RNA–Protein interactions for RNA: YLR035C-A

YLR035C-A, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR035C-A, Length 3,468 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR035C-AYLR035C-A DAS1P47005 663 aa2.18□□□□□ -2.06
YLR035C-AYLR035C-A CRR1Q05790 422 aa2.18□□□□□ -2.06
YLR035C-AYLR035C-A RIB2Q12362 591 aaKnown RBP2.18□□□□□ -2.06
YLR035C-AYLR035C-A RKM4Q12504 494 aa2.18□□□□□ -2.06
YLR035C-AYLR035C-A FUN12P39730 1002 aaKnown RBP2.18□□□□□ -2.06
YLR035C-AYLR035C-A RKM2Q03942 479 aa2.18□□□□□ -2.06
YLR035C-AYLR035C-A FLC1Q08967 793 aa2.18□□□□□ -2.06
YLR035C-AYLR035C-A RPS9AO13516 197 aaKnown RBP2.18□□□□□ -2.06
YLR035C-AYLR035C-A SUI2P20459 304 aaKnown RBP2.18□□□□□ -2.06
YLR035C-AYLR035C-A LAM1P38851 1228 aa2.18□□□□□ -2.06
YLR035C-AYLR035C-A TOK1P40310 691 aa2.18□□□□□ -2.06
YLR035C-AYLR035C-A NAN1Q02931 896 aaKnown RBP2.18□□□□□ -2.06
YLR035C-AYLR035C-A RMD1Q03441 430 aa2.18□□□□□ -2.06
YLR035C-AYLR035C-A FMP25Q08023 583 aa2.18□□□□□ -2.06
YLR035C-AYLR035C-A ACM1Q08981 209 aa2.18□□□□□ -2.06
YLR035C-AYLR035C-A KIN2P13186 1147 aaKnown RBP2.17□□□□□ -2.06
YLR035C-AYLR035C-A YCL002CP25565 263 aa2.17□□□□□ -2.06
YLR035C-AYLR035C-A RFC1P38630 861 aaKnown RBP2.17□□□□□ -2.06
YLR035C-AYLR035C-A RTA1P53047 317 aa2.17□□□□□ -2.06
YLR035C-AYLR035C-A ERO1Q03103 563 aa2.17□□□□□ -2.06
YLR035C-AYLR035C-A ISA1Q07821 250 aaPredicted RBP2.17□□□□□ -2.06
YLR035C-AYLR035C-A YOR022CQ12204 715 aa2.17□□□□□ -2.06
YLR035C-AYLR035C-A SGS1P35187 1447 aa2.17□□□□□ -2.06
YLR035C-AYLR035C-A PIK1P39104 1066 aa2.17□□□□□ -2.06
YLR035C-AYLR035C-A PEA2P40091 420 aa2.17□□□□□ -2.06
YLR035C-AYLR035C-A YIL108WP40483 696 aaKnown RBP2.17□□□□□ -2.06
YLR035C-AYLR035C-A MCM6P53091 1017 aaKnown RBP2.17□□□□□ -2.06
YLR035C-AYLR035C-A SRT1Q03175 343 aa2.17□□□□□ -2.06
YLR035C-AYLR035C-A AGP1P25376 633 aa2.16□□□□□ -2.06
YLR035C-AYLR035C-A POA1P38218 177 aa2.16□□□□□ -2.06
YLR035C-AYLR035C-A MEF2P39677 819 aa2.16□□□□□ -2.06
YLR035C-AYLR035C-A MDM38Q08179 573 aa2.16□□□□□ -2.06
YLR035C-AYLR035C-A RNA1P11745 407 aaKnown RBP2.16□□□□□ -2.06
YLR035C-AYLR035C-A ACE2P21192 770 aa2.16□□□□□ -2.06
YLR035C-AYLR035C-A RPL8BP29453 256 aaKnown RBP2.16□□□□□ -2.06
YLR035C-AYLR035C-A DSS1P39112 969 aa2.16□□□□□ -2.06
YLR035C-AYLR035C-A YER158CP40095 573 aa2.16□□□□□ -2.06
YLR035C-AYLR035C-A PHO23P50947 330 aa2.16□□□□□ -2.06
YLR035C-AYLR035C-A YDL124WQ07551 312 aaKnown RBP2.16□□□□□ -2.06
YLR035C-AYLR035C-A SPO75Q07798 868 aa2.16□□□□□ -2.06
YLR035C-AYLR035C-A PLP2Q12017 286 aa2.16□□□□□ -2.06
YLR035C-AYLR035C-A SRO9P25567 434 aaKnown RBP2.16□□□□□ -2.06
YLR035C-AYLR035C-A RPS0AP32905 252 aaKnown RBP2.16□□□□□ -2.06
YLR035C-AYLR035C-A PIN4P34217 668 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
YLR035C-AYLR035C-A SEC26P41810 973 aaKnown RBP2.16□□□□□ -2.06
YLR035C-AYLR035C-A HBN1Q96VH4 193 aa2.16□□□□□ -2.06
YLR035C-AYLR035C-A MDS3P53094 1487 aa2.16□□□□□ -2.06
YLR035C-AYLR035C-A NOT3P06102 836 aaKnown RBP2.15□□□□□ -2.06
YLR035C-AYLR035C-A HSP60P19882 572 aaKnown RBP2.15□□□□□ -2.06
YLR035C-AYLR035C-A GFD2P25370 566 aaKnown RBP2.15□□□□□ -2.06
YLR035C-AYLR035C-A SBA1P28707 216 aaKnown RBP2.15□□□□□ -2.06
YLR035C-AYLR035C-A BET3P36149 193 aa2.15□□□□□ -2.06
YLR035C-AYLR035C-A YBR238CP38330 731 aaKnown RBP2.15□□□□□ -2.06
YLR035C-AYLR035C-A GIC1P38785 314 aa2.15□□□□□ -2.06
YLR035C-AYLR035C-A RSP5P39940 809 aaKnown RBP2.15□□□□□ -2.06
YLR035C-AYLR035C-A HUL4P40985 892 aa2.15□□□□□ -2.06
YLR035C-AYLR035C-A PFD1P46988 109 aa2.15□□□□□ -2.06
YLR035C-AYLR035C-A RNH70P53331 553 aa2.15□□□□□ -2.06
YLR035C-AYLR035C-A SGD1Q06132 899 aa2.15□□□□□ -2.06
YLR035C-AYLR035C-A CIT1P00890 479 aa2.15□□□□□ -2.07
YLR035C-AYLR035C-A PUS2P53167 370 aa2.15□□□□□ -2.07
YLR035C-AYLR035C-A SRP1Q02821 542 aaKnown RBP2.15□□□□□ -2.07
YLR035C-AYLR035C-A LRS4Q04087 347 aaKnown RBP2.15□□□□□ -2.07
YLR035C-AYLR035C-A TPO1Q07824 586 aa2.15□□□□□ -2.07
YLR035C-AYLR035C-A ADE8P04161 214 aa2.15□□□□□ -2.07
YLR035C-AYLR035C-A DAL7P21826 554 aa2.15□□□□□ -2.07
YLR035C-AYLR035C-A YGR012WP53206 393 aa2.15□□□□□ -2.07
YLR035C-AYLR035C-A SNO2P53823 222 aa2.15□□□□□ -2.07
YLR035C-AYLR035C-A CDA2Q06703 312 aa2.15□□□□□ -2.07
YLR035C-AYLR035C-A YGR161W-CQ3E744 92 aa2.15□□□□□ -2.07
YLR035C-AYLR035C-A Q0142Q9ZZW4 58 aa2.15□□□□□ -2.07
YLR035C-AYLR035C-A IRR1P40541 1150 aa2.14□□□□□ -2.07
YLR035C-AYLR035C-A STF1P01098 86 aa2.14□□□□□ -2.07
YLR035C-AYLR035C-A CAN1P04817 590 aa2.14□□□□□ -2.07
YLR035C-AYLR035C-A KAR1P11927 433 aa2.14□□□□□ -2.07
YLR035C-AYLR035C-A MRP8P35719 219 aa2.14□□□□□ -2.07
YLR035C-AYLR035C-A PBP2P38151 413 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
YLR035C-AYLR035C-A PLB1P39105 664 aa2.14□□□□□ -2.07
YLR035C-AYLR035C-A TAF1P46677 1066 aa2.14□□□□□ -2.07
YLR035C-AYLR035C-A ASM4Q05166 528 aa2.14□□□□□ -2.07
YLR035C-AYLR035C-A GPB1Q08886 897 aa2.14□□□□□ -2.07
YLR035C-AYLR035C-A PRC1P00729 532 aa2.14□□□□□ -2.07
YLR035C-AYLR035C-A THI4P32318 326 aa2.14□□□□□ -2.07
YLR035C-AYLR035C-A BLI1P35727 113 aa2.14□□□□□ -2.07
YLR035C-AYLR035C-A PBY1P38254 753 aa2.14□□□□□ -2.07
YLR035C-AYLR035C-A NUP82P40368 713 aa2.14□□□□□ -2.07
YLR035C-AYLR035C-A SHR5P41912 237 aa2.14□□□□□ -2.07
YLR035C-AYLR035C-A SPT7P35177 1332 aa2.13□□□□□ -2.07
YLR035C-AYLR035C-A HBS1P32769 611 aaKnown RBP2.13□□□□□ -2.07
YLR035C-AYLR035C-A MSS4P38994 779 aa2.13□□□□□ -2.07
YLR035C-AYLR035C-A HSV2P50079 448 aaPredicted RBP2.13□□□□□ -2.07
YLR035C-AYLR035C-A MTC3P53077 123 aa2.13□□□□□ -2.07
YLR035C-AYLR035C-A YOL098CQ12496 1037 aa2.13□□□□□ -2.07
YLR035C-AYLR035C-A ESP1Q03018 1630 aa2.13□□□□□ -2.07
YLR035C-AYLR035C-A DOM34P33309 386 aa2.13□□□□□ -2.07
YLR035C-AYLR035C-A SHM2P37291 469 aaKnown RBP2.13□□□□□ -2.07
YLR035C-AYLR035C-A YLR224WQ05947 369 aa2.13□□□□□ -2.07
YLR035C-AYLR035C-A BDF2Q07442 638 aa2.13□□□□□ -2.07
YLR035C-AYLR035C-A SFP1P32432 683 aa2.12□□□□□ -2.07
YLR035C-AYLR035C-A TSL1P38427 1098 aaKnown RBP2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 36 ms