RNA–Protein interactions for RNA: YGR100W

MDR1, Transcript of Cytoplasmic GTPase-activating protein, yeast

Gene MDR1, Length 2,853 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MDR1	YGR100W	SRT1	Q03175	343 aa		4.89	□□□□□ -1.63
MDR1	YGR100W	SPC24	Q04477	213 aa		4.89	□□□□□ -1.63
MDR1	YGR100W	TAF9	Q05027	157 aa		4.89	□□□□□ -1.63
MDR1	YGR100W	HMI1	Q12039	706 aa		4.89	□□□□□ -1.63
MDR1	YGR100W	DBP10	Q12389	995 aa	Known RBP	4.89	□□□□□ -1.63
MDR1	YGR100W	TY1B-JR2	P47100	1755 aa	Known RBP	4.88	□□□□□ -1.63
MDR1	YGR100W	TY1B-ER2	Q03619	1755 aa		4.88	□□□□□ -1.63
MDR1	YGR100W	TY1B-MR1	Q04214	1755 aa		4.88	□□□□□ -1.63
MDR1	YGR100W	TY1B-MR2	Q04670	1755 aa	Known RBP	4.88	□□□□□ -1.63
MDR1	YGR100W	TY1B-LR1	Q12088	1755 aa	Known RBP	4.88	□□□□□ -1.63
MDR1	YGR100W	TY1B-NL1	Q12112	1755 aa		4.88	□□□□□ -1.63
MDR1	YGR100W	TY1B-GR1	Q12141	1755 aa		4.88	□□□□□ -1.63
MDR1	YGR100W	TY1B-BL	Q12490	1755 aa		4.88	□□□□□ -1.63
MDR1	YGR100W	CDC8	P00572	216 aa		4.88	□□□□□ -1.63
MDR1	YGR100W	ENO1	P00924	437 aa	Known RBP	4.88	□□□□□ -1.63
MDR1	YGR100W	DPS1	P04802	557 aa	Known RBP	4.88	□□□□□ -1.63
MDR1	YGR100W	PDE2	P06776	526 aa		4.88	□□□□□ -1.63
MDR1	YGR100W	VMA2	P16140	517 aa	Known RBP	4.88	□□□□□ -1.63
MDR1	YGR100W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
MDR1	YGR100W	SSF1	P38789	453 aa	Predicted RBP	4.88	□□□□□ -1.63
MDR1	YGR100W	YFL066C	P43538	392 aa		4.88	□□□□□ -1.63
MDR1	YGR100W	FAR7	P43592	221 aa		4.88	□□□□□ -1.63
MDR1	YGR100W	ENP2	P48234	707 aa	Known RBP	4.88	□□□□□ -1.63
MDR1	YGR100W	BRO1	P48582	844 aa		4.88	□□□□□ -1.63
MDR1	YGR100W	GNP1	P48813	663 aa		4.88	□□□□□ -1.63
MDR1	YGR100W	VPS36	Q06696	566 aa		4.88	□□□□□ -1.63
MDR1	YGR100W	NSE1	Q07913	336 aa		4.88	□□□□□ -1.63
MDR1	YGR100W	RIM20	Q12033	661 aa		4.88	□□□□□ -1.63
MDR1	YGR100W	ELG1	Q12050	791 aa		4.88	□□□□□ -1.63
MDR1	YGR100W	RIO1	Q12196	484 aa	Known RBP	4.88	□□□□□ -1.63
MDR1	YGR100W	YSP2	Q06681	1438 aa		4.88	□□□□□ -1.63
MDR1	YGR100W	MPH3	P0CE00	602 aa		4.88	□□□□□ -1.63
MDR1	YGR100W	MSM1	P22438	575 aa		4.88	□□□□□ -1.63
MDR1	YGR100W	TPS2	P31688	896 aa	Known RBP	4.88	□□□□□ -1.63
MDR1	YGR100W	PYC2	P32327	1180 aa	Known RBP	4.88	□□□□□ -1.63
MDR1	YGR100W	PTR2	P32901	601 aa		4.88	□□□□□ -1.63
MDR1	YGR100W	OCA5	P38738	679 aa		4.88	□□□□□ -1.63
MDR1	YGR100W	YJR008W	P47085	338 aa		4.88	□□□□□ -1.63
MDR1	YGR100W	PRP43	P53131	767 aa	Known RBP	4.88	□□□□□ -1.63
MDR1	YGR100W	TMA64	Q04600	565 aa	Known RBP	4.88	□□□□□ -1.63
MDR1	YGR100W	NNT1	Q05874	261 aa		4.88	□□□□□ -1.63
MDR1	YGR100W	NOP6	Q07623	225 aa	Known RBP	4.88	□□□□□ -1.63
MDR1	YGR100W	MSH5	Q12175	901 aa		4.88	□□□□□ -1.63
MDR1	YGR100W	BUG1	Q12191	341 aa		4.88	□□□□□ -1.63
MDR1	YGR100W	MCM4	P30665	933 aa	Known RBP	4.87	□□□□□ -1.63
MDR1	YGR100W	DYS1	P38791	387 aa		4.87	□□□□□ -1.63
MDR1	YGR100W	TMN3	P40071	706 aa		4.87	□□□□□ -1.63
MDR1	YGR100W	STB2	P46679	850 aa		4.87	□□□□□ -1.63
MDR1	YGR100W	UBA2	P52488	636 aa		4.87	□□□□□ -1.63
MDR1	YGR100W	RAT1	Q02792	1006 aa	Known RBP	4.87	□□□□□ -1.63
MDR1	YGR100W	HEM1	P09950	548 aa	Predicted RBP	4.87	□□□□□ -1.63
MDR1	YGR100W	MAK16	P10962	306 aa	Predicted RBP	4.87	□□□□□ -1.63
MDR1	YGR100W	MVD1	P32377	396 aa	Known RBP	4.87	□□□□□ -1.63
MDR1	YGR100W	HXT3	P32466	567 aa	Known RBP	4.87	□□□□□ -1.63
MDR1	YGR100W	UBC6	P33296	250 aa	Predicted RBP	4.87	□□□□□ -1.63
MDR1	YGR100W	CNS1	P33313	385 aa		4.87	□□□□□ -1.63
MDR1	YGR100W	TIF4631	P39935	952 aa	Known RBP	4.87	□□□□□ -1.63
MDR1	YGR100W	ATP22	P50273	684 aa	Predicted RBP	4.87	□□□□□ -1.63
MDR1	YGR100W	ULP1	Q02724	621 aa		4.87	□□□□□ -1.63
MDR1	YGR100W	RPN8	Q08723	338 aa	Known RBP	4.87	□□□□□ -1.63
MDR1	YGR100W	MLS1	P30952	554 aa		4.86	□□□□□ -1.63
MDR1	YGR100W	SSE1	P32589	693 aa	Known RBP	4.86	□□□□□ -1.63
MDR1	YGR100W	SHM1	P37292	490 aa	Predicted RBP	4.86	□□□□□ -1.63
MDR1	YGR100W	PEX18	P38855	283 aa		4.86	□□□□□ -1.63
MDR1	YGR100W	CCT2	P39076	527 aa	Known RBP	4.86	□□□□□ -1.63
MDR1	YGR100W	RGA1	P39083	1007 aa		4.86	□□□□□ -1.63
MDR1	YGR100W	RIC1	P40395	1056 aa		4.86	□□□□□ -1.63
MDR1	YGR100W	PSP2	P50109	593 aa	Known RBP	4.86	□□□□□ -1.63
MDR1	YGR100W	LSC1	P53598	329 aa	Known RBP	4.86	□□□□□ -1.63
MDR1	YGR100W	PNG1	Q02890	363 aa		4.86	□□□□□ -1.63
MDR1	YGR100W	FDC1	Q03034	503 aa		4.86	□□□□□ -1.63
MDR1	YGR100W	VPS64	Q03944	604 aa		4.86	□□□□□ -1.63
MDR1	YGR100W	ATG17	Q06410	417 aa		4.86	□□□□□ -1.63
MDR1	YGR100W	YPL150W	Q12152	901 aa		4.86	□□□□□ -1.63
MDR1	YGR100W	NOT5	Q12514	560 aa	Predicted RBP	4.86	□□□□□ -1.63
MDR1	YGR100W	DNF3	Q12674	1656 aa		4.86	□□□□□ -1.63
MDR1	YGR100W	YPR089W	O13585	888 aa		4.86	□□□□□ -1.63
MDR1	YGR100W	LEU2	P04173	364 aa	Predicted RBP	4.86	□□□□□ -1.63
MDR1	YGR100W	BAS1	P22035	811 aa		4.86	□□□□□ -1.63
MDR1	YGR100W	RPC34	P32910	317 aa		4.86	□□□□□ -1.63
MDR1	YGR100W	OAF3	P36023	863 aa		4.86	□□□□□ -1.63
MDR1	YGR100W	DBP7	P36120	742 aa	Known RBP	4.86	□□□□□ -1.63
MDR1	YGR100W	FES1	P38260	290 aa		4.86	□□□□□ -1.63
MDR1	YGR100W	OAF1	P39720	1047 aa	Predicted RBP	4.86	□□□□□ -1.63
MDR1	YGR100W	MRM2	P53123	320 aa		4.86	□□□□□ -1.63
MDR1	YGR100W	CIK1	Q01649	594 aa		4.86	□□□□□ -1.63
MDR1	YGR100W	OPY2	Q06810	360 aa		4.86	□□□□□ -1.63
MDR1	YGR100W	NOB1	Q08444	459 aa	Known RBP	4.86	□□□□□ -1.63
MDR1	YGR100W	AFT2	Q08957	416 aa		4.86	□□□□□ -1.63
MDR1	YGR100W	PGA3	Q12746	312 aa	Known RBP	4.86	□□□□□ -1.63
MDR1	YGR100W	SEM1	O94742	89 aa		4.86	□□□□□ -1.63
MDR1	YGR100W	RPL24A	P04449	155 aa	Known RBP	4.86	□□□□□ -1.63
MDR1	YGR100W	YML002W	P0CF17	737 aa		4.86	□□□□□ -1.63
MDR1	YGR100W	RPS6A	P0CX37	236 aa	Known RBP	4.86	□□□□□ -1.63
MDR1	YGR100W	RPS6B	P0CX38	236 aa	Predicted RBP	4.86	□□□□□ -1.63
MDR1	YGR100W	MTF2	P10849	440 aa		4.86	□□□□□ -1.63
MDR1	YGR100W	TEC1	P18412	486 aa		4.86	□□□□□ -1.63
MDR1	YGR100W	CKI1	P20485	582 aa		4.86	□□□□□ -1.63
MDR1	YGR100W	DPB2	P24482	689 aa	Predicted RBP	4.86	□□□□□ -1.63
MDR1	YGR100W	KIP1	P28742	1111 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms