RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W RRN11Q04712 507 aa5.08□□□□□ -1.6
ABF1YKL112W MRN1Q08925 612 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6 RIP-Chip
ABF1YKL112W MCM3P24279 971 aaKnown RBP5.08□□□□□ -1.6
ABF1YKL112W DPH2P32461 534 aa5.08□□□□□ -1.6
ABF1YKL112W PTR2P32901 601 aa5.08□□□□□ -1.6
ABF1YKL112W NTH2P35172 780 aa5.08□□□□□ -1.6
ABF1YKL112W YHR219WP38900 624 aa5.08□□□□□ -1.6
ABF1YKL112W ILV3P39522 585 aaKnown RBP5.08□□□□□ -1.6
ABF1YKL112W YNR014WP53719 212 aa5.08□□□□□ -1.6
ABF1YKL112W HAS1Q03532 505 aaKnown RBP5.08□□□□□ -1.6
ABF1YKL112W YOR131CQ12486 218 aa5.08□□□□□ -1.6
ABF1YKL112W YOL087CQ99247 1116 aa5.08□□□□□ -1.6
ABF1YKL112W FAB1P34756 2278 aa5.07□□□□□ -1.6
ABF1YKL112W ZUO1P32527 433 aaKnown RBP5.07□□□□□ -1.6
ABF1YKL112W TIF3P34167 436 aaKnown RBP5.07□□□□□ -1.6
ABF1YKL112W PXA2P34230 853 aa5.07□□□□□ -1.6
ABF1YKL112W NOP4P37838 685 aaKnown RBP5.07□□□□□ -1.6
ABF1YKL112W CTM1P38818 585 aa5.07□□□□□ -1.6
ABF1YKL112W YJL055WP47044 245 aa5.07□□□□□ -1.6
ABF1YKL112W CSN12P47130 423 aa5.07□□□□□ -1.6
ABF1YKL112W PXR1P53335 271 aaPredicted RBP5.07□□□□□ -1.6
ABF1YKL112W NNT1Q05874 261 aa5.07□□□□□ -1.6
ABF1YKL112W ESC8Q08119 714 aa5.07□□□□□ -1.6
ABF1YKL112W KAR2P16474 682 aaKnown RBP5.06□□□□□ -1.6
ABF1YKL112W ITR1P30605 584 aa5.06□□□□□ -1.6
ABF1YKL112W KRE6P32486 720 aa5.06□□□□□ -1.6
ABF1YKL112W SMY2P32909 740 aaKnown RBP5.06□□□□□ -1.6
ABF1YKL112W MNR2P35724 969 aa5.06□□□□□ -1.6
ABF1YKL112W YKL050CP35736 922 aa5.06□□□□□ -1.6
ABF1YKL112W ATG14P38270 344 aa5.06□□□□□ -1.6
ABF1YKL112W ERG7P38604 731 aa5.06□□□□□ -1.6
ABF1YKL112W YHR020WP38708 688 aaKnown RBP5.06□□□□□ -1.6
ABF1YKL112W CRP1P38845 465 aaKnown RBP5.06□□□□□ -1.6
ABF1YKL112W SIT1P39980 628 aa5.06□□□□□ -1.6
ABF1YKL112W YAP5P40574 245 aa5.06□□□□□ -1.6
ABF1YKL112W REF2P42073 533 aaPredicted RBP5.06□□□□□ -1.6
ABF1YKL112W AGX1P43567 385 aa5.06□□□□□ -1.6
ABF1YKL112W YJL171CP46992 396 aa5.06□□□□□ -1.6
ABF1YKL112W SDA1P53313 767 aaKnown RBP5.06□□□□□ -1.6
ABF1YKL112W ALD6P54115 500 aaKnown RBP5.06□□□□□ -1.6
ABF1YKL112W VPS30Q02948 557 aa5.06□□□□□ -1.6
ABF1YKL112W PRP42Q03776 544 aaKnown RBP5.06□□□□□ -1.6
ABF1YKL112W SND1Q04007 877 aa5.06□□□□□ -1.6
ABF1YKL112W YMR111CQ04461 462 aaPredicted RBP5.06□□□□□ -1.6
ABF1YKL112W ADE13Q05911 482 aaKnown RBP5.06□□□□□ -1.6
ABF1YKL112W YDR034W-BQ6Q5X2 51 aa5.06□□□□□ -1.6
ABF1YKL112W GFD2P25370 566 aaKnown RBP5.06□□□□□ -1.6
ABF1YKL112W HIR1P32479 840 aa5.06□□□□□ -1.6
ABF1YKL112W VMA8P32610 256 aaKnown RBP5.06□□□□□ -1.6
ABF1YKL112W TIF5P38431 405 aaKnown RBP5.06□□□□□ -1.6
ABF1YKL112W MGE1P38523 228 aa5.06□□□□□ -1.6
ABF1YKL112W ICP55P40051 511 aa5.06□□□□□ -1.6
ABF1YKL112W YJL070CP40361 888 aa5.06□□□□□ -1.6
ABF1YKL112W IAH1P41734 238 aa5.06□□□□□ -1.6
ABF1YKL112W SEC26P41810 973 aaKnown RBP5.06□□□□□ -1.6
ABF1YKL112W ADA2Q02336 434 aa5.06□□□□□ -1.6
ABF1YKL112W YPL034WQ03083 165 aa5.06□□□□□ -1.6
ABF1YKL112W YDR090CQ03193 310 aa5.06□□□□□ -1.6
ABF1YKL112W SLK19Q08581 821 aaKnown RBP5.06□□□□□ -1.6
ABF1YKL112W ECM29P38737 1868 aa5.06□□□□□ -1.6
ABF1YKL112W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.05□□□□□ -1.6not detected
ABF1YKL112W SRO9P25567 434 aaKnown RBP5.05□□□□□ -1.6
ABF1YKL112W MSH2P25847 964 aa5.05□□□□□ -1.6
ABF1YKL112W CLB5P30283 435 aa5.05□□□□□ -1.6
ABF1YKL112W MED8P38304 223 aa5.05□□□□□ -1.6
ABF1YKL112W SLX1P38324 304 aa5.05□□□□□ -1.6
ABF1YKL112W ERP5P38819 212 aa5.05□□□□□ -1.6
ABF1YKL112W ESL1P40456 1118 aa5.05□□□□□ -1.6
ABF1YKL112W MET18P40469 1032 aa5.05□□□□□ -1.6
ABF1YKL112W YIR042CP40586 236 aa5.05□□□□□ -1.6
ABF1YKL112W RET2P43621 546 aa5.05□□□□□ -1.6
ABF1YKL112W NET1P47035 1189 aa5.05□□□□□ -1.6
ABF1YKL112W ERB1Q04660 807 aaKnown RBP5.05□□□□□ -1.6
ABF1YKL112W PPM2Q08282 695 aa5.05□□□□□ -1.6
ABF1YKL112W LAP2Q10740 671 aa5.05□□□□□ -1.6
ABF1YKL112W CDC53Q12018 815 aaKnown RBP5.05□□□□□ -1.6
ABF1YKL112W SLP1Q12232 587 aa5.05□□□□□ -1.6
ABF1YKL112W YBL029C-AQ3E756 94 aa5.05□□□□□ -1.6
ABF1YKL112W MPD2Q99316 277 aa5.05□□□□□ -1.6
ABF1YKL112W TRP2P00899 507 aaKnown RBP5.05□□□□□ -1.6
ABF1YKL112W HEM1P09950 548 aaPredicted RBP5.05□□□□□ -1.6
ABF1YKL112W SUI2P20459 304 aaKnown RBP5.05□□□□□ -1.6
ABF1YKL112W RIB7P33312 244 aa5.05□□□□□ -1.6
ABF1YKL112W NUP120P35729 1037 aa5.05□□□□□ -1.6
ABF1YKL112W TEF4P36008 412 aaKnown RBP5.05□□□□□ -1.6
ABF1YKL112W MSC7P38694 644 aa5.05□□□□□ -1.6
ABF1YKL112W SEC5P89102 971 aa5.05□□□□□ -1.6
ABF1YKL112W SPC19Q03954 165 aa5.05□□□□□ -1.6
ABF1YKL112W TSR2Q06672 205 aaKnown RBP5.05□□□□□ -1.6
ABF1YKL112W ACK1Q07622 623 aaPredicted RBP5.05□□□□□ -1.6
ABF1YKL112W RTC5Q12108 567 aaKnown RBP5.05□□□□□ -1.6
ABF1YKL112W WRS1Q12109 432 aaKnown RBP5.05□□□□□ -1.6
ABF1YKL112W TY3A-GQ12173 290 aa5.05□□□□□ -1.6
ABF1YKL112W TY3A-IQ99219 290 aa5.05□□□□□ -1.6
ABF1YKL112W TUS1Q06412 1307 aa5.04□□□□□ -1.6
ABF1YKL112W ATP4P05626 244 aa5.04□□□□□ -1.6
ABF1YKL112W RPC40P07703 335 aaKnown RBP5.04□□□□□ -1.6
ABF1YKL112W SEN2P16658 377 aa5.04□□□□□ -1.6
ABF1YKL112W RAD16P31244 790 aa5.04□□□□□ -1.6
ABF1YKL112W SSH4P32343 579 aa5.04□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms