RNA–Protein interactions for RNA: YLR228C

ECM22, Transcript of Sterol regulatory element binding protein, yeastyeast

Gene ECM22, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM22YLR228C MTF2P10849 440 aa4.29□□□□□ -1.72
ECM22YLR228C RSR1P13856 272 aa4.29□□□□□ -1.72
ECM22YLR228C THR1P17423 357 aaKnown RBP4.29□□□□□ -1.72
ECM22YLR228C SEC20P28791 383 aa4.29□□□□□ -1.72
ECM22YLR228C MCM4P30665 933 aaKnown RBP4.29□□□□□ -1.72
ECM22YLR228C VPH2P32341 215 aa4.29□□□□□ -1.72
ECM22YLR228C SRB4P32569 687 aa4.29□□□□□ -1.72
ECM22YLR228C PTC3P34221 468 aaKnown RBP4.29□□□□□ -1.72
ECM22YLR228C LAS1P36146 502 aaPredicted RBP4.29□□□□□ -1.72
ECM22YLR228C PPX1P38698 397 aa4.29□□□□□ -1.72
ECM22YLR228C CCT2P39076 527 aaKnown RBP4.29□□□□□ -1.72
ECM22YLR228C PDS1P40316 373 aaPredicted RBP4.29□□□□□ -1.72
ECM22YLR228C EFM4P40516 257 aa4.29□□□□□ -1.72
ECM22YLR228C SAP185P40856 1058 aa4.29□□□□□ -1.72
ECM22YLR228C BUD6P41697 788 aa4.29□□□□□ -1.72
ECM22YLR228C JJJ2P46997 583 aa4.29□□□□□ -1.72
ECM22YLR228C SGM1P47166 707 aa4.29□□□□□ -1.72
ECM22YLR228C YGR266WP53326 701 aa4.29□□□□□ -1.72
ECM22YLR228C COP1P53622 1201 aaKnown RBP4.29□□□□□ -1.72
ECM22YLR228C APP1P53933 587 aa4.29□□□□□ -1.72
ECM22YLR228C CIK1Q01649 594 aa4.29□□□□□ -1.72
ECM22YLR228C YPQ2Q06328 317 aa4.29□□□□□ -1.72
ECM22YLR228C YLR001CQ07895 862 aa4.29□□□□□ -1.72
ECM22YLR228C NSE1Q07913 336 aa4.29□□□□□ -1.72
ECM22YLR228C RRP6Q12149 733 aaKnown RBP4.29□□□□□ -1.72
ECM22YLR228C HIS3P06633 220 aa4.28□□□□□ -1.72
ECM22YLR228C RPS6AP0CX37 236 aaKnown RBP4.28□□□□□ -1.72
ECM22YLR228C RPS6BP0CX38 236 aaPredicted RBP4.28□□□□□ -1.72
ECM22YLR228C ADE2P21264 571 aaKnown RBP4.28□□□□□ -1.72
ECM22YLR228C PWP1P21304 576 aaKnown RBP4.28□□□□□ -1.72
ECM22YLR228C SEC15P22224 910 aa4.28□□□□□ -1.72
ECM22YLR228C HIR2P32480 875 aa4.28□□□□□ -1.72
ECM22YLR228C SAC6P32599 642 aaKnown RBP4.28□□□□□ -1.72
ECM22YLR228C RAD24P32641 659 aa4.28□□□□□ -1.72
ECM22YLR228C ADE17P38009 592 aaKnown RBP4.28□□□□□ -1.72
ECM22YLR228C TBS1P38114 1094 aa4.28□□□□□ -1.72
ECM22YLR228C VMA22P38784 181 aa4.28□□□□□ -1.72
ECM22YLR228C MET18P40469 1032 aa4.28□□□□□ -1.72
ECM22YLR228C SPO22P40511 975 aa4.28□□□□□ -1.72
ECM22YLR228C BUB1P41695 1021 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72not detected
ECM22YLR228C STB2P46679 850 aa4.28□□□□□ -1.72
ECM22YLR228C ESBP6P53918 673 aa4.28□□□□□ -1.72
ECM22YLR228C DMA2P53924 522 aa4.28□□□□□ -1.72
ECM22YLR228C PKH1Q03407 766 aa4.28□□□□□ -1.72
ECM22YLR228C GFD1Q04839 188 aaKnown RBP4.28□□□□□ -1.72
ECM22YLR228C TAF9Q05027 157 aa4.28□□□□□ -1.72
ECM22YLR228C FUS2Q05670 677 aa4.28□□□□□ -1.72
ECM22YLR228C ATG13Q06628 738 aa4.28□□□□□ -1.72
ECM22YLR228C AFT2Q08957 416 aa4.28□□□□□ -1.72
ECM22YLR228C TAF10Q12030 206 aa4.28□□□□□ -1.72
ECM22YLR228C TOM70P07213 617 aaKnown RBP4.27□□□□□ -1.73
ECM22YLR228C DPB2P24482 689 aaPredicted RBP4.27□□□□□ -1.73
ECM22YLR228C KIP1P28742 1111 aa4.27□□□□□ -1.73
ECM22YLR228C SIN4P32259 974 aa4.27□□□□□ -1.73
ECM22YLR228C GCD7P32502 381 aaPredicted RBP4.27□□□□□ -1.73
ECM22YLR228C RLP7P40693 322 aaKnown RBP4.27□□□□□ -1.73
ECM22YLR228C FYV8P46949 817 aaKnown RBP4.27□□□□□ -1.73
ECM22YLR228C ECL1P48235 211 aa4.27□□□□□ -1.73
ECM22YLR228C MSN5P52918 1224 aa4.27□□□□□ -1.73
ECM22YLR228C MON1P53129 644 aa4.27□□□□□ -1.73
ECM22YLR228C NOP15P53927 220 aaPredicted RBP4.27□□□□□ -1.73
ECM22YLR228C ERG5P54781 538 aa4.27□□□□□ -1.73
ECM22YLR228C NGL3Q03210 505 aa4.27□□□□□ -1.73
ECM22YLR228C VPS16Q03308 798 aa4.27□□□□□ -1.73
ECM22YLR228C OPY2Q06810 360 aa4.27□□□□□ -1.73
ECM22YLR228C GPN2Q08726 347 aaPredicted RBP4.27□□□□□ -1.73
ECM22YLR228C VIK1Q12045 647 aa4.27□□□□□ -1.73
ECM22YLR228C YPR089WO13585 888 aa4.27□□□□□ -1.73
ECM22YLR228C PIF1P07271 859 aa4.27□□□□□ -1.73
ECM22YLR228C SSC1P0CS90 654 aaKnown RBP4.27□□□□□ -1.73
ECM22YLR228C RGP1P16664 663 aa4.27□□□□□ -1.73
ECM22YLR228C SEC2P17065 759 aa4.27□□□□□ -1.73
ECM22YLR228C VPS1P21576 704 aaKnown RBP4.27□□□□□ -1.73
ECM22YLR228C YKL091CP33324 310 aaKnown RBP4.27□□□□□ -1.73
ECM22YLR228C PXL1P36166 706 aa4.27□□□□□ -1.73
ECM22YLR228C SHM1P37292 490 aaPredicted RBP4.27□□□□□ -1.73
ECM22YLR228C YHL017WP38745 532 aa4.27□□□□□ -1.73
ECM22YLR228C GPD2P41911 440 aaKnown RBP4.27□□□□□ -1.73
ECM22YLR228C RAT1Q02792 1006 aaKnown RBP4.27□□□□□ -1.73
ECM22YLR228C VPS64Q03944 604 aa4.27□□□□□ -1.73
ECM22YLR228C YLR287CQ05881 355 aa4.27□□□□□ -1.73
ECM22YLR228C PGA3Q12746 312 aaKnown RBP4.27□□□□□ -1.73
ECM22YLR228C REP1P03871 373 aa4.26□□□□□ -1.73
ECM22YLR228C RPL24AP04449 155 aaKnown RBP4.26□□□□□ -1.73
ECM22YLR228C BAS1P22035 811 aa4.26□□□□□ -1.73
ECM22YLR228C AMS1P22855 1083 aa4.26□□□□□ -1.73
ECM22YLR228C MRPL25P23369 157 aa4.26□□□□□ -1.73
ECM22YLR228C RAD57P25301 460 aa4.26□□□□□ -1.73
ECM22YLR228C ADY2P25613 283 aa4.26□□□□□ -1.73
ECM22YLR228C ITR2P30606 609 aa4.26□□□□□ -1.73
ECM22YLR228C SMC1P32908 1225 aa4.26□□□□□ -1.73
ECM22YLR228C RPC34P32910 317 aa4.26□□□□□ -1.73
ECM22YLR228C MRP8P35719 219 aa4.26□□□□□ -1.73
ECM22YLR228C YBR242WP38331 238 aa4.26□□□□□ -1.73
ECM22YLR228C CIC1P38779 376 aaKnown RBP4.26□□□□□ -1.73
ECM22YLR228C SHQ1P40486 507 aaPredicted RBP4.26□□□□□ -1.73
ECM22YLR228C HAM1P47119 197 aaKnown RBP4.26□□□□□ -1.73
ECM22YLR228C RNR4P49723 345 aaKnown RBP4.26□□□□□ -1.73
ECM22YLR228C MRPS35P53292 345 aa4.26□□□□□ -1.73
ECM22YLR228C RSM28Q03430 361 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 35.1 ms