RNA–Protein interactions for RNA: YGL098W

USE1, Transcript of Essential SNARE protein localized to the ER, yeastyeast

Gene USE1, Length 738 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USE1YGL098W VPH2P32341 215 aa3.51□□□□□ -1.85
USE1YGL098W CBF2P32504 956 aa3.51□□□□□ -1.85
USE1YGL098W RIB7P33312 244 aa3.51□□□□□ -1.85
USE1YGL098W STO1P34160 861 aaKnown RBP3.51□□□□□ -1.85
USE1YGL098W KDX1P36005 433 aa3.51□□□□□ -1.85
USE1YGL098W YKT6P36015 200 aaKnown RBP3.51□□□□□ -1.85
USE1YGL098W YLF2P38746 405 aa3.51□□□□□ -1.85
USE1YGL098W MET18P40469 1032 aa3.51□□□□□ -1.85
USE1YGL098W STB1P42845 420 aa3.51□□□□□ -1.85
USE1YGL098W LAM5P43560 674 aa3.51□□□□□ -1.85
USE1YGL098W ERP6P53198 216 aa3.51□□□□□ -1.85
USE1YGL098W COP1P53622 1201 aaKnown RBP3.51□□□□□ -1.85
USE1YGL098W RCM1P53972 490 aa3.51□□□□□ -1.85
USE1YGL098W CIK1Q01649 594 aa3.51□□□□□ -1.85
USE1YGL098W YKR005CQ02203 525 aa3.51□□□□□ -1.85
USE1YGL098W ADA2Q02336 434 aa3.51□□□□□ -1.85
USE1YGL098W GIR2Q03768 265 aaPredicted RBP3.51□□□□□ -1.85
USE1YGL098W FUS2Q05670 677 aa3.51□□□□□ -1.85
USE1YGL098W YLR257WQ06146 321 aaKnown RBP3.51□□□□□ -1.85
USE1YGL098W NOP6Q07623 225 aaKnown RBP3.51□□□□□ -1.85
USE1YGL098W PSR1Q07800 427 aa3.51□□□□□ -1.85
USE1YGL098W VIK1Q12045 647 aa3.51□□□□□ -1.85
USE1YGL098W APC2Q12440 853 aa3.51□□□□□ -1.85
USE1YGL098W YOL098CQ12496 1037 aa3.51□□□□□ -1.85
USE1YGL098W ADE6P38972 1358 aaKnown RBP3.51□□□□□ -1.85
USE1YGL098W REP1P03871 373 aa3.5□□□□□ -1.85
USE1YGL098W CPA2P03965 1118 aaKnown RBP3.5□□□□□ -1.85
USE1YGL098W TIF1P10081 395 aaKnown RBP3.5□□□□□ -1.85
USE1YGL098W IME1P21190 360 aa3.5□□□□□ -1.85
USE1YGL098W RDS1P25611 832 aa3.5□□□□□ -1.85
USE1YGL098W ITR2P30606 609 aa3.5□□□□□ -1.85
USE1YGL098W SRB4P32569 687 aa3.5□□□□□ -1.85
USE1YGL098W YKL091CP33324 310 aaKnown RBP3.5□□□□□ -1.85
USE1YGL098W VPS35P34110 944 aa3.5□□□□□ -1.85
USE1YGL098W OMA1P36163 345 aa3.5□□□□□ -1.85
USE1YGL098W SPO22P40511 975 aa3.5□□□□□ -1.85
USE1YGL098W GYP7P48365 746 aa3.5□□□□□ -1.85
USE1YGL098W BRO1P48582 844 aa3.5□□□□□ -1.85
USE1YGL098W CTF18P49956 741 aa3.5□□□□□ -1.85
USE1YGL098W FMS1P50264 508 aa3.5□□□□□ -1.85
USE1YGL098W HOS2P53096 452 aaPredicted RBP3.5□□□□□ -1.85
USE1YGL098W FAR11P53917 953 aa3.5□□□□□ -1.85
USE1YGL098W YMR265CQ03508 461 aaKnown RBP3.5□□□□□ -1.85
USE1YGL098W CEF1Q03654 590 aaPredicted RBP3.5□□□□□ -1.85
USE1YGL098W TAF8Q03750 510 aa3.5□□□□□ -1.85
USE1YGL098W CWC15Q03772 175 aaKnown RBP3.5□□□□□ -1.85
USE1YGL098W TRS120Q04183 1289 aa3.5□□□□□ -1.85
USE1YGL098W HFD1Q04458 532 aa3.5□□□□□ -1.85
USE1YGL098W VAC14Q06708 880 aa3.5□□□□□ -1.85
USE1YGL098W GPN2Q08726 347 aaPredicted RBP3.5□□□□□ -1.85
USE1YGL098W CTI6Q08923 506 aa3.5□□□□□ -1.85
USE1YGL098W ELG1Q12050 791 aa3.5□□□□□ -1.85
USE1YGL098W GNT1Q12096 491 aa3.5□□□□□ -1.85
USE1YGL098W CLF1Q12309 687 aaPredicted RBP3.5□□□□□ -1.85
USE1YGL098W YOR093CQ12275 1648 aa3.49□□□□□ -1.85
USE1YGL098W YPR089WO13585 888 aa3.49□□□□□ -1.85
USE1YGL098W PET494P07390 489 aaPredicted RBP3.49□□□□□ -1.85
USE1YGL098W SSC1P0CS90 654 aaKnown RBP3.49□□□□□ -1.85
USE1YGL098W ADH4P10127 382 aa3.49□□□□□ -1.85
USE1YGL098W SUP45P12385 437 aaKnown RBP3.49□□□□□ -1.85
USE1YGL098W SEC23P15303 768 aaKnown RBP3.49□□□□□ -1.85
USE1YGL098W PHO13P19881 312 aa3.49□□□□□ -1.85
USE1YGL098W ADE2P21264 571 aaKnown RBP3.49□□□□□ -1.85
USE1YGL098W SEC15P22224 910 aa3.49□□□□□ -1.85
USE1YGL098W MBR1P23493 339 aa3.49□□□□□ -1.85
USE1YGL098W VAN1P23642 535 aa3.49□□□□□ -1.85
USE1YGL098W SEC8P32855 1065 aa3.49□□□□□ -1.85
USE1YGL098W SSO1P32867 290 aa3.49□□□□□ -1.85
USE1YGL098W SMC1P32908 1225 aa3.49□□□□□ -1.85
USE1YGL098W DUR3P33413 735 aa3.49□□□□□ -1.85
USE1YGL098W COY1P34237 679 aa3.49□□□□□ -1.85
USE1YGL098W DBP7P36120 742 aaKnown RBP3.49□□□□□ -1.85
USE1YGL098W YRO2P38079 344 aa3.49□□□□□ -1.85
USE1YGL098W TBS1P38114 1094 aa3.49□□□□□ -1.85
USE1YGL098W HEK2P38199 381 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
USE1YGL098W FZO1P38297 855 aa3.49□□□□□ -1.85
USE1YGL098W YBR242WP38331 238 aa3.49□□□□□ -1.85
USE1YGL098W GGA2P38817 585 aaKnown RBP3.49□□□□□ -1.85
USE1YGL098W HAL5P38970 855 aaKnown RBP3.49□□□□□ -1.85
USE1YGL098W SAK1P38990 1142 aa3.49□□□□□ -1.85
USE1YGL098W SCS2P40075 244 aaKnown RBP3.49□□□□□ -1.85
USE1YGL098W FYV10P40492 516 aa3.49□□□□□ -1.85
USE1YGL098W KTR7P40504 517 aa3.49□□□□□ -1.85
USE1YGL098W NOP9P47077 666 aaKnown RBP3.49□□□□□ -1.85
USE1YGL098W HGH1P48362 394 aaKnown RBP3.49□□□□□ -1.85
USE1YGL098W HFM1P51979 1187 aa3.49□□□□□ -1.85
USE1YGL098W UTP22P53254 1237 aaPredicted RBP3.49□□□□□ -1.85
USE1YGL098W ZPR1P53303 486 aaKnown RBP3.49□□□□□ -1.85
USE1YGL098W SQS1P53866 767 aaKnown RBP3.49□□□□□ -1.85
USE1YGL098W YPL109CQ02981 657 aa3.49□□□□□ -1.85
USE1YGL098W HEH2Q03281 663 aa3.49□□□□□ -1.85
USE1YGL098W RMD1Q03441 430 aa3.49□□□□□ -1.85
USE1YGL098W CSI1Q04368 295 aa3.49□□□□□ -1.85
USE1YGL098W TAP42Q04372 366 aa3.49□□□□□ -1.85
USE1YGL098W HCR1Q05775 265 aaKnown RBP3.49□□□□□ -1.85
USE1YGL098W YLR177WQ06251 628 aa3.49□□□□□ -1.85
USE1YGL098W YLH47Q06493 454 aa3.49□□□□□ -1.85
USE1YGL098W NOP12Q08208 459 aaKnown RBP3.49□□□□□ -1.85
USE1YGL098W DNL4Q08387 944 aaPredicted RBP3.49□□□□□ -1.85
USE1YGL098W TAF10Q12030 206 aa3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 51.9 ms