RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C YPT53P36019 220 aa4.58□□□□□ -1.68
SDO1YLR022C MAL31P38156 614 aa4.58□□□□□ -1.68
SDO1YLR022C RPN3P40016 523 aaKnown RBP4.58□□□□□ -1.68
SDO1YLR022C COQ4O13525 335 aa4.57□□□□□ -1.68
SDO1YLR022C NAP1P25293 417 aaKnown RBP4.57□□□□□ -1.68
SDO1YLR022C PAM1P37304 830 aaKnown RBP4.57□□□□□ -1.68
SDO1YLR022C RRT14P40470 206 aa4.57□□□□□ -1.68
SDO1YLR022C RSC58Q07979 502 aa4.57□□□□□ -1.68
SDO1YLR022C SLM3Q12093 417 aa4.57□□□□□ -1.68
SDO1YLR022C RPS13P05756 151 aaKnown RBP4.56□□□□□ -1.68
SDO1YLR022C SNF5P18480 905 aa4.56□□□□□ -1.68
SDO1YLR022C SYP1P25623 870 aaKnown RBP4.56□□□□□ -1.68
SDO1YLR022C CCZ1P38273 704 aa4.56□□□□□ -1.68
SDO1YLR022C RGD1P38339 666 aa4.56□□□□□ -1.68
SDO1YLR022C GPB2P39717 880 aa4.56□□□□□ -1.68
SDO1YLR022C RIM8P53179 542 aa4.56□□□□□ -1.68
SDO1YLR022C TNA1P53322 534 aa4.56□□□□□ -1.68
SDO1YLR022C HOS3Q02959 697 aaKnown RBP4.56□□□□□ -1.68
SDO1YLR022C RCL1Q08096 367 aaPredicted RBP4.56□□□□□ -1.68
SDO1YLR022C NBA1Q08229 501 aaKnown RBP4.56□□□□□ -1.68
SDO1YLR022C YPL277CQ08989 487 aa4.56□□□□□ -1.68
SDO1YLR022C SPO21Q12411 609 aa4.56□□□□□ -1.68
SDO1YLR022C DBP5P20449 482 aaKnown RBP4.55□□□□□ -1.68
SDO1YLR022C ERT1P38140 529 aa4.55□□□□□ -1.68
SDO1YLR022C PIK1P39104 1066 aa4.55□□□□□ -1.68
SDO1YLR022C CHZ1P40019 153 aaPredicted RBP4.55□□□□□ -1.68
SDO1YLR022C CNN1P43618 361 aa4.55□□□□□ -1.68
SDO1YLR022C FOL2P51601 243 aaKnown RBP4.55□□□□□ -1.68
SDO1YLR022C ENV11P53246 860 aa4.55□□□□□ -1.68
SDO1YLR022C OYE2Q03558 400 aaKnown RBP4.55□□□□□ -1.68
SDO1YLR022C GSF2Q04697 403 aaKnown RBP4.55□□□□□ -1.68
SDO1YLR022C RTT10Q08924 1013 aa4.55□□□□□ -1.68
SDO1YLR022C YRF1-3P0CX14 1859 aa4.55□□□□□ -1.68
SDO1YLR022C YRF1-7P0CX15 1859 aa4.55□□□□□ -1.68
SDO1YLR022C YRF1-6P53819 1859 aa4.55□□□□□ -1.68
SDO1YLR022C TOP1P04786 769 aa4.54□□□□□ -1.68
SDO1YLR022C MPH1P40562 993 aa4.54□□□□□ -1.68
SDO1YLR022C UBP3Q01477 912 aaKnown RBP RIP-Chip data4.54□□□□□ -1.68not detected
SDO1YLR022C NYV1Q12255 253 aa4.54□□□□□ -1.68
SDO1YLR022C SOD2P00447 233 aa4.53□□□□□ -1.68
SDO1YLR022C PEP7P32609 515 aa4.53□□□□□ -1.68
SDO1YLR022C DUT1P33317 147 aa4.53□□□□□ -1.68
SDO1YLR022C SNO2P53823 222 aa4.53□□□□□ -1.68
SDO1YLR022C YVH1Q02256 364 aaKnown RBP4.53□□□□□ -1.68
SDO1YLR022C ADE6P38972 1358 aaKnown RBP4.53□□□□□ -1.69
SDO1YLR022C SPS1P08458 490 aa4.52□□□□□ -1.69
SDO1YLR022C PUF4P25339 888 aaKnown RBP RIP-Chip data4.52□□□□□ -1.69not detected
SDO1YLR022C RAD27P26793 382 aa4.52□□□□□ -1.69
SDO1YLR022C RER2P35196 286 aa4.52□□□□□ -1.69
SDO1YLR022C HNT2P49775 206 aa4.52□□□□□ -1.69
SDO1YLR022C TMA46Q12000 345 aaKnown RBP4.52□□□□□ -1.69
SDO1YLR022C RAV1P47104 1357 aa4.52□□□□□ -1.69
SDO1YLR022C YER152CP10356 443 aa4.51□□□□□ -1.69
SDO1YLR022C MLS1P30952 554 aa4.51□□□□□ -1.69
SDO1YLR022C PPH3P32345 308 aa4.51□□□□□ -1.69
SDO1YLR022C PET112P33893 541 aa4.51□□□□□ -1.69
SDO1YLR022C SEC26P41810 973 aaKnown RBP4.51□□□□□ -1.69
SDO1YLR022C NCS6P53088 359 aa4.51□□□□□ -1.69
SDO1YLR022C TIF35Q04067 274 aaKnown RBP4.51□□□□□ -1.69
SDO1YLR022C RIX7Q07844 837 aaKnown RBP4.51□□□□□ -1.69
SDO1YLR022C CDC34P14682 295 aa4.5□□□□□ -1.69
SDO1YLR022C RAD4P14736 754 aa4.5□□□□□ -1.69
SDO1YLR022C MNR2P35724 969 aa4.5□□□□□ -1.69
SDO1YLR022C YIL089WP40500 205 aa4.5□□□□□ -1.69
SDO1YLR022C GNT1Q12096 491 aa4.5□□□□□ -1.69
SDO1YLR022C APC1P53886 1748 aa4.49□□□□□ -1.69
SDO1YLR022C ABZ1P37254 787 aaPredicted RBP4.49□□□□□ -1.69
SDO1YLR022C YFL054CP43549 646 aa4.49□□□□□ -1.69
SDO1YLR022C EEB1Q02891 456 aa4.49□□□□□ -1.69
SDO1YLR022C RSB1Q08417 382 aa4.49□□□□□ -1.69
SDO1YLR022C TRP2P00899 507 aaKnown RBP4.48□□□□□ -1.69
SDO1YLR022C RPS9BP05755 195 aaKnown RBP4.48□□□□□ -1.69
SDO1YLR022C LYP1P32487 611 aa4.48□□□□□ -1.69
SDO1YLR022C PAF1P38351 445 aa4.48□□□□□ -1.69
SDO1YLR022C CLU1Q03690 1277 aaKnown RBP4.48□□□□□ -1.69
SDO1YLR022C YDR132CQ03900 495 aa4.48□□□□□ -1.69
SDO1YLR022C SHM2P37291 469 aaKnown RBP4.47□□□□□ -1.69
SDO1YLR022C SPT20P50875 604 aa4.47□□□□□ -1.69
SDO1YLR022C NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
SDO1YLR022C TAF8Q03750 510 aa4.47□□□□□ -1.69
SDO1YLR022C ATG13Q06628 738 aa4.47□□□□□ -1.69
SDO1YLR022C BAS1P22035 811 aa4.46□□□□□ -1.7
SDO1YLR022C CTS1P29029 562 aa4.46□□□□□ -1.7
SDO1YLR022C MCM7P38132 845 aa4.46□□□□□ -1.7
SDO1YLR022C SGD1Q06132 899 aa4.46□□□□□ -1.7
SDO1YLR022C YOR352WQ08816 343 aa4.46□□□□□ -1.7
SDO1YLR022C RIB2Q12362 591 aaKnown RBP4.46□□□□□ -1.7
SDO1YLR022C YLR419WQ06698 1435 aaKnown RBP4.46□□□□□ -1.7
SDO1YLR022C VPS13Q07878 3144 aa4.45□□□□□ -1.7
SDO1YLR022C YLR358CO13565 187 aa4.45□□□□□ -1.7
SDO1YLR022C RPL11AP0C0W9 174 aaKnown RBP4.45□□□□□ -1.7
SDO1YLR022C ICL1P28240 557 aaPredicted RBP4.45□□□□□ -1.7
SDO1YLR022C RFC5P38251 354 aa4.45□□□□□ -1.7
SDO1YLR022C SHC1P39000 512 aa4.45□□□□□ -1.7
SDO1YLR022C TYW3P53177 273 aa4.45□□□□□ -1.7
SDO1YLR022C YGR053CP53234 283 aa4.45□□□□□ -1.7
SDO1YLR022C ADE16P54113 591 aaKnown RBP4.45□□□□□ -1.7
SDO1YLR022C SIZ1Q04195 904 aa4.45□□□□□ -1.7
SDO1YLR022C ACM1Q08981 209 aa4.45□□□□□ -1.7
SDO1YLR022C SVS1Q12254 260 aa4.45□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms