RNA–Protein interactions for RNA: YDR412W

RRP17, Transcript of Component of the pre-60S pre-ribosomal particle, yeastyeast

Gene RRP17, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP17YDR412W TY1B-DR4Q07793 1604 aa6.37□□□□□ -1.39
RRP17YDR412W POA1P38218 177 aa6.37□□□□□ -1.39
RRP17YDR412W YBR184WP38299 523 aa6.37□□□□□ -1.39
RRP17YDR412W TSL1P38427 1098 aaKnown RBP6.37□□□□□ -1.39
RRP17YDR412W PFD1P46988 109 aa6.37□□□□□ -1.39
RRP17YDR412W PHO23P50947 330 aa6.37□□□□□ -1.39
RRP17YDR412W MCM6P53091 1017 aaKnown RBP6.37□□□□□ -1.39
RRP17YDR412W PBP1P53297 722 aaKnown RBP6.37□□□□□ -1.39
RRP17YDR412W MET12P46151 657 aa6.36□□□□□ -1.39
RRP17YDR412W SPE1P08432 466 aa6.35□□□□□ -1.39
RRP17YDR412W NAP1P25293 417 aaKnown RBP6.35□□□□□ -1.39
RRP17YDR412W HBS1P32769 611 aaKnown RBP6.35□□□□□ -1.39
RRP17YDR412W GYP7P48365 746 aa6.34□□□□□ -1.39
RRP17YDR412W BUL2Q03758 920 aaKnown RBP6.34□□□□□ -1.39
RRP17YDR412W NOP12Q08208 459 aaKnown RBP6.34□□□□□ -1.39
RRP17YDR412W HIS5P07172 385 aa6.33□□□□□ -1.4
RRP17YDR412W GRX1P25373 110 aaKnown RBP6.33□□□□□ -1.4
RRP17YDR412W MRP8P35719 219 aa6.33□□□□□ -1.4
RRP17YDR412W CHA4P43634 648 aa6.33□□□□□ -1.4
RRP17YDR412W LAS17Q12446 633 aa6.33□□□□□ -1.4
RRP17YDR412W KCS1Q12494 1050 aa6.33□□□□□ -1.4
RRP17YDR412W PBY1P38254 753 aa6.32□□□□□ -1.4
RRP17YDR412W YER158CP40095 573 aa6.32□□□□□ -1.4
RRP17YDR412W MNN10P50108 393 aaKnown RBP6.32□□□□□ -1.4
RRP17YDR412W SRP1Q02821 542 aaKnown RBP6.32□□□□□ -1.4
RRP17YDR412W FMP25Q08023 583 aa6.32□□□□□ -1.4
RRP17YDR412W STE11P23561 717 aa6.31□□□□□ -1.4
RRP17YDR412W PPH3P32345 308 aa6.31□□□□□ -1.4
RRP17YDR412W SNF7P39929 240 aaKnown RBP6.31□□□□□ -1.4
RRP17YDR412W IRR1P40541 1150 aa6.31□□□□□ -1.4
RRP17YDR412W HCM1P25364 564 aa6.3□□□□□ -1.4
RRP17YDR412W YKE2P52553 114 aa6.3□□□□□ -1.4
RRP17YDR412W SLI1P53304 468 aa6.3□□□□□ -1.4
RRP17YDR412W UBX5Q06682 500 aa6.3□□□□□ -1.4
RRP17YDR412W NTO1Q12311 748 aa6.3□□□□□ -1.4
RRP17YDR412W PMA1P05030 918 aaKnown RBP6.29□□□□□ -1.4
RRP17YDR412W HSF1P10961 833 aa6.29□□□□□ -1.4
RRP17YDR412W AAR2P32357 355 aaPredicted RBP6.29□□□□□ -1.4
RRP17YDR412W YRO2P38079 344 aa6.29□□□□□ -1.4
RRP17YDR412W YBR284WP38150 797 aa6.29□□□□□ -1.4
RRP17YDR412W TOK1P40310 691 aa6.28□□□□□ -1.4
RRP17YDR412W EXG2P52911 562 aa6.28□□□□□ -1.4
RRP17YDR412W NCS6P53088 359 aa6.28□□□□□ -1.4
RRP17YDR412W SUN4P53616 420 aa6.28□□□□□ -1.4
RRP17YDR412W SSL1Q04673 461 aaPredicted RBP6.28□□□□□ -1.4
RRP17YDR412W TUB2P02557 457 aaKnown RBP6.27□□□□□ -1.41
RRP17YDR412W RPL8BP29453 256 aaKnown RBP6.27□□□□□ -1.41
RRP17YDR412W DCG1P32460 244 aa6.27□□□□□ -1.41
RRP17YDR412W YBR238CP38330 731 aaKnown RBP6.27□□□□□ -1.41
RRP17YDR412W CCC2P38995 1004 aa6.27□□□□□ -1.41
RRP17YDR412W SIT1P39980 628 aa6.27□□□□□ -1.41
RRP17YDR412W URM1P40554 99 aaPredicted RBP6.27□□□□□ -1.41
RRP17YDR412W ALR2P43553 858 aa6.27□□□□□ -1.41
RRP17YDR412W YPR196WQ06595 470 aa6.27□□□□□ -1.41
RRP17YDR412W NPC2Q12408 173 aa6.27□□□□□ -1.41
RRP17YDR412W NOT3P06102 836 aaKnown RBP6.26□□□□□ -1.41
RRP17YDR412W RPD3P32561 433 aa6.26□□□□□ -1.41
RRP17YDR412W STE14P32584 239 aa6.26□□□□□ -1.41
RRP17YDR412W KRI1P42846 591 aaKnown RBP6.26□□□□□ -1.41
RRP17YDR412W SLU7Q02775 382 aaKnown RBP6.26□□□□□ -1.41
RRP17YDR412W UPC2Q12151 913 aa6.26□□□□□ -1.41
RRP17YDR412W TOP3P13099 656 aa6.25□□□□□ -1.41
RRP17YDR412W RAD4P14736 754 aa6.25□□□□□ -1.41
RRP17YDR412W CDC48P25694 835 aaKnown RBP6.25□□□□□ -1.41
RRP17YDR412W YKR078WP36158 585 aaKnown RBP6.25□□□□□ -1.41
RRP17YDR412W BUL1P48524 976 aa6.25□□□□□ -1.41
RRP17YDR412W KIN4Q01919 800 aa6.25□□□□□ -1.41
RRP17YDR412W YPR071WQ12346 211 aa6.25□□□□□ -1.41
RRP17YDR412W SPT6P23615 1451 aaKnown RBP6.24□□□□□ -1.41
RRP17YDR412W TRM2P33753 639 aa6.24□□□□□ -1.41
RRP17YDR412W RAI1P53063 387 aaKnown RBP6.24□□□□□ -1.41
RRP17YDR412W PUS9Q12069 462 aa6.24□□□□□ -1.41
RRP17YDR412W WRS1Q12109 432 aaKnown RBP6.24□□□□□ -1.41
RRP17YDR412W HBN1Q96VH4 193 aa6.24□□□□□ -1.41
RRP17YDR412W MSD1P15179 658 aaKnown RBP6.23□□□□□ -1.41
RRP17YDR412W MSS4P38994 779 aa6.23□□□□□ -1.41
RRP17YDR412W UTP8P53276 713 aaKnown RBP6.23□□□□□ -1.41
RRP17YDR412W NAN1Q02931 896 aaKnown RBP6.23□□□□□ -1.41
RRP17YDR412W ECM5Q03214 1411 aa6.23□□□□□ -1.41
RRP17YDR412W SPA2P23201 1466 aaKnown RBP6.22□□□□□ -1.41
RRP17YDR412W ADE8P04161 214 aa6.22□□□□□ -1.41
RRP17YDR412W KAR4P25583 335 aa6.22□□□□□ -1.41
RRP17YDR412W STE13P33894 931 aa6.21□□□□□ -1.42
RRP17YDR412W DEF1P35732 738 aaKnown RBP6.21□□□□□ -1.42
RRP17YDR412W YHR020WP38708 688 aaKnown RBP6.21□□□□□ -1.42
RRP17YDR412W MSE1P48525 536 aa6.21□□□□□ -1.42
RRP17YDR412W PSP2P50109 593 aaKnown RBP6.21□□□□□ -1.42
RRP17YDR412W FBP1P09201 348 aa6.2□□□□□ -1.42
RRP17YDR412W PRP9P19736 530 aaKnown RBP6.2□□□□□ -1.42
RRP17YDR412W RPC82P32349 654 aa6.2□□□□□ -1.42
RRP17YDR412W CHS7P38843 316 aa6.2□□□□□ -1.42
RRP17YDR412W HDA1P53973 706 aa6.2□□□□□ -1.42
RRP17YDR412W LCD1Q04377 747 aa6.2□□□□□ -1.42
RRP17YDR412W EAF1Q06337 982 aa6.2□□□□□ -1.42
RRP17YDR412W HSL1P34244 1518 aa6.2□□□□□ -1.42
RRP17YDR412W NPL3Q01560 414 aaKnown RBP RIP-Chip data6.19□□□□□ -1.42not detected
RRP17YDR412W GSF2Q04697 403 aaKnown RBP6.19□□□□□ -1.42
RRP17YDR412W TRM13Q12383 476 aa6.19□□□□□ -1.42
RRP17YDR412W PFK1P16861 987 aaKnown RBP6.18□□□□□ -1.42
RRP17YDR412W PMI40P29952 429 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms