RNA–Protein interactions for RNA: YKL180W

RPL17A, Transcript of Ribosomal 60S subunit protein L17A, yeast

Gene RPL17A, Length 555 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL17A	YKL180W	UBX5	Q06682	500 aa		4.57	□□□□□ -1.68
RPL17A	YKL180W	RXT3	Q07458	294 aa		4.57	□□□□□ -1.68
RPL17A	YKL180W	HSP60	P19882	572 aa	Known RBP	4.56	□□□□□ -1.68
RPL17A	YKL180W	THI80	P35202	319 aa		4.56	□□□□□ -1.68
RPL17A	YKL180W	CCC2	P38995	1004 aa		4.56	□□□□□ -1.68
RPL17A	YKL180W	GYP7	P48365	746 aa		4.56	□□□□□ -1.68
RPL17A	YKL180W	GCV2	P49095	1034 aa		4.56	□□□□□ -1.68
RPL17A	YKL180W	UTP8	P53276	713 aa	Known RBP	4.56	□□□□□ -1.68
RPL17A	YKL180W	SFB2	P53953	876 aa		4.56	□□□□□ -1.68
RPL17A	YKL180W	GPB1	Q08886	897 aa		4.56	□□□□□ -1.68
RPL17A	YKL180W	HIR3	P47171	1648 aa		4.55	□□□□□ -1.68
RPL17A	YKL180W	SCT1	P32784	759 aa		4.55	□□□□□ -1.68
RPL17A	YKL180W	YBR284W	P38150	797 aa		4.55	□□□□□ -1.68
RPL17A	YKL180W	SIT1	P39980	628 aa		4.55	□□□□□ -1.68
RPL17A	YKL180W	YER158C	P40095	573 aa		4.55	□□□□□ -1.68
RPL17A	YKL180W	YGR012W	P53206	393 aa		4.55	□□□□□ -1.68
RPL17A	YKL180W	YDR132C	Q03900	495 aa		4.55	□□□□□ -1.68
RPL17A	YKL180W	CDC53	Q12018	815 aa	Known RBP	4.55	□□□□□ -1.68
RPL17A	YKL180W	YPR071W	Q12346	211 aa		4.55	□□□□□ -1.68
RPL17A	YKL180W	MYO2	P19524	1574 aa	Known RBP	4.55	□□□□□ -1.68
RPL17A	YKL180W	HBS1	P32769	611 aa	Known RBP	4.54	□□□□□ -1.68
RPL17A	YKL180W	POA1	P38218	177 aa		4.54	□□□□□ -1.68
RPL17A	YKL180W	NPP2	P39997	493 aa		4.54	□□□□□ -1.68
RPL17A	YKL180W	MND2	P40577	368 aa		4.54	□□□□□ -1.68
RPL17A	YKL180W	HUL4	P40985	892 aa		4.54	□□□□□ -1.68
RPL17A	YKL180W	HUL5	P53119	910 aa		4.54	□□□□□ -1.68
RPL17A	YKL180W	DUS4	Q06063	367 aa		4.54	□□□□□ -1.68
RPL17A	YKL180W	ACK1	Q07622	623 aa	Predicted RBP	4.54	□□□□□ -1.68
RPL17A	YKL180W	FLC1	Q08967	793 aa		4.54	□□□□□ -1.68
RPL17A	YKL180W	YLR358C	O13565	187 aa		4.53	□□□□□ -1.68
RPL17A	YKL180W	CIT1	P00890	479 aa		4.53	□□□□□ -1.68
RPL17A	YKL180W	NPP1	P25353	742 aa		4.53	□□□□□ -1.68
RPL17A	YKL180W	EMC1	P25574	760 aa		4.53	□□□□□ -1.68
RPL17A	YKL180W	CDC48	P25694	835 aa	Known RBP	4.53	□□□□□ -1.68
RPL17A	YKL180W	SRP101	P32916	621 aa		4.53	□□□□□ -1.68
RPL17A	YKL180W	YKR078W	P36158	585 aa	Known RBP	4.53	□□□□□ -1.68
RPL17A	YKL180W	TSL1	P38427	1098 aa	Known RBP	4.53	□□□□□ -1.68
RPL17A	YKL180W	PSP2	P50109	593 aa	Known RBP	4.53	□□□□□ -1.68
RPL17A	YKL180W	LCD1	Q04377	747 aa		4.53	□□□□□ -1.68
RPL17A	YKL180W	TPO1	Q07824	586 aa		4.53	□□□□□ -1.68
RPL17A	YKL180W	YOL098C	Q12496	1037 aa		4.53	□□□□□ -1.68
RPL17A	YKL180W	HBN1	Q96VH4	193 aa		4.53	□□□□□ -1.68
RPL17A	YKL180W	SSK2	P53599	1579 aa		4.53	□□□□□ -1.69
RPL17A	YKL180W	REV3	P14284	1504 aa		4.52	□□□□□ -1.69
RPL17A	YKL180W	HSF1	P10961	833 aa		4.52	□□□□□ -1.69
RPL17A	YKL180W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
RPL17A	YKL180W	CDC20	P26309	610 aa		4.52	□□□□□ -1.69
RPL17A	YKL180W	RPC82	P32349	654 aa		4.52	□□□□□ -1.69
RPL17A	YKL180W	SRP40	P32583	406 aa	Predicted RBP	4.52	□□□□□ -1.69
RPL17A	YKL180W	DOM34	P33309	386 aa		4.52	□□□□□ -1.69
RPL17A	YKL180W	CCM1	P48237	864 aa	Predicted RBP	4.52	□□□□□ -1.69
RPL17A	YKL180W	NSE3	Q05541	303 aa		4.52	□□□□□ -1.69
RPL17A	YKL180W	CDA1	Q06702	301 aa		4.52	□□□□□ -1.69
RPL17A	YKL180W	YDL124W	Q07551	312 aa	Known RBP	4.52	□□□□□ -1.69
RPL17A	YKL180W	YOR131C	Q12486	218 aa		4.52	□□□□□ -1.69
RPL17A	YKL180W	UFD4	P33202	1483 aa		4.51	□□□□□ -1.69
RPL17A	YKL180W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.51	□□□□□ -1.69	not detected
RPL17A	YKL180W	AFR1	P33304	620 aa		4.51	□□□□□ -1.69
RPL17A	YKL180W	REC104	P33323	182 aa		4.51	□□□□□ -1.69
RPL17A	YKL180W	ERT1	P38140	529 aa		4.51	□□□□□ -1.69
RPL17A	YKL180W	YAP6	Q03935	383 aa		4.51	□□□□□ -1.69
RPL17A	YKL180W	BDF2	Q07442	638 aa		4.51	□□□□□ -1.69
RPL17A	YKL180W	ESC8	Q08119	714 aa		4.51	□□□□□ -1.69
RPL17A	YKL180W	HMI1	Q12039	706 aa		4.51	□□□□□ -1.69
RPL17A	YKL180W	TAF2	P23255	1407 aa		4.5	□□□□□ -1.69
RPL17A	YKL180W	RPP2A	P05319	106 aa	Known RBP	4.5	□□□□□ -1.69
RPL17A	YKL180W	NOT3	P06102	836 aa	Known RBP	4.5	□□□□□ -1.69
RPL17A	YKL180W	CDC6	P09119	513 aa		4.5	□□□□□ -1.69
RPL17A	YKL180W	MSD1	P15179	658 aa	Known RBP	4.5	□□□□□ -1.69
RPL17A	YKL180W	YHR020W	P38708	688 aa	Known RBP	4.5	□□□□□ -1.69
RPL17A	YKL180W	RSP5	P39940	809 aa	Known RBP	4.5	□□□□□ -1.69
RPL17A	YKL180W	TOK1	P40310	691 aa		4.5	□□□□□ -1.69
RPL17A	YKL180W	NOP2	P40991	618 aa	Known RBP	4.5	□□□□□ -1.69
RPL17A	YKL180W	IOC3	P43596	787 aa		4.5	□□□□□ -1.69
RPL17A	YKL180W	MET12	P46151	657 aa		4.5	□□□□□ -1.69
RPL17A	YKL180W	VPS62	P53285	467 aa		4.5	□□□□□ -1.69
RPL17A	YKL180W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.5	□□□□□ -1.69	not detected
RPL17A	YKL180W	VPS30	Q02948	557 aa		4.5	□□□□□ -1.69
RPL17A	YKL180W	HIS5	P07172	385 aa		4.49	□□□□□ -1.69
RPL17A	YKL180W	SPE1	P08432	466 aa		4.49	□□□□□ -1.69
RPL17A	YKL180W	RFA1	P22336	621 aa	Known RBP	4.49	□□□□□ -1.69
RPL17A	YKL180W	YKL091C	P33324	310 aa	Known RBP	4.49	□□□□□ -1.69
RPL17A	YKL180W	PET10	P36139	283 aa		4.49	□□□□□ -1.69
RPL17A	YKL180W	FLR1	P38124	548 aa		4.49	□□□□□ -1.69
RPL17A	YKL180W	OCA5	P38738	679 aa		4.49	□□□□□ -1.69
RPL17A	YKL180W	GGA2	P38817	585 aa	Known RBP	4.49	□□□□□ -1.69
RPL17A	YKL180W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.49	□□□□□ -1.69	not detected
RPL17A	YKL180W	RAI1	P53063	387 aa	Known RBP	4.49	□□□□□ -1.69
RPL17A	YKL180W	ADY3	Q07732	790 aa		4.49	□□□□□ -1.69
RPL17A	YKL180W	YTA7	P40340	1379 aa		4.49	□□□□□ -1.69
RPL17A	YKL180W	TOM70	P07213	617 aa	Known RBP	4.48	□□□□□ -1.69
RPL17A	YKL180W	TOP3	P13099	656 aa		4.48	□□□□□ -1.69
RPL17A	YKL180W	ATG19	P35193	415 aa		4.48	□□□□□ -1.69
RPL17A	YKL180W	YKL222C	P35995	705 aa		4.48	□□□□□ -1.69
RPL17A	YKL180W	YKE2	P52553	114 aa		4.48	□□□□□ -1.69
RPL17A	YKL180W	CLU1	Q03690	1277 aa	Known RBP	4.48	□□□□□ -1.69
RPL17A	YKL180W	TAF8	Q03750	510 aa		4.48	□□□□□ -1.69
RPL17A	YKL180W	YLR224W	Q05947	369 aa		4.48	□□□□□ -1.69
RPL17A	YKL180W	NOP12	Q08208	459 aa	Known RBP	4.48	□□□□□ -1.69
RPL17A	YKL180W	STU1	P38198	1513 aa		4.47	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms