33YLR396C CDC6P09119 513 aa4.34□□□□□ -1.71
VPS33YLR396C MEF2P39677 819 aa4.34□□□□□ -1.71
VPS33YLR396C HDA1P53973 706 aa4.34□□□□□ -1.71
VPS33YLR396C YDR132CQ03900 495 aa4.34□□□□□ -1.71
VPS33YLR396C ADY3Q07732 790 aa4.34□□□□□ -1.71
VPS33YLR396C MET7Q08645 548 aa4.34□□□□□ -1.71
VPS33YLR396C SPE1P08432 466 aa4.33□□□□□ -1.72
VPS33YLR396C VBA3P25594 458 aa4.33□□□□□ -1.72
VPS33YLR396C MTC2P34246 357 aa4.33□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms