RNA–Protein interactions for RNA: YKL040C

NFU1, Transcript of Protein involved in iron metabolism in mitochondria, yeast

Gene NFU1, Length 771 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NFU1	YKL040C	YLR040C	Q07988	224 aa		4.65	□□□□□ -1.67
NFU1	YKL040C	NPP2	P39997	493 aa		4.64	□□□□□ -1.67
NFU1	YKL040C	YOL073C	Q08232	322 aa		4.64	□□□□□ -1.67
NFU1	YKL040C	MET10	P39692	1035 aa		4.63	□□□□□ -1.67
NFU1	YKL040C	YLR225C	Q05948	407 aa	Known RBP	4.63	□□□□□ -1.67
NFU1	YKL040C	PET112	P33893	541 aa		4.62	□□□□□ -1.67
NFU1	YKL040C	ATG19	P35193	415 aa		4.62	□□□□□ -1.67
NFU1	YKL040C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
NFU1	YKL040C	GUP2	Q08929	609 aa		4.62	□□□□□ -1.67
NFU1	YKL040C	SUL1	P38359	859 aa		4.61	□□□□□ -1.67
NFU1	YKL040C	SFB2	P53953	876 aa		4.61	□□□□□ -1.67
NFU1	YKL040C	ESC2	Q06340	456 aa		4.61	□□□□□ -1.67
NFU1	YKL040C	SAH1	P39954	449 aa	Known RBP	4.6	□□□□□ -1.67
NFU1	YKL040C	SPO20	Q04359	397 aa		4.6	□□□□□ -1.67
NFU1	YKL040C	TMN2	Q04562	672 aa		4.6	□□□□□ -1.67
NFU1	YKL040C	UPC2	Q12151	913 aa		4.6	□□□□□ -1.67
NFU1	YKL040C	CAD1	P24813	409 aa	Known RBP	4.59	□□□□□ -1.67
NFU1	YKL040C	KTR4	P38131	464 aa		4.59	□□□□□ -1.67
NFU1	YKL040C	OYE2	Q03558	400 aa	Known RBP	4.59	□□□□□ -1.67
NFU1	YKL040C	ERG4	P25340	473 aa		4.58	□□□□□ -1.68
NFU1	YKL040C	CDC12	P32468	407 aa	Known RBP	4.58	□□□□□ -1.68
NFU1	YKL040C	QRI1	P43123	477 aa	Known RBP	4.58	□□□□□ -1.68
NFU1	YKL040C	MCH5	Q08777	521 aa		4.58	□□□□□ -1.68
NFU1	YKL040C	HEM3	P28789	327 aa		4.57	□□□□□ -1.68
NFU1	YKL040C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
NFU1	YKL040C	STB4	P50104	949 aa		4.57	□□□□□ -1.68
NFU1	YKL040C	OMS1	Q06668	471 aa		4.57	□□□□□ -1.68
NFU1	YKL040C	TRP4	P07285	380 aa	Predicted RBP	4.56	□□□□□ -1.68
NFU1	YKL040C	RPC82	P32349	654 aa		4.56	□□□□□ -1.68
NFU1	YKL040C	STE14	P32584	239 aa		4.56	□□□□□ -1.68
NFU1	YKL040C	ABD1	P32783	436 aa	Predicted RBP	4.56	□□□□□ -1.68
NFU1	YKL040C	MNR2	P35724	969 aa		4.56	□□□□□ -1.68
NFU1	YKL040C	SNF7	P39929	240 aa	Known RBP	4.56	□□□□□ -1.68
NFU1	YKL040C	ATF1	P40353	525 aa		4.56	□□□□□ -1.68
NFU1	YKL040C	YGR053C	P53234	283 aa		4.56	□□□□□ -1.68
NFU1	YKL040C	YMR206W	Q03695	313 aa		4.56	□□□□□ -1.68
NFU1	YKL040C	STU2	P46675	888 aa		4.55	□□□□□ -1.68
NFU1	YKL040C	SLU7	Q02775	382 aa	Known RBP	4.55	□□□□□ -1.68
NFU1	YKL040C	SRP1	Q02821	542 aa	Known RBP	4.55	□□□□□ -1.68
NFU1	YKL040C	TRM13	Q12383	476 aa		4.55	□□□□□ -1.68
NFU1	YKL040C	MBP1	P39678	833 aa		4.54	□□□□□ -1.68
NFU1	YKL040C	FAA4	P47912	694 aa	Known RBP	4.54	□□□□□ -1.68
NFU1	YKL040C	RAI1	P53063	387 aa	Known RBP	4.54	□□□□□ -1.68
NFU1	YKL040C	MUK1	Q02866	612 aa		4.54	□□□□□ -1.68
NFU1	YKL040C	IRC10	Q08118	586 aa		4.54	□□□□□ -1.68
NFU1	YKL040C	ACF2	Q12168	779 aa		4.54	□□□□□ -1.68
NFU1	YKL040C	SED4	P25365	1065 aa		4.53	□□□□□ -1.68
NFU1	YKL040C	ASF1	P32447	279 aa		4.53	□□□□□ -1.68
NFU1	YKL040C	GYP7	P48365	746 aa		4.53	□□□□□ -1.68
NFU1	YKL040C	ERG5	P54781	538 aa		4.53	□□□□□ -1.68
NFU1	YKL040C	RNT1	Q02555	471 aa		4.53	□□□□□ -1.68
NFU1	YKL040C	YML020W	Q03722	664 aa		4.53	□□□□□ -1.68
NFU1	YKL040C	YER158C	P40095	573 aa		4.52	□□□□□ -1.69
NFU1	YKL040C	DUS3	Q06053	668 aa	Known RBP	4.52	□□□□□ -1.69
NFU1	YKL040C	YPR196W	Q06595	470 aa		4.52	□□□□□ -1.69
NFU1	YKL040C	NOP8	Q08287	484 aa	Predicted RBP	4.52	□□□□□ -1.69
NFU1	YKL040C	PPR1	P07272	904 aa	Predicted RBP	4.51	□□□□□ -1.69
NFU1	YKL040C	ALG7	P07286	448 aa		4.51	□□□□□ -1.69
NFU1	YKL040C	TSL1	P38427	1098 aa	Known RBP	4.51	□□□□□ -1.69
NFU1	YKL040C	TIM44	Q01852	431 aa		4.51	□□□□□ -1.69
NFU1	YKL040C	BDF2	Q07442	638 aa		4.51	□□□□□ -1.69
NFU1	YKL040C	SBA1	P28707	216 aa	Known RBP	4.5	□□□□□ -1.69
NFU1	YKL040C	MTH1	P35198	433 aa		4.5	□□□□□ -1.69
NFU1	YKL040C	YKR078W	P36158	585 aa	Known RBP	4.5	□□□□□ -1.69
NFU1	YKL040C	LGE1	Q02796	332 aa	Known RBP	4.5	□□□□□ -1.69
NFU1	YKL040C	GDE1	Q02979	1223 aa		4.5	□□□□□ -1.69
NFU1	YKL040C	CUE2	P36075	443 aa	Known RBP	4.49	□□□□□ -1.69
NFU1	YKL040C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.49	□□□□□ -1.69	not detected
NFU1	YKL040C	GND2	P53319	492 aa		4.49	□□□□□ -1.69
NFU1	YKL040C	SSL1	Q04673	461 aa	Predicted RBP	4.49	□□□□□ -1.69
NFU1	YKL040C	NOT3	P06102	836 aa	Known RBP	4.48	□□□□□ -1.69
NFU1	YKL040C	AGP1	P25376	633 aa		4.48	□□□□□ -1.69
NFU1	YKL040C	SEC21	P32074	935 aa	Known RBP	4.48	□□□□□ -1.69
NFU1	YKL040C	YBR238C	P38330	731 aa	Known RBP	4.48	□□□□□ -1.69
NFU1	YKL040C	YKE2	P52553	114 aa		4.48	□□□□□ -1.69
NFU1	YKL040C	NPP1	P25353	742 aa		4.47	□□□□□ -1.69
NFU1	YKL040C	CDC48	P25694	835 aa	Known RBP	4.47	□□□□□ -1.69
NFU1	YKL040C	SPC42	P36094	363 aa		4.47	□□□□□ -1.69
NFU1	YKL040C	FAL1	Q12099	399 aa	Known RBP	4.47	□□□□□ -1.69
NFU1	YKL040C	FBP1	P09201	348 aa		4.46	□□□□□ -1.7
NFU1	YKL040C	AFR1	P33304	620 aa		4.46	□□□□□ -1.7
NFU1	YKL040C	STE13	P33894	931 aa		4.46	□□□□□ -1.7
NFU1	YKL040C	PEX19	Q07418	342 aa		4.46	□□□□□ -1.7
NFU1	YKL040C	CTF13	P35203	478 aa		4.45	□□□□□ -1.7
NFU1	YKL040C	VBA5	P36172	582 aa		4.45	□□□□□ -1.7
NFU1	YKL040C	KRI1	P42846	591 aa	Known RBP	4.45	□□□□□ -1.7
NFU1	YKL040C	YDR306C	Q06640	478 aa		4.45	□□□□□ -1.7
NFU1	YKL040C	SDP1	P40479	209 aa		4.44	□□□□□ -1.7
NFU1	YKL040C	SDS3	P40505	327 aa		4.44	□□□□□ -1.7
NFU1	YKL040C	FRE5	Q08908	694 aa		4.44	□□□□□ -1.7
NFU1	YKL040C	TUB3	P09734	445 aa	Known RBP	4.43	□□□□□ -1.7
NFU1	YKL040C	PPH3	P32345	308 aa		4.43	□□□□□ -1.7
NFU1	YKL040C	RPD3	P32561	433 aa		4.43	□□□□□ -1.7
NFU1	YKL040C	PPS1	P38148	807 aa		4.43	□□□□□ -1.7
NFU1	YKL040C	SNM1	P40993	198 aa		4.43	□□□□□ -1.7
NFU1	YKL040C	HBT1	Q07653	1046 aa	Known RBP	4.43	□□□□□ -1.7
NFU1	YKL040C	CTF8	P38877	133 aa		4.42	□□□□□ -1.7
NFU1	YKL040C	VPS16	Q03308	798 aa		4.42	□□□□□ -1.7
NFU1	YKL040C	SHE9	Q04172	456 aa		4.42	□□□□□ -1.7
NFU1	YKL040C	TRM11	Q12463	433 aa		4.42	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 62.2 ms