RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C ADY3Q07732 790 aa3.62□□□□□ -1.83
XRN1YGL173C INP54Q08227 384 aaKnown RBP3.62□□□□□ -1.83
XRN1YGL173C SOG2Q08817 791 aa3.62□□□□□ -1.83
XRN1YGL173C SKS1Q12505 502 aa3.62□□□□□ -1.83
XRN1YGL173C MSM1P22438 575 aa3.62□□□□□ -1.83
XRN1YGL173C PCL2P25693 308 aa3.62□□□□□ -1.83
XRN1YGL173C PUP2P32379 260 aa3.62□□□□□ -1.83
XRN1YGL173C BET3P36149 193 aa3.62□□□□□ -1.83
XRN1YGL173C EXO5P38289 585 aa3.62□□□□□ -1.83
XRN1YGL173C GTT3P39996 337 aa3.62□□□□□ -1.83
XRN1YGL173C SEC26P41810 973 aaKnown RBP3.62□□□□□ -1.83
XRN1YGL173C LCD1Q04377 747 aa3.62□□□□□ -1.83
XRN1YGL173C DAL4Q04895 635 aa3.62□□□□□ -1.83
XRN1YGL173C SSN3P39073 555 aa3.61□□□□□ -1.83
XRN1YGL173C MTO1P53070 669 aa3.61□□□□□ -1.83
XRN1YGL173C HLR1Q04429 423 aa3.61□□□□□ -1.83
XRN1YGL173C YLR257WQ06146 321 aaKnown RBP3.61□□□□□ -1.83
XRN1YGL173C VIP1Q06685 1146 aaKnown RBP3.61□□□□□ -1.83
XRN1YGL173C NEW1Q08972 1196 aaKnown RBP3.61□□□□□ -1.83
XRN1YGL173C REC8Q12188 680 aa3.61□□□□□ -1.83
XRN1YGL173C GAL1P04385 528 aa3.61□□□□□ -1.83
XRN1YGL173C SCP160P06105 1222 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83 RIP-Chip
XRN1YGL173C SPS1P08458 490 aa3.61□□□□□ -1.83
XRN1YGL173C ACO1P19414 778 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
XRN1YGL173C HIR1P32479 840 aa3.61□□□□□ -1.83
XRN1YGL173C GID8P40208 455 aa3.61□□□□□ -1.83
XRN1YGL173C RRT14P40470 206 aa3.61□□□□□ -1.83
XRN1YGL173C TIM50Q02776 476 aa3.61□□□□□ -1.83
XRN1YGL173C TFB2Q02939 513 aa3.61□□□□□ -1.83
XRN1YGL173C YDL124WQ07551 312 aaKnown RBP3.61□□□□□ -1.83
XRN1YGL173C ISF1P32488 338 aa3.61□□□□□ -1.83
XRN1YGL173C MKK2P32491 506 aa3.61□□□□□ -1.83
XRN1YGL173C BAP2P38084 609 aa3.61□□□□□ -1.83
XRN1YGL173C DJP1P40564 432 aa3.61□□□□□ -1.83
XRN1YGL173C YGR125WP53273 1036 aa3.61□□□□□ -1.83
XRN1YGL173C SAC6P32599 642 aaKnown RBP3.61□□□□□ -1.83
XRN1YGL173C MRS6P32864 603 aaKnown RBP3.61□□□□□ -1.83
XRN1YGL173C SPC29P33419 253 aa3.61□□□□□ -1.83
XRN1YGL173C EMC3P36039 253 aa3.61□□□□□ -1.83
XRN1YGL173C MIC60P36112 540 aa3.61□□□□□ -1.83
XRN1YGL173C YHL041WP38730 149 aa3.61□□□□□ -1.83
XRN1YGL173C CCM1P48237 864 aaPredicted RBP3.61□□□□□ -1.83
XRN1YGL173C IMA1P53051 589 aa3.61□□□□□ -1.83
XRN1YGL173C APP1P53933 587 aa3.61□□□□□ -1.83
XRN1YGL173C SYH1Q02875 849 aaKnown RBP3.61□□□□□ -1.83
XRN1YGL173C SRC1Q03707 834 aa3.61□□□□□ -1.83
XRN1YGL173C YMR074CQ04773 145 aa3.61□□□□□ -1.83
XRN1YGL173C HEM13P11353 328 aaKnown RBP3.6□□□□□ -1.83
XRN1YGL173C MRF1P30775 413 aaPredicted RBP3.6□□□□□ -1.83
XRN1YGL173C PLC1P32383 869 aa3.6□□□□□ -1.83
XRN1YGL173C SAS3P34218 831 aa3.6□□□□□ -1.83
XRN1YGL173C UGA2P38067 497 aa3.6□□□□□ -1.83
XRN1YGL173C TAF5P38129 798 aa3.6□□□□□ -1.83
XRN1YGL173C TIF11P38912 153 aaKnown RBP3.6□□□□□ -1.83
XRN1YGL173C RPN11P43588 306 aaKnown RBP3.6□□□□□ -1.83
XRN1YGL173C RET2P43621 546 aa3.6□□□□□ -1.83
XRN1YGL173C HXT16P47185 567 aa3.6□□□□□ -1.83
XRN1YGL173C SKY1Q03656 742 aa3.6□□□□□ -1.83
XRN1YGL173C ERF2Q06551 359 aa3.6□□□□□ -1.83
XRN1YGL173C HBN1Q96VH4 193 aa3.6□□□□□ -1.83
XRN1YGL173C NIC96P34077 839 aa3.6□□□□□ -1.83
XRN1YGL173C RRF1P38771 230 aa3.6□□□□□ -1.83
XRN1YGL173C LOC1P43586 204 aaPredicted RBP3.6□□□□□ -1.83
XRN1YGL173C VPS53P47061 822 aa3.6□□□□□ -1.83
XRN1YGL173C SRD1P09007 221 aa3.6□□□□□ -1.83
XRN1YGL173C FUS1P11710 512 aa3.6□□□□□ -1.83
XRN1YGL173C CDC12P32468 407 aaKnown RBP3.6□□□□□ -1.83
XRN1YGL173C YKL069WP36088 180 aa3.6□□□□□ -1.83
XRN1YGL173C SEA4P38164 1038 aa3.6□□□□□ -1.83
XRN1YGL173C LRP1P38801 184 aaKnown RBP3.6□□□□□ -1.83
XRN1YGL173C CIA1Q05583 330 aa3.6□□□□□ -1.83
XRN1YGL173C SPN1Q06505 410 aaPredicted RBP3.6□□□□□ -1.83
XRN1YGL173C FAL1Q12099 399 aaKnown RBP3.6□□□□□ -1.83
XRN1YGL173C FOB1O13329 566 aa3.6□□□□□ -1.83
XRN1YGL173C VMA2P16140 517 aaKnown RBP3.6□□□□□ -1.83
XRN1YGL173C POL4P25615 582 aa3.6□□□□□ -1.83
XRN1YGL173C BIO5P53744 561 aaKnown RBP3.6□□□□□ -1.83
XRN1YGL173C SNU66Q12420 587 aaPredicted RBP3.6□□□□□ -1.83
XRN1YGL173C PYC2P32327 1180 aaKnown RBP3.59□□□□□ -1.83
XRN1YGL173C AIM46P38885 310 aa3.59□□□□□ -1.83
XRN1YGL173C PNT1P38969 423 aa3.59□□□□□ -1.83
XRN1YGL173C EMG1Q06287 252 aaKnown RBP3.59□□□□□ -1.83
XRN1YGL173C EAF1Q06337 982 aa3.59□□□□□ -1.83
XRN1YGL173C NUP120P35729 1037 aa3.59□□□□□ -1.83
XRN1YGL173C APL2P36000 726 aaPredicted RBP3.59□□□□□ -1.83
XRN1YGL173C CAB3P36076 571 aa3.59□□□□□ -1.83
XRN1YGL173C UIP5P36137 443 aa3.59□□□□□ -1.83
XRN1YGL173C YHL008CP38750 627 aa3.59□□□□□ -1.83
XRN1YGL173C BCD1P38772 366 aa3.59□□□□□ -1.83
XRN1YGL173C PEX28P38848 579 aa3.59□□□□□ -1.83
XRN1YGL173C MPP10P47083 593 aaKnown RBP3.59□□□□□ -1.83
XRN1YGL173C PEX14P53112 341 aa3.59□□□□□ -1.83
XRN1YGL173C FKS3Q04952 1785 aa3.59□□□□□ -1.83
XRN1YGL173C RER1P25560 188 aa3.59□□□□□ -1.84
XRN1YGL173C HOG1P32485 435 aa3.59□□□□□ -1.84
XRN1YGL173C NCL1P38205 684 aaKnown RBP3.59□□□□□ -1.84
XRN1YGL173C PAC1P39946 494 aaKnown RBP3.59□□□□□ -1.84
XRN1YGL173C MSB3P48566 633 aaPredicted RBP3.59□□□□□ -1.84
XRN1YGL173C YGR283CP53336 341 aaPredicted RBP3.59□□□□□ -1.84
XRN1YGL173C YLL054CQ12244 843 aa3.59□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 58.4 ms