RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP6	YFR010W	MON1	P53129	644 aa		4.65	□□□□□ -1.67
UBP6	YFR010W	MET14	Q02196	202 aa		4.65	□□□□□ -1.67
UBP6	YFR010W	TFB2	Q02939	513 aa		4.65	□□□□□ -1.67
UBP6	YFR010W	ESC2	Q06340	456 aa		4.65	□□□□□ -1.67
UBP6	YFR010W	SPN1	Q06505	410 aa	Predicted RBP	4.65	□□□□□ -1.67
UBP6	YFR010W	PMT7	Q06644	662 aa		4.65	□□□□□ -1.67
UBP6	YFR010W	APC5	Q08683	685 aa		4.65	□□□□□ -1.67
UBP6	YFR010W	YOR223W	Q12015	292 aa		4.65	□□□□□ -1.67
UBP6	YFR010W	MCD1	Q12158	566 aa		4.65	□□□□□ -1.67
UBP6	YFR010W	INO80	P53115	1489 aa		4.65	□□□□□ -1.67
UBP6	YFR010W	NUP145	P49687	1317 aa		4.64	□□□□□ -1.67
UBP6	YFR010W	TRP3	P00937	484 aa		4.64	□□□□□ -1.67
UBP6	YFR010W	GAL1	P04385	528 aa		4.64	□□□□□ -1.67
UBP6	YFR010W	PRE9	P23638	258 aa	Known RBP	4.64	□□□□□ -1.67
UBP6	YFR010W	CDC60	P26637	1090 aa	Known RBP	4.64	□□□□□ -1.67
UBP6	YFR010W	VMA8	P32610	256 aa	Known RBP	4.64	□□□□□ -1.67
UBP6	YFR010W	GGA2	P38817	585 aa	Known RBP	4.64	□□□□□ -1.67
UBP6	YFR010W	GPG1	P53130	126 aa		4.64	□□□□□ -1.67
UBP6	YFR010W	ELA1	P53861	379 aa	Predicted RBP	4.64	□□□□□ -1.67
UBP6	YFR010W	RRP6	Q12149	733 aa	Known RBP	4.64	□□□□□ -1.67
UBP6	YFR010W	CAN1	P04817	590 aa		4.63	□□□□□ -1.67
UBP6	YFR010W	KAR2	P16474	682 aa	Known RBP	4.63	□□□□□ -1.67
UBP6	YFR010W	MCM5	P29496	775 aa	Known RBP	4.63	□□□□□ -1.67
UBP6	YFR010W	MCM10	P32354	571 aa		4.63	□□□□□ -1.67
UBP6	YFR010W	MOT2	P34909	587 aa	Known RBP	4.63	□□□□□ -1.67
UBP6	YFR010W	YKL069W	P36088	180 aa		4.63	□□□□□ -1.67
UBP6	YFR010W	CCT3	P39077	534 aa	Known RBP	4.63	□□□□□ -1.67
UBP6	YFR010W	YGR125W	P53273	1036 aa		4.63	□□□□□ -1.67
UBP6	YFR010W	YGR130C	P53278	816 aa		4.63	□□□□□ -1.67
UBP6	YFR010W	UME1	Q03010	460 aa		4.63	□□□□□ -1.67
UBP6	YFR010W	YDR286C	Q05530	114 aa		4.63	□□□□□ -1.67
UBP6	YFR010W	YPR172W	Q06608	200 aa		4.63	□□□□□ -1.67
UBP6	YFR010W	MED7	Q08278	222 aa		4.63	□□□□□ -1.67
UBP6	YFR010W	SSP2	Q08646	371 aa		4.63	□□□□□ -1.67
UBP6	YFR010W	SAC3	P46674	1301 aa		4.63	□□□□□ -1.67
UBP6	YFR010W	HXK1	P04806	485 aa	Known RBP	4.62	□□□□□ -1.67
UBP6	YFR010W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.62	□□□□□ -1.67
UBP6	YFR010W	TY1A-DR6	P0CX70	440 aa		4.62	□□□□□ -1.67
UBP6	YFR010W	TY1A-ER1	P0CX71	440 aa		4.62	□□□□□ -1.67
UBP6	YFR010W	TY1A-LR2	P0CX72	440 aa		4.62	□□□□□ -1.67
UBP6	YFR010W	TY1A-PL	P0CX73	440 aa		4.62	□□□□□ -1.67
UBP6	YFR010W	TY1A-JR1	P0CX74	440 aa		4.62	□□□□□ -1.67
UBP6	YFR010W	TY1A-LR3	P0CX75	440 aa		4.62	□□□□□ -1.67
UBP6	YFR010W	TY1A-ML2	P0CX76	440 aa		4.62	□□□□□ -1.67
UBP6	YFR010W	CDC34	P14682	295 aa		4.62	□□□□□ -1.67
UBP6	YFR010W	PTP2	P29461	750 aa		4.62	□□□□□ -1.67
UBP6	YFR010W	CHS3	P29465	1165 aa		4.62	□□□□□ -1.67
UBP6	YFR010W	PLC1	P32383	869 aa		4.62	□□□□□ -1.67
UBP6	YFR010W	EUG1	P32474	517 aa		4.62	□□□□□ -1.67
UBP6	YFR010W	YGR053C	P53234	283 aa		4.62	□□□□□ -1.67
UBP6	YFR010W	UTP22	P53254	1237 aa	Predicted RBP	4.62	□□□□□ -1.67
UBP6	YFR010W	ISA1	Q07821	250 aa	Predicted RBP	4.62	□□□□□ -1.67
UBP6	YFR010W	THI73	Q07904	523 aa		4.62	□□□□□ -1.67
UBP6	YFR010W	NEW1	Q08972	1196 aa	Known RBP	4.62	□□□□□ -1.67
UBP6	YFR010W	YDR056C	Q12025	205 aa		4.62	□□□□□ -1.67
UBP6	YFR010W	TY1A-GR1	Q12085	440 aa		4.62	□□□□□ -1.67
UBP6	YFR010W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.62	□□□□□ -1.67
UBP6	YFR010W	TY1A-OL	Q92392	440 aa	Known RBP	4.62	□□□□□ -1.67
UBP6	YFR010W	CMP2	P14747	604 aa		4.62	□□□□□ -1.67
UBP6	YFR010W	APA1	P16550	321 aa	Known RBP	4.62	□□□□□ -1.67
UBP6	YFR010W	PXA2	P34230	853 aa		4.62	□□□□□ -1.67
UBP6	YFR010W	TOS1	P38288	455 aa		4.62	□□□□□ -1.67
UBP6	YFR010W	RRF1	P38771	230 aa		4.62	□□□□□ -1.67
UBP6	YFR010W	RVS167	P39743	482 aa	Known RBP	4.62	□□□□□ -1.67
UBP6	YFR010W	TMA108	P40462	946 aa		4.62	□□□□□ -1.67
UBP6	YFR010W	SGM1	P47166	707 aa		4.62	□□□□□ -1.67
UBP6	YFR010W	MEC3	Q02574	474 aa		4.62	□□□□□ -1.67
UBP6	YFR010W	UGO1	Q03327	502 aa		4.62	□□□□□ -1.67
UBP6	YFR010W	NSE5	Q03718	556 aa		4.62	□□□□□ -1.67
UBP6	YFR010W	DOT1	Q04089	582 aa	Known RBP	4.62	□□□□□ -1.67
UBP6	YFR010W	YCS4	Q06156	1176 aa		4.62	□□□□□ -1.67
UBP6	YFR010W	TOS4	Q06266	489 aa		4.62	□□□□□ -1.67
UBP6	YFR010W	GIC2	Q06648	383 aa		4.62	□□□□□ -1.67
UBP6	YFR010W	SPO75	Q07798	868 aa		4.62	□□□□□ -1.67
UBP6	YFR010W	SDH5	Q08230	162 aa		4.62	□□□□□ -1.67
UBP6	YFR010W	PGC1	Q08959	321 aa		4.62	□□□□□ -1.67
UBP6	YFR010W	FAP7	Q12055	197 aa	Predicted RBP	4.62	□□□□□ -1.67
UBP6	YFR010W	HSP78	P33416	811 aa		4.61	□□□□□ -1.67
UBP6	YFR010W	GPT2	P36148	743 aa		4.61	□□□□□ -1.67
UBP6	YFR010W	ESL2	P36168	1195 aa		4.61	□□□□□ -1.67
UBP6	YFR010W	RIM4	P38741	713 aa		4.61	□□□□□ -1.67
UBP6	YFR010W	AVT1	P47082	602 aa		4.61	□□□□□ -1.67
UBP6	YFR010W	YLL054C	Q12244	843 aa		4.61	□□□□□ -1.67
UBP6	YFR010W	OSH2	Q12451	1283 aa		4.61	□□□□□ -1.67
UBP6	YFR010W	CYC7	P00045	113 aa		4.6	□□□□□ -1.67
UBP6	YFR010W	RED1	P14291	827 aa		4.6	□□□□□ -1.67
UBP6	YFR010W	DBF20	P32328	564 aa		4.6	□□□□□ -1.67
UBP6	YFR010W	IME2	P32581	645 aa		4.6	□□□□□ -1.67
UBP6	YFR010W	DUT1	P33317	147 aa		4.6	□□□□□ -1.67
UBP6	YFR010W	REI1	P38344	393 aa	Predicted RBP	4.6	□□□□□ -1.67
UBP6	YFR010W	NPR3	P38742	1146 aa		4.6	□□□□□ -1.67
UBP6	YFR010W	POP2	P39008	433 aa		4.6	□□□□□ -1.67
UBP6	YFR010W	SPO74	P45819	413 aa		4.6	□□□□□ -1.67
UBP6	YFR010W	DAL4	Q04895	635 aa		4.6	□□□□□ -1.67
UBP6	YFR010W	MDM38	Q08179	573 aa		4.6	□□□□□ -1.67
UBP6	YFR010W	TRE2	Q08693	809 aa		4.6	□□□□□ -1.67
UBP6	YFR010W	ALG6	Q12001	544 aa	Known RBP	4.6	□□□□□ -1.67
UBP6	YFR010W	HSP60	P19882	572 aa	Known RBP	4.59	□□□□□ -1.67
UBP6	YFR010W	MSB1	P21339	1137 aa	Known RBP	4.59	□□□□□ -1.67
UBP6	YFR010W	APN1	P22936	367 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 121.9 ms