RNA–Protein interactions for RNA: YGL003C

CDH1, Transcript of Activator of anaphase-promoting complex/cyclosome (APC/C), yeastyeast

Gene CDH1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDH1YGL003C TAF2P23255 1407 aa3.54□□□□□ -1.84
CDH1YGL003C SSK2P53599 1579 aa3.54□□□□□ -1.84
CDH1YGL003C REV3P14284 1504 aa3.54□□□□□ -1.84
CDH1YGL003C HSL1P34244 1518 aa3.54□□□□□ -1.84
CDH1YGL003C NOT3P06102 836 aaKnown RBP3.54□□□□□ -1.84
CDH1YGL003C MEF1P25039 761 aa3.54□□□□□ -1.84
CDH1YGL003C KRR1P25586 316 aaPredicted RBP3.54□□□□□ -1.84
CDH1YGL003C SCT1P32784 759 aa3.54□□□□□ -1.84
CDH1YGL003C TIM23P32897 222 aa3.54□□□□□ -1.84
CDH1YGL003C ALG3P38179 458 aa3.54□□□□□ -1.84
CDH1YGL003C YBR184WP38299 523 aa3.54□□□□□ -1.84
CDH1YGL003C SIC1P38634 284 aa3.54□□□□□ -1.84
CDH1YGL003C YAP1801P38856 637 aa3.54□□□□□ -1.84
CDH1YGL003C MPH1P40562 993 aa3.54□□□□□ -1.84
CDH1YGL003C PEX8P53248 589 aa3.54□□□□□ -1.84
CDH1YGL003C NNF2P53253 936 aa3.54□□□□□ -1.84
CDH1YGL003C RIA1P53893 1110 aa3.54□□□□□ -1.84
CDH1YGL003C VTI1Q04338 217 aa3.54□□□□□ -1.84
CDH1YGL003C YLR352WQ06479 807 aa3.54□□□□□ -1.84
CDH1YGL003C FMP25Q08023 583 aa3.54□□□□□ -1.84
CDH1YGL003C SLX4Q12098 748 aa3.54□□□□□ -1.84
CDH1YGL003C OSH2Q12451 1283 aa3.54□□□□□ -1.84
CDH1YGL003C PTC5Q12511 572 aa3.54□□□□□ -1.84
CDH1YGL003C TY1B-DR4Q07793 1604 aa3.54□□□□□ -1.84
CDH1YGL003C SWR1Q05471 1514 aa3.53□□□□□ -1.84
CDH1YGL003C TOM70P07213 617 aaKnown RBP3.53□□□□□ -1.84
CDH1YGL003C PCT1P13259 424 aa3.53□□□□□ -1.84
CDH1YGL003C YKL107WP34251 309 aa3.53□□□□□ -1.84
CDH1YGL003C MOT2P34909 587 aaKnown RBP3.53□□□□□ -1.84
CDH1YGL003C PEX5P35056 612 aa3.53□□□□□ -1.84
CDH1YGL003C MCM7P38132 845 aa3.53□□□□□ -1.84
CDH1YGL003C YHR020WP38708 688 aaKnown RBP3.53□□□□□ -1.84
CDH1YGL003C CHZ1P40019 153 aaPredicted RBP3.53□□□□□ -1.84
CDH1YGL003C VID27P40157 782 aa3.53□□□□□ -1.84
CDH1YGL003C YGR045CP53229 120 aa3.53□□□□□ -1.84
CDH1YGL003C YNR063WP53749 607 aa3.53□□□□□ -1.84
CDH1YGL003C FOL1P53848 824 aa3.53□□□□□ -1.84
CDH1YGL003C ESC2Q06340 456 aa3.53□□□□□ -1.84
CDH1YGL003C YPR172WQ06608 200 aa3.53□□□□□ -1.84
CDH1YGL003C AOS1Q06624 347 aa3.53□□□□□ -1.84
CDH1YGL003C VIP1Q06685 1146 aaKnown RBP3.53□□□□□ -1.84
CDH1YGL003C SIN3P22579 1536 aa3.53□□□□□ -1.84
CDH1YGL003C AI1P03875 834 aa3.53□□□□□ -1.85
CDH1YGL003C SBP1P10080 294 aaKnown RBP3.53□□□□□ -1.85
CDH1YGL003C ACE2P21192 770 aa3.53□□□□□ -1.85
CDH1YGL003C RPL8BP29453 256 aaKnown RBP3.53□□□□□ -1.85
CDH1YGL003C LTV1P34078 463 aa3.53□□□□□ -1.85
CDH1YGL003C YKL100CP34248 587 aa3.53□□□□□ -1.85
CDH1YGL003C RRM3P38766 723 aa3.53□□□□□ -1.85
CDH1YGL003C GGA2P38817 585 aaKnown RBP3.53□□□□□ -1.85
CDH1YGL003C CRP1P38845 465 aaKnown RBP3.53□□□□□ -1.85
CDH1YGL003C DOT6P40059 670 aaKnown RBP3.53□□□□□ -1.85
CDH1YGL003C IES5P40060 125 aa3.53□□□□□ -1.85
CDH1YGL003C ERP6P53198 216 aa3.53□□□□□ -1.85
CDH1YGL003C ELA1P53861 379 aaPredicted RBP3.53□□□□□ -1.85
CDH1YGL003C TIM11P81449 96 aaPredicted RBP3.53□□□□□ -1.85
CDH1YGL003C DOT1Q04089 582 aaKnown RBP3.53□□□□□ -1.85
CDH1YGL003C RPN7Q06103 429 aaKnown RBP3.53□□□□□ -1.85
CDH1YGL003C FLC1Q08967 793 aa3.53□□□□□ -1.85
CDH1YGL003C YPL260WQ08977 551 aa3.53□□□□□ -1.85
CDH1YGL003C ALG6Q12001 544 aaKnown RBP3.53□□□□□ -1.85
CDH1YGL003C GNT1Q12096 491 aa3.53□□□□□ -1.85
CDH1YGL003C TMA7Q3E764 64 aaKnown RBP3.53□□□□□ -1.85
CDH1YGL003C MHP1P43638 1398 aa3.52□□□□□ -1.85
CDH1YGL003C YCF1P39109 1515 aaKnown RBP3.52□□□□□ -1.85
CDH1YGL003C ESP1Q03018 1630 aa3.52□□□□□ -1.85
CDH1YGL003C CIT1P00890 479 aa3.52□□□□□ -1.85
CDH1YGL003C MPH2P0CD99 609 aa3.52□□□□□ -1.85
CDH1YGL003C PHO8P11491 566 aa3.52□□□□□ -1.85
CDH1YGL003C PRP9P19736 530 aaKnown RBP3.52□□□□□ -1.85
CDH1YGL003C HSP60P19882 572 aaKnown RBP3.52□□□□□ -1.85
CDH1YGL003C PUF4P25339 888 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
CDH1YGL003C MSP1P28737 362 aa3.52□□□□□ -1.85
CDH1YGL003C SMY2P32909 740 aaKnown RBP3.52□□□□□ -1.85
CDH1YGL003C YKL050CP35736 922 aa3.52□□□□□ -1.85
CDH1YGL003C APL2P36000 726 aaPredicted RBP3.52□□□□□ -1.85
CDH1YGL003C NNK1P36003 928 aa3.52□□□□□ -1.85
CDH1YGL003C QNS1P38795 714 aaKnown RBP3.52□□□□□ -1.85
CDH1YGL003C RRP8P38961 392 aaKnown RBP3.52□□□□□ -1.85
CDH1YGL003C CAJ1P39101 391 aa3.52□□□□□ -1.85
CDH1YGL003C YGL176CP46945 554 aa3.52□□□□□ -1.85
CDH1YGL003C YGR125WP53273 1036 aa3.52□□□□□ -1.85
CDH1YGL003C UTP8P53276 713 aaKnown RBP3.52□□□□□ -1.85
CDH1YGL003C RSA3Q05942 220 aaKnown RBP3.52□□□□□ -1.85
CDH1YGL003C TSR2Q06672 205 aaKnown RBP3.52□□□□□ -1.85
CDH1YGL003C IRC3Q06683 689 aa3.52□□□□□ -1.85
CDH1YGL003C TY1A-NL1Q12391 440 aaKnown RBP3.52□□□□□ -1.85
CDH1YGL003C NOP14Q99207 810 aaKnown RBP3.52□□□□□ -1.85
CDH1YGL003C POL1P13382 1468 aa3.51□□□□□ -1.85
CDH1YGL003C CDC31P06704 161 aaKnown RBP3.51□□□□□ -1.85
CDH1YGL003C TPM1P17536 199 aaKnown RBP3.51□□□□□ -1.85
CDH1YGL003C MLS1P30952 554 aa3.51□□□□□ -1.85
CDH1YGL003C SSH4P32343 579 aa3.51□□□□□ -1.85
CDH1YGL003C VPH1P32563 840 aaKnown RBP3.51□□□□□ -1.85
CDH1YGL003C SFA1P32771 386 aa3.51□□□□□ -1.85
CDH1YGL003C PIM1P36775 1133 aa3.51□□□□□ -1.85
CDH1YGL003C ECM1P39715 212 aa3.51□□□□□ -1.85
CDH1YGL003C RSP5P39940 809 aaKnown RBP3.51□□□□□ -1.85
CDH1YGL003C PFD1P46988 109 aa3.51□□□□□ -1.85
CDH1YGL003C DAS1P47005 663 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms