RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W ADY3Q07732 790 aa1.85□□□□□ -2.11
SMC1YFL008W MED7Q08278 222 aa1.85□□□□□ -2.11
SMC1YFL008W SRO9P25567 434 aaKnown RBP1.85□□□□□ -2.11
SMC1YFL008W LYP1P32487 611 aa1.85□□□□□ -2.11
SMC1YFL008W UBS1P38290 277 aa1.85□□□□□ -2.11
SMC1YFL008W MBP1P39678 833 aa1.85□□□□□ -2.11
SMC1YFL008W TAF8Q03750 510 aa1.85□□□□□ -2.11
SMC1YFL008W GNT1Q12096 491 aa1.85□□□□□ -2.11
SMC1YFL008W DFG16Q99234 619 aa1.85□□□□□ -2.11
SMC1YFL008W PRP4P20053 465 aaKnown RBP1.84□□□□□ -2.11
SMC1YFL008W VPS62P53285 467 aa1.84□□□□□ -2.11
SMC1YFL008W CDA1Q06702 301 aa1.84□□□□□ -2.11
SMC1YFL008W TY3B-IQ7LHG5 1498 aaKnown RBP1.84□□□□□ -2.11
SMC1YFL008W KAR2P16474 682 aaKnown RBP1.84□□□□□ -2.12
SMC1YFL008W PEP7P32609 515 aa1.84□□□□□ -2.12
SMC1YFL008W VPS53P47061 822 aa1.84□□□□□ -2.12
SMC1YFL008W RCM1P53972 490 aa1.84□□□□□ -2.12
SMC1YFL008W HOS3Q02959 697 aaKnown RBP1.84□□□□□ -2.12
SMC1YFL008W BDF2Q07442 638 aa1.84□□□□□ -2.12
SMC1YFL008W YPL260WQ08977 551 aa1.84□□□□□ -2.12
SMC1YFL008W HMI1Q12039 706 aa1.84□□□□□ -2.12
SMC1YFL008W TOP3P13099 656 aa1.84□□□□□ -2.12
SMC1YFL008W ALD6P54115 500 aaKnown RBP1.84□□□□□ -2.12
SMC1YFL008W RGC1Q06108 1083 aaKnown RBP1.84□□□□□ -2.12
SMC1YFL008W MRL1Q06815 381 aa1.84□□□□□ -2.12
SMC1YFL008W YOR059CQ08448 450 aaKnown RBP1.84□□□□□ -2.12
SMC1YFL008W YLL058WQ12198 575 aa1.84□□□□□ -2.12
SMC1YFL008W PTC5Q12511 572 aa1.84□□□□□ -2.12
SMC1YFL008W GEA2P39993 1459 aaKnown RBP1.83□□□□□ -2.12
SMC1YFL008W GRX1P25373 110 aaKnown RBP1.83□□□□□ -2.12
SMC1YFL008W ASF1P32447 279 aa1.83□□□□□ -2.12
SMC1YFL008W YKL077WP36081 392 aa1.83□□□□□ -2.12
SMC1YFL008W FLR1P38124 548 aa1.83□□□□□ -2.12
SMC1YFL008W YAP1801P38856 637 aa1.83□□□□□ -2.12
SMC1YFL008W PIK1P39104 1066 aa1.83□□□□□ -2.12
SMC1YFL008W NCS6P53088 359 aa1.83□□□□□ -2.12
SMC1YFL008W MRPS35P53292 345 aa1.83□□□□□ -2.12
SMC1YFL008W MDM38Q08179 573 aa1.83□□□□□ -2.12
SMC1YFL008W OXR1Q08952 273 aa1.83□□□□□ -2.12
SMC1YFL008W TUB3P09734 445 aaKnown RBP1.83□□□□□ -2.12
SMC1YFL008W PRE10P21242 288 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12 RIP-Chip
SMC1YFL008W PET112P33893 541 aa1.83□□□□□ -2.12
SMC1YFL008W MOT2P34909 587 aaKnown RBP1.83□□□□□ -2.12
SMC1YFL008W RSM26P47141 266 aa1.83□□□□□ -2.12
SMC1YFL008W RTA1P53047 317 aa1.83□□□□□ -2.12
SMC1YFL008W TPP1Q03796 238 aa1.83□□□□□ -2.12
SMC1YFL008W RPL8BP29453 256 aaKnown RBP1.82□□□□□ -2.12
SMC1YFL008W SLD2P34252 453 aa1.82□□□□□ -2.12
SMC1YFL008W MGE1P38523 228 aa1.82□□□□□ -2.12
SMC1YFL008W SRT1Q03175 343 aa1.82□□□□□ -2.12
SMC1YFL008W RIM15P43565 1770 aa1.82□□□□□ -2.12
SMC1YFL008W SOD2P00447 233 aa1.82□□□□□ -2.12
SMC1YFL008W PTC7P38797 343 aa1.82□□□□□ -2.12
SMC1YFL008W YGL176CP46945 554 aa1.82□□□□□ -2.12
SMC1YFL008W GDE1Q02979 1223 aa1.82□□□□□ -2.12
SMC1YFL008W RPN4Q03465 531 aa1.82□□□□□ -2.12
SMC1YFL008W ACM1Q08981 209 aa1.82□□□□□ -2.12
SMC1YFL008W RKM4Q12504 494 aa1.82□□□□□ -2.12
SMC1YFL008W INO1P11986 533 aa1.82□□□□□ -2.12
SMC1YFL008W SBA1P28707 216 aaKnown RBP1.82□□□□□ -2.12
SMC1YFL008W MDL2P33311 773 aa1.82□□□□□ -2.12
SMC1YFL008W ECM21P38167 1117 aaKnown RBP1.82□□□□□ -2.12
SMC1YFL008W FMP25Q08023 583 aa1.82□□□□□ -2.12
SMC1YFL008W YCR015CP25616 317 aa1.81□□□□□ -2.12
SMC1YFL008W CDC20P26309 610 aa1.81□□□□□ -2.12
SMC1YFL008W DCG1P32460 244 aa1.81□□□□□ -2.12
SMC1YFL008W YBR184WP38299 523 aa1.81□□□□□ -2.12
SMC1YFL008W YHL012WP38709 493 aa1.81□□□□□ -2.12
SMC1YFL008W MEF2P39677 819 aa1.81□□□□□ -2.12
SMC1YFL008W EXG2P52911 562 aa1.81□□□□□ -2.12
SMC1YFL008W UTP8P53276 713 aaKnown RBP1.81□□□□□ -2.12
SMC1YFL008W MRPL22P53881 309 aa1.81□□□□□ -2.12
SMC1YFL008W TRM13Q12383 476 aa1.81□□□□□ -2.12
SMC1YFL008W YPT7P32939 208 aa1.81□□□□□ -2.12
SMC1YFL008W SHU2P38957 223 aa1.81□□□□□ -2.12
SMC1YFL008W GEM1P39722 662 aa1.81□□□□□ -2.12
SMC1YFL008W RRT14P40470 206 aa1.81□□□□□ -2.12
SMC1YFL008W MET12P46151 657 aa1.81□□□□□ -2.12
SMC1YFL008W MTR4P47047 1073 aaKnown RBP1.81□□□□□ -2.12
SMC1YFL008W YNR063WP53749 607 aa1.81□□□□□ -2.12
SMC1YFL008W YPL277CQ08989 487 aa1.81□□□□□ -2.12
SMC1YFL008W TMA46Q12000 345 aaKnown RBP1.81□□□□□ -2.12
SMC1YFL008W PRO1P32264 428 aa1.81□□□□□ -2.12
SMC1YFL008W NIT1P40447 199 aa1.81□□□□□ -2.12
SMC1YFL008W SEC26P41810 973 aaKnown RBP1.81□□□□□ -2.12
SMC1YFL008W SFB2P53953 876 aa1.81□□□□□ -2.12
SMC1YFL008W HBN1Q96VH4 193 aa1.81□□□□□ -2.12
SMC1YFL008W BAS1P22035 811 aa1.8□□□□□ -2.12
SMC1YFL008W VAC8P39968 578 aa1.8□□□□□ -2.12
SMC1YFL008W HDA1P53973 706 aa1.8□□□□□ -2.12
SMC1YFL008W DED1P06634 604 aaKnown RBP1.8□□□□□ -2.12
SMC1YFL008W ECM2P38241 364 aaKnown RBP1.8□□□□□ -2.12
SMC1YFL008W ETP1P38748 585 aaKnown RBP1.8□□□□□ -2.12
SMC1YFL008W CHS7P38843 316 aa1.8□□□□□ -2.12
SMC1YFL008W GYP8P43570 497 aa1.8□□□□□ -2.12
SMC1YFL008W NPL3Q01560 414 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
SMC1YFL008W TSC11P40061 1430 aa1.8□□□□□ -2.12
SMC1YFL008W CYC1P00044 109 aaPredicted RBP1.8□□□□□ -2.12
SMC1YFL008W CCC2P38995 1004 aa1.8□□□□□ -2.12
SMC1YFL008W IRR1P40541 1150 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms