RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB5	YLR260W	SPC105	P53148	917 aa		4.08	□□□□□ -1.76
LCB5	YLR260W	YGR125W	P53273	1036 aa		4.08	□□□□□ -1.76
LCB5	YLR260W	ALO1	P54783	526 aa	Known RBP	4.08	□□□□□ -1.76
LCB5	YLR260W	UBX2	Q04228	584 aa		4.08	□□□□□ -1.76
LCB5	YLR260W	PHM6	Q05637	104 aa		4.08	□□□□□ -1.76
LCB5	YLR260W	VIP1	Q06685	1146 aa	Known RBP	4.08	□□□□□ -1.76
LCB5	YLR260W	HVG1	P0CE11	249 aa		4.07	□□□□□ -1.76
LCB5	YLR260W	HOM3	P10869	527 aa		4.07	□□□□□ -1.76
LCB5	YLR260W	SST2	P11972	698 aa	Known RBP	4.07	□□□□□ -1.76
LCB5	YLR260W	MEP1	P40260	492 aa		4.07	□□□□□ -1.76
LCB5	YLR260W	YIL092W	P40497	633 aa		4.07	□□□□□ -1.76
LCB5	YLR260W	YJR115W	P47152	169 aa		4.07	□□□□□ -1.76
LCB5	YLR260W	HLJ1	P48353	224 aa		4.07	□□□□□ -1.76
LCB5	YLR260W	RSC1	P53236	928 aa		4.07	□□□□□ -1.76
LCB5	YLR260W	NSG2	P53898	299 aa		4.07	□□□□□ -1.76
LCB5	YLR260W	YNL034W	P53963	612 aa		4.07	□□□□□ -1.76
LCB5	YLR260W	YNL018C	P53976	612 aa		4.07	□□□□□ -1.76
LCB5	YLR260W	CRF1	Q04930	467 aa		4.07	□□□□□ -1.76
LCB5	YLR260W	CSR2	Q12734	1121 aa		4.07	□□□□□ -1.76
LCB5	YLR260W	CAN1	P04817	590 aa		4.07	□□□□□ -1.76
LCB5	YLR260W	RPS19A	P07280	144 aa	Known RBP	4.07	□□□□□ -1.76
LCB5	YLR260W	RPS19B	P07281	144 aa	Predicted RBP	4.07	□□□□□ -1.76
LCB5	YLR260W	SEC18	P18759	758 aa	Known RBP	4.07	□□□□□ -1.76
LCB5	YLR260W	GFD2	P25370	566 aa	Known RBP	4.07	□□□□□ -1.76
LCB5	YLR260W	BRF1	P29056	596 aa		4.07	□□□□□ -1.76
LCB5	YLR260W	MRS6	P32864	603 aa	Known RBP	4.07	□□□□□ -1.76
LCB5	YLR260W	VPS35	P34110	944 aa		4.07	□□□□□ -1.76
LCB5	YLR260W	KTR3	P38130	404 aa	Predicted RBP	4.07	□□□□□ -1.76
LCB5	YLR260W	YBR197C	P38306	217 aa		4.07	□□□□□ -1.76
LCB5	YLR260W	HXT5	P38695	592 aa		4.07	□□□□□ -1.76
LCB5	YLR260W	DOT6	P40059	670 aa	Known RBP	4.07	□□□□□ -1.76
LCB5	YLR260W	YGR053C	P53234	283 aa		4.07	□□□□□ -1.76
LCB5	YLR260W	COG6	P53959	839 aa		4.07	□□□□□ -1.76
LCB5	YLR260W	SRP1	Q02821	542 aa	Known RBP	4.07	□□□□□ -1.76
LCB5	YLR260W	ESC2	Q06340	456 aa		4.07	□□□□□ -1.76
LCB5	YLR260W	YOL087C	Q99247	1116 aa		4.07	□□□□□ -1.76
LCB5	YLR260W	CCP1	P00431	361 aa		4.06	□□□□□ -1.76
LCB5	YLR260W	CDC34	P14682	295 aa		4.06	□□□□□ -1.76
LCB5	YLR260W	ABZ1	P37254	787 aa	Predicted RBP	4.06	□□□□□ -1.76
LCB5	YLR260W	FAA3	P39002	694 aa		4.06	□□□□□ -1.76
LCB5	YLR260W	SSN3	P39073	555 aa		4.06	□□□□□ -1.76
LCB5	YLR260W	FUN12	P39730	1002 aa	Known RBP	4.06	□□□□□ -1.76
LCB5	YLR260W	YIR042C	P40586	236 aa		4.06	□□□□□ -1.76
LCB5	YLR260W	SRB7	P47822	140 aa		4.06	□□□□□ -1.76
LCB5	YLR260W	GPI8	P49018	411 aa		4.06	□□□□□ -1.76
LCB5	YLR260W	PIP2	P52960	996 aa		4.06	□□□□□ -1.76
LCB5	YLR260W	GPG1	P53130	126 aa		4.06	□□□□□ -1.76
LCB5	YLR260W	YNL193W	P53870	558 aa		4.06	□□□□□ -1.76
LCB5	YLR260W	TFB2	Q02939	513 aa		4.06	□□□□□ -1.76
LCB5	YLR260W	RPN7	Q06103	429 aa	Known RBP	4.06	□□□□□ -1.76
LCB5	YLR260W	PSR1	Q07800	427 aa		4.06	□□□□□ -1.76
LCB5	YLR260W	CDC45	Q08032	650 aa		4.06	□□□□□ -1.76
LCB5	YLR260W	TOM1	Q03280	3268 aa		4.06	□□□□□ -1.76
LCB5	YLR260W	CDC31	P06704	161 aa	Known RBP	4.06	□□□□□ -1.76
LCB5	YLR260W	SNF3	P10870	884 aa		4.06	□□□□□ -1.76
LCB5	YLR260W	NPR1	P22211	790 aa		4.06	□□□□□ -1.76
LCB5	YLR260W	ISC10	P32645	267 aa		4.06	□□□□□ -1.76
LCB5	YLR260W	DLD1	P32891	587 aa		4.06	□□□□□ -1.76
LCB5	YLR260W	YBR071W	P38243	211 aa		4.06	□□□□□ -1.76
LCB5	YLR260W	YHL008C	P38750	627 aa		4.06	□□□□□ -1.76
LCB5	YLR260W	KEL1	P38853	1164 aa	Known RBP	4.06	□□□□□ -1.76
LCB5	YLR260W	YFH7	P43591	353 aa		4.06	□□□□□ -1.76
LCB5	YLR260W	PMT3	P47190	753 aa		4.06	□□□□□ -1.76
LCB5	YLR260W	PEX14	P53112	341 aa		4.06	□□□□□ -1.76
LCB5	YLR260W	INM2	Q05533	292 aa		4.06	□□□□□ -1.76
LCB5	YLR260W	HXK1	P04806	485 aa	Known RBP	4.05	□□□□□ -1.76
LCB5	YLR260W	SPS1	P08458	490 aa		4.05	□□□□□ -1.76
LCB5	YLR260W	STE5	P32917	917 aa		4.05	□□□□□ -1.76
LCB5	YLR260W	APE4	P38821	490 aa		4.05	□□□□□ -1.76
LCB5	YLR260W	JJJ2	P46997	583 aa		4.05	□□□□□ -1.76
LCB5	YLR260W	BNA1	P47096	177 aa		4.05	□□□□□ -1.76
LCB5	YLR260W	YNL165W	P53891	406 aa		4.05	□□□□□ -1.76
LCB5	YLR260W	THI73	Q07904	523 aa		4.05	□□□□□ -1.76
LCB5	YLR260W	OXR1	Q08952	273 aa		4.05	□□□□□ -1.76
LCB5	YLR260W	URA1	P28272	314 aa	Predicted RBP	4.04	□□□□□ -1.76
LCB5	YLR260W	DUT1	P33317	147 aa		4.04	□□□□□ -1.76
LCB5	YLR260W	SCD5	P34758	872 aa		4.04	□□□□□ -1.76
LCB5	YLR260W	MOT2	P34909	587 aa	Known RBP	4.04	□□□□□ -1.76
LCB5	YLR260W	PTK1	P36002	662 aa	Predicted RBP	4.04	□□□□□ -1.76
LCB5	YLR260W	RRN3	P36070	627 aa		4.04	□□□□□ -1.76
LCB5	YLR260W	YBR184W	P38299	523 aa		4.04	□□□□□ -1.76
LCB5	YLR260W	TAF1	P46677	1066 aa		4.04	□□□□□ -1.76
LCB5	YLR260W	UBA2	P52488	636 aa		4.04	□□□□□ -1.76
LCB5	YLR260W	HOL1	P53389	586 aa		4.04	□□□□□ -1.76
LCB5	YLR260W	MET14	Q02196	202 aa		4.04	□□□□□ -1.76
LCB5	YLR260W	YML131W	Q03102	365 aa		4.04	□□□□□ -1.76
LCB5	YLR260W	PRP3	Q03338	469 aa	Predicted RBP	4.04	□□□□□ -1.76
LCB5	YLR260W	YLR352W	Q06479	807 aa		4.04	□□□□□ -1.76
LCB5	YLR260W	GAL1	P04385	528 aa		4.04	□□□□□ -1.76
LCB5	YLR260W	RPB10	P22139	70 aa		4.04	□□□□□ -1.76
LCB5	YLR260W	EUG1	P32474	517 aa		4.04	□□□□□ -1.76
LCB5	YLR260W	GCD7	P32502	381 aa	Predicted RBP	4.04	□□□□□ -1.76
LCB5	YLR260W	ANP1	P32629	500 aa		4.04	□□□□□ -1.76
LCB5	YLR260W	SHM1	P37292	490 aa	Predicted RBP	4.04	□□□□□ -1.76
LCB5	YLR260W	GGA2	P38817	585 aa	Known RBP	4.04	□□□□□ -1.76
LCB5	YLR260W	ALA1	P40825	983 aa	Known RBP	4.04	□□□□□ -1.76
LCB5	YLR260W	YJR098C	P47139	656 aa		4.04	□□□□□ -1.76
LCB5	YLR260W	SPO1	P53541	631 aa		4.04	□□□□□ -1.76
LCB5	YLR260W	UFD2	P54860	961 aa		4.04	□□□□□ -1.76
LCB5	YLR260W	UME1	Q03010	460 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 56.3 ms