RNA–Protein interactions for RNA: YGL056C

SDS23, Transcript of Protein involved in cell separation during budding, yeast

Gene SDS23, Length 1,584 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDS23	YGL056C	TY4A-J	P47023	414 aa		4.65	□□□□□ -1.67
SDS23	YGL056C	MTQ2	Q03920	221 aa	Predicted RBP	4.65	□□□□□ -1.67
SDS23	YGL056C	LCD1	Q04377	747 aa		4.65	□□□□□ -1.67
SDS23	YGL056C	RSA3	Q05942	220 aa	Known RBP	4.65	□□□□□ -1.67
SDS23	YGL056C	YPL260W	Q08977	551 aa		4.65	□□□□□ -1.67
SDS23	YGL056C	SPO21	Q12411	609 aa		4.65	□□□□□ -1.67
SDS23	YGL056C	KAR1	P11927	433 aa		4.64	□□□□□ -1.67
SDS23	YGL056C	RET1	P22276	1149 aa	Known RBP	4.64	□□□□□ -1.67
SDS23	YGL056C	NPP1	P25353	742 aa		4.64	□□□□□ -1.67
SDS23	YGL056C	PWP2	P25635	923 aa	Known RBP	4.64	□□□□□ -1.67
SDS23	YGL056C	KIP1	P28742	1111 aa		4.64	□□□□□ -1.67
SDS23	YGL056C	TOS1	P38288	455 aa		4.64	□□□□□ -1.67
SDS23	YGL056C	AVO1	Q08236	1176 aa		4.64	□□□□□ -1.67
SDS23	YGL056C	ELG1	Q12050	791 aa		4.64	□□□□□ -1.67
SDS23	YGL056C	ADE8	P04161	214 aa		4.63	□□□□□ -1.67
SDS23	YGL056C	YKL151C	P36059	337 aa		4.63	□□□□□ -1.67
SDS23	YGL056C	GPB2	P39717	880 aa		4.63	□□□□□ -1.67
SDS23	YGL056C	DAS1	P47005	663 aa		4.63	□□□□□ -1.67
SDS23	YGL056C	PEX14	P53112	341 aa		4.63	□□□□□ -1.67
SDS23	YGL056C	ELA1	P53861	379 aa	Predicted RBP	4.63	□□□□□ -1.67
SDS23	YGL056C	YNL034W	P53963	612 aa		4.63	□□□□□ -1.67
SDS23	YGL056C	YNL018C	P53976	612 aa		4.63	□□□□□ -1.67
SDS23	YGL056C	ECM16	Q04217	1267 aa	Known RBP	4.63	□□□□□ -1.67
SDS23	YGL056C	HFD1	Q04458	532 aa		4.63	□□□□□ -1.67
SDS23	YGL056C	YMR074C	Q04773	145 aa		4.63	□□□□□ -1.67
SDS23	YGL056C	HRQ1	Q05549	1077 aa		4.63	□□□□□ -1.67
SDS23	YGL056C	BRE4	Q07660	1125 aa		4.63	□□□□□ -1.67
SDS23	YGL056C	THS1	P04801	734 aa	Known RBP	4.62	□□□□□ -1.67
SDS23	YGL056C	ATP4	P05626	244 aa		4.62	□□□□□ -1.67
SDS23	YGL056C	PIF1	P07271	859 aa		4.62	□□□□□ -1.67
SDS23	YGL056C	SFL1	P20134	766 aa		4.62	□□□□□ -1.67
SDS23	YGL056C	PLC1	P32383	869 aa		4.62	□□□□□ -1.67
SDS23	YGL056C	HIR1	P32479	840 aa		4.62	□□□□□ -1.67
SDS23	YGL056C	SCT1	P32784	759 aa		4.62	□□□□□ -1.67
SDS23	YGL056C	YEL1	P34225	687 aa		4.62	□□□□□ -1.67
SDS23	YGL056C	MTC2	P34246	357 aa		4.62	□□□□□ -1.67
SDS23	YGL056C	HSE1	P38753	452 aa		4.62	□□□□□ -1.67
SDS23	YGL056C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
SDS23	YGL056C	YJR096W	P47137	282 aa		4.62	□□□□□ -1.67
SDS23	YGL056C	YGR283C	P53336	341 aa	Predicted RBP	4.62	□□□□□ -1.67
SDS23	YGL056C	TRE2	Q08693	809 aa		4.62	□□□□□ -1.67
SDS23	YGL056C	MPD2	Q99316	277 aa		4.62	□□□□□ -1.67
SDS23	YGL056C	SWR1	Q05471	1514 aa		4.62	□□□□□ -1.67
SDS23	YGL056C	SLA2	P33338	968 aa		4.61	□□□□□ -1.67
SDS23	YGL056C	YFL054C	P43549	646 aa		4.61	□□□□□ -1.67
SDS23	YGL056C	SRP1	Q02821	542 aa	Known RBP	4.61	□□□□□ -1.67
SDS23	YGL056C	SLP1	Q12232	587 aa		4.61	□□□□□ -1.67
SDS23	YGL056C	HIR3	P47171	1648 aa		4.61	□□□□□ -1.67
SDS23	YGL056C	TRX2	P22803	104 aa	Known RBP	4.61	□□□□□ -1.67
SDS23	YGL056C	PRO1	P32264	428 aa		4.61	□□□□□ -1.67
SDS23	YGL056C	REC104	P33323	182 aa		4.61	□□□□□ -1.67
SDS23	YGL056C	TFC4	P33339	1025 aa		4.61	□□□□□ -1.67
SDS23	YGL056C	YBR238C	P38330	731 aa	Known RBP	4.61	□□□□□ -1.67
SDS23	YGL056C	PEA2	P40091	420 aa		4.61	□□□□□ -1.67
SDS23	YGL056C	NCE103	P53615	221 aa		4.61	□□□□□ -1.67
SDS23	YGL056C	CEF1	Q03654	590 aa	Predicted RBP	4.61	□□□□□ -1.67
SDS23	YGL056C	YLR257W	Q06146	321 aa	Known RBP	4.61	□□□□□ -1.67
SDS23	YGL056C	RSC3	Q06639	885 aa		4.61	□□□□□ -1.67
SDS23	YGL056C	YDL121C	Q07541	149 aa		4.61	□□□□□ -1.67
SDS23	YGL056C	YLL054C	Q12244	843 aa		4.61	□□□□□ -1.67
SDS23	YGL056C	NYV1	Q12255	253 aa		4.61	□□□□□ -1.67
SDS23	YGL056C	THO2	P53552	1597 aa	Known RBP	4.6	□□□□□ -1.67
SDS23	YGL056C	TY4B-P	A0A0B7P3V8	1104 aa		4.6	□□□□□ -1.67
SDS23	YGL056C	SST2	P11972	698 aa	Known RBP	4.6	□□□□□ -1.67
SDS23	YGL056C	PRP19	P32523	503 aa	Known RBP	4.6	□□□□□ -1.67
SDS23	YGL056C	EMC3	P36039	253 aa		4.6	□□□□□ -1.67
SDS23	YGL056C	PCM1	P38628	557 aa	Known RBP	4.6	□□□□□ -1.67
SDS23	YGL056C	NMD3	P38861	518 aa	Known RBP	4.6	□□□□□ -1.67
SDS23	YGL056C	CAF16	P43569	289 aa		4.6	□□□□□ -1.67
SDS23	YGL056C	ATP25	Q03153	612 aa		4.6	□□□□□ -1.67
SDS23	YGL056C	MET7	Q08645	548 aa		4.6	□□□□□ -1.67
SDS23	YGL056C	ACM1	Q08981	209 aa		4.6	□□□□□ -1.67
SDS23	YGL056C	ENV7	Q12003	364 aa		4.6	□□□□□ -1.67
SDS23	YGL056C	TY4A-H	Q6Q5P6	413 aa		4.6	□□□□□ -1.67
SDS23	YGL056C	YEF3	P16521	1044 aa	Known RBP	4.59	□□□□□ -1.67
SDS23	YGL056C	STO1	P34160	861 aa	Known RBP	4.59	□□□□□ -1.67
SDS23	YGL056C	MCD4	P36051	919 aa		4.59	□□□□□ -1.67
SDS23	YGL056C	TSL1	P38427	1098 aa	Known RBP	4.59	□□□□□ -1.67
SDS23	YGL056C	IES5	P40060	125 aa		4.59	□□□□□ -1.67
SDS23	YGL056C	YJL045W	P47052	634 aa		4.59	□□□□□ -1.67
SDS23	YGL056C	KIP3	P53086	805 aa	Known RBP	4.59	□□□□□ -1.67
SDS23	YGL056C	ATG16	Q03818	150 aa		4.59	□□□□□ -1.67
SDS23	YGL056C	DOT1	Q04089	582 aa	Known RBP	4.59	□□□□□ -1.67
SDS23	YGL056C	GUD1	Q07729	489 aa		4.59	□□□□□ -1.67
SDS23	YGL056C	HMG1	P12683	1054 aa		4.58	□□□□□ -1.68
SDS23	YGL056C	MAE1	P36013	669 aa	Known RBP	4.58	□□□□□ -1.68
SDS23	YGL056C	UGA2	P38067	497 aa		4.58	□□□□□ -1.68
SDS23	YGL056C	CKB2	P38930	258 aa		4.58	□□□□□ -1.68
SDS23	YGL056C	OAF1	P39720	1047 aa	Predicted RBP	4.58	□□□□□ -1.68
SDS23	YGL056C	NPP2	P39997	493 aa		4.58	□□□□□ -1.68
SDS23	YGL056C	RPN3	P40016	523 aa	Known RBP	4.58	□□□□□ -1.68
SDS23	YGL056C	CCM1	P48237	864 aa	Predicted RBP	4.58	□□□□□ -1.68
SDS23	YGL056C	AIM14	P53109	570 aa		4.58	□□□□□ -1.68
SDS23	YGL056C	SVL3	Q03088	825 aa	Known RBP	4.58	□□□□□ -1.68
SDS23	YGL056C	YOR223W	Q12015	292 aa		4.58	□□□□□ -1.68
SDS23	YGL056C	PER1	P25625	357 aa		4.57	□□□□□ -1.68
SDS23	YGL056C	HOG1	P32485	435 aa		4.57	□□□□□ -1.68
SDS23	YGL056C	NIT2	P47016	307 aa		4.57	□□□□□ -1.68
SDS23	YGL056C	DAM1	P53267	343 aa		4.57	□□□□□ -1.68
SDS23	YGL056C	GIS1	Q03833	894 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms