RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W CDC53Q12018 815 aaKnown RBP5.07□□□□□ -1.6
VPS38YLR360W YPR071WQ12346 211 aa5.07□□□□□ -1.6
VPS38YLR360W NPP1P25353 742 aa5.06□□□□□ -1.6
VPS38YLR360W THI80P35202 319 aa5.06□□□□□ -1.6
VPS38YLR360W POA1P38218 177 aa5.06□□□□□ -1.6
VPS38YLR360W YER158CP40095 573 aa5.06□□□□□ -1.6
VPS38YLR360W MND2P40577 368 aa5.06□□□□□ -1.6
VPS38YLR360W YGR012WP53206 393 aa5.06□□□□□ -1.6
VPS38YLR360W DUS4Q06063 367 aa5.06□□□□□ -1.6
VPS38YLR360W FLC1Q08967 793 aa5.06□□□□□ -1.6
VPS38YLR360W CIT1P00890 479 aa5.05□□□□□ -1.6
VPS38YLR360W CDC48P25694 835 aaKnown RBP5.05□□□□□ -1.6
VPS38YLR360W SRP40P32583 406 aaPredicted RBP5.05□□□□□ -1.6
VPS38YLR360W TSL1P38427 1098 aaKnown RBP5.05□□□□□ -1.6
VPS38YLR360W SIT1P39980 628 aa5.05□□□□□ -1.6
VPS38YLR360W HUL4P40985 892 aa5.05□□□□□ -1.6
VPS38YLR360W YDR132CQ03900 495 aa5.05□□□□□ -1.6
VPS38YLR360W NSE3Q05541 303 aa5.05□□□□□ -1.6
VPS38YLR360W TPO1Q07824 586 aa5.05□□□□□ -1.6
VPS38YLR360W YOL098CQ12496 1037 aa5.05□□□□□ -1.6
VPS38YLR360W YKR078WP36158 585 aaKnown RBP5.04□□□□□ -1.6
VPS38YLR360W ERT1P38140 529 aa5.04□□□□□ -1.6
VPS38YLR360W IOC3P43596 787 aa5.04□□□□□ -1.6
VPS38YLR360W LCD1Q04377 747 aa5.04□□□□□ -1.6
VPS38YLR360W BDF2Q07442 638 aa5.04□□□□□ -1.6
VPS38YLR360W ACK1Q07622 623 aaPredicted RBP5.04□□□□□ -1.6
VPS38YLR360W HBN1Q96VH4 193 aa5.04□□□□□ -1.6
VPS38YLR360W YLR358CO13565 187 aa5.03□□□□□ -1.6
VPS38YLR360W HSF1P10961 833 aa5.03□□□□□ -1.6
VPS38YLR360W STI1P15705 589 aaKnown RBP RIP-Chip data5.03□□□□□ -1.6not detected
VPS38YLR360W EMC1P25574 760 aa5.03□□□□□ -1.6
VPS38YLR360W AFR1P33304 620 aa5.03□□□□□ -1.6
VPS38YLR360W YHR020WP38708 688 aaKnown RBP5.03□□□□□ -1.6
VPS38YLR360W CCM1P48237 864 aaPredicted RBP5.03□□□□□ -1.6
VPS38YLR360W PSP2P50109 593 aaKnown RBP5.03□□□□□ -1.6
VPS38YLR360W YDL124WQ07551 312 aaKnown RBP5.03□□□□□ -1.6
VPS38YLR360W YOR131CQ12486 218 aa5.03□□□□□ -1.6
VPS38YLR360W RPC82P32349 654 aa5.02□□□□□ -1.61
VPS38YLR360W SCT1P32784 759 aa5.02□□□□□ -1.61
VPS38YLR360W REC104P33323 182 aa5.02□□□□□ -1.61
VPS38YLR360W RSP5P39940 809 aaKnown RBP5.02□□□□□ -1.61
VPS38YLR360W TOK1P40310 691 aa5.02□□□□□ -1.61
VPS38YLR360W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
VPS38YLR360W YAP6Q03935 383 aa5.02□□□□□ -1.61
VPS38YLR360W CDA1Q06702 301 aa5.02□□□□□ -1.61
VPS38YLR360W HMI1Q12039 706 aa5.02□□□□□ -1.61
VPS38YLR360W TOP3P13099 656 aa5.01□□□□□ -1.61
VPS38YLR360W PRE10P21242 288 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
VPS38YLR360W CDC20P26309 610 aa5.01□□□□□ -1.61
VPS38YLR360W YKL091CP33324 310 aaKnown RBP5.01□□□□□ -1.61
VPS38YLR360W OCA5P38738 679 aa5.01□□□□□ -1.61
VPS38YLR360W VPS62P53285 467 aa5.01□□□□□ -1.61
VPS38YLR360W NOT3P06102 836 aaKnown RBP5□□□□□ -1.61
VPS38YLR360W CDC6P09119 513 aa5□□□□□ -1.61
VPS38YLR360W MSD1P15179 658 aaKnown RBP5□□□□□ -1.61
VPS38YLR360W RFA1P22336 621 aaKnown RBP5□□□□□ -1.61
VPS38YLR360W DOM34P33309 386 aa5□□□□□ -1.61
VPS38YLR360W PET10P36139 283 aa5□□□□□ -1.61
VPS38YLR360W MET12P46151 657 aa5□□□□□ -1.61
VPS38YLR360W RAI1P53063 387 aaKnown RBP5□□□□□ -1.61
VPS38YLR360W TAF8Q03750 510 aa5□□□□□ -1.61
VPS38YLR360W YLR224WQ05947 369 aa5□□□□□ -1.61
VPS38YLR360W ADY3Q07732 790 aa5□□□□□ -1.61
VPS38YLR360W ESC8Q08119 714 aa5□□□□□ -1.61
VPS38YLR360W CAN1P04817 590 aa4.99□□□□□ -1.61
VPS38YLR360W TOM70P07213 617 aaKnown RBP4.99□□□□□ -1.61
VPS38YLR360W SPE1P08432 466 aa4.99□□□□□ -1.61
VPS38YLR360W FLR1P38124 548 aa4.99□□□□□ -1.61
VPS38YLR360W GGA2P38817 585 aaKnown RBP4.99□□□□□ -1.61
VPS38YLR360W YKE2P52553 114 aa4.99□□□□□ -1.61
VPS38YLR360W VPS30Q02948 557 aa4.99□□□□□ -1.61
VPS38YLR360W BUL2Q03758 920 aaKnown RBP4.99□□□□□ -1.61
VPS38YLR360W RPP2AP05319 106 aaKnown RBP4.98□□□□□ -1.61
VPS38YLR360W HIS5P07172 385 aa4.98□□□□□ -1.61
VPS38YLR360W GAL11P19659 1081 aa4.98□□□□□ -1.61
VPS38YLR360W MPT5P39016 859 aaKnown RBP RIP-Chip data4.98□□□□□ -1.61not detected
VPS38YLR360W CEP3P40969 608 aa4.98□□□□□ -1.61
VPS38YLR360W TMA10Q06177 86 aa4.98□□□□□ -1.61
VPS38YLR360W NOP12Q08208 459 aaKnown RBP4.98□□□□□ -1.61
VPS38YLR360W YKL222CP35995 705 aa4.97□□□□□ -1.61
VPS38YLR360W BET3P36149 193 aa4.97□□□□□ -1.61
VPS38YLR360W PLB1P39105 664 aa4.97□□□□□ -1.61
VPS38YLR360W UBP6P43593 499 aaKnown RBP4.97□□□□□ -1.61
VPS38YLR360W TAF1P46677 1066 aa4.97□□□□□ -1.61
VPS38YLR360W CLU1Q03690 1277 aaKnown RBP4.97□□□□□ -1.61
VPS38YLR360W WHI4Q07655 649 aaKnown RBP4.97□□□□□ -1.61
VPS38YLR360W LST4P34239 828 aa4.97□□□□□ -1.61
VPS38YLR360W ATG19P35193 415 aa4.97□□□□□ -1.61
VPS38YLR360W YBR238CP38330 731 aaKnown RBP4.97□□□□□ -1.61
VPS38YLR360W RTA1P53047 317 aa4.97□□□□□ -1.61
VPS38YLR360W MCM6P53091 1017 aaKnown RBP4.97□□□□□ -1.61
VPS38YLR360W RPD3P32561 433 aa4.96□□□□□ -1.62
VPS38YLR360W STE13P33894 931 aa4.96□□□□□ -1.62
VPS38YLR360W GIP4P39732 760 aa4.96□□□□□ -1.62
VPS38YLR360W CHZ1P40019 153 aaPredicted RBP4.96□□□□□ -1.62
VPS38YLR360W NIT3P49954 291 aa4.96□□□□□ -1.62
VPS38YLR360W SSL1Q04673 461 aaPredicted RBP4.96□□□□□ -1.62
VPS38YLR360W RPS9AO13516 197 aaKnown RBP4.95□□□□□ -1.62
VPS38YLR360W SHM2P37291 469 aaKnown RBP4.95□□□□□ -1.62
VPS38YLR360W CHA4P43634 648 aa4.95□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 39.8 ms