RNA–Protein interactions for RNA: YDR407C

TRS120, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TRS120, Length 3,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS120YDR407C ACK1Q07622 623 aaPredicted RBP3.93□□□□□ -1.78
TRS120YDR407C YPL260WQ08977 551 aa3.93□□□□□ -1.78
TRS120YDR407C UBR1P19812 1950 aa3.93□□□□□ -1.78
TRS120YDR407C RPS9BP05755 195 aaKnown RBP3.93□□□□□ -1.78
TRS120YDR407C PUF4P25339 888 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
TRS120YDR407C END3P39013 349 aa3.93□□□□□ -1.78
TRS120YDR407C NOC2P39744 710 aaKnown RBP3.93□□□□□ -1.78
TRS120YDR407C SIP5P40210 489 aaKnown RBP3.93□□□□□ -1.78
TRS120YDR407C TMA22P47089 198 aaPredicted RBP3.93□□□□□ -1.78
TRS120YDR407C ENP2P48234 707 aaKnown RBP3.93□□□□□ -1.78
TRS120YDR407C USA1Q03714 838 aa3.93□□□□□ -1.78
TRS120YDR407C CSR1Q06705 408 aaKnown RBP3.93□□□□□ -1.78
TRS120YDR407C SLP1Q12232 587 aa3.93□□□□□ -1.78
TRS120YDR407C ADH4P10127 382 aa3.92□□□□□ -1.78
TRS120YDR407C PSO2P30620 661 aa3.92□□□□□ -1.78
TRS120YDR407C TMT1P32643 299 aa3.92□□□□□ -1.78
TRS120YDR407C BCK2P33306 851 aa3.92□□□□□ -1.78
TRS120YDR407C VPS35P34110 944 aa3.92□□□□□ -1.78
TRS120YDR407C MMM1P41800 426 aa3.92□□□□□ -1.78
TRS120YDR407C YDR222WQ04925 415 aa3.92□□□□□ -1.78
TRS120YDR407C PIG1Q06216 648 aa3.92□□□□□ -1.78
TRS120YDR407C SPO21Q12411 609 aa3.92□□□□□ -1.78
TRS120YDR407C ARG4P04076 463 aaPredicted RBP3.92□□□□□ -1.78
TRS120YDR407C RAD10P06838 210 aa3.92□□□□□ -1.78
TRS120YDR407C IME1P21190 360 aa3.92□□□□□ -1.78
TRS120YDR407C RAD53P22216 821 aa3.92□□□□□ -1.78
TRS120YDR407C PLC1P32383 869 aa3.92□□□□□ -1.78
TRS120YDR407C AFG2P32794 780 aa3.92□□□□□ -1.78
TRS120YDR407C YEL1P34225 687 aa3.92□□□□□ -1.78
TRS120YDR407C NDT80P38830 627 aa3.92□□□□□ -1.78
TRS120YDR407C NMD5P46970 1048 aa3.92□□□□□ -1.78
TRS120YDR407C KAP114P53067 1004 aa3.92□□□□□ -1.78
TRS120YDR407C ROD1Q02805 837 aa3.92□□□□□ -1.78
TRS120YDR407C HCR1Q05775 265 aaKnown RBP3.92□□□□□ -1.78
TRS120YDR407C MRD1Q06106 887 aaKnown RBP3.92□□□□□ -1.78
TRS120YDR407C CMS1Q07897 291 aaKnown RBP3.92□□□□□ -1.78
TRS120YDR407C CIT1P00890 479 aa3.92□□□□□ -1.78
TRS120YDR407C KIP1P28742 1111 aa3.92□□□□□ -1.78
TRS120YDR407C SRB4P32569 687 aa3.92□□□□□ -1.78
TRS120YDR407C YSC83P32792 385 aa3.92□□□□□ -1.78
TRS120YDR407C VPS30Q02948 557 aa3.92□□□□□ -1.78
TRS120YDR407C ESF1Q06344 628 aaKnown RBP3.92□□□□□ -1.78
TRS120YDR407C CSC1Q06538 782 aa3.92□□□□□ -1.78
TRS120YDR407C YPL277CQ08989 487 aa3.92□□□□□ -1.78
TRS120YDR407C GRX6Q12438 231 aa3.92□□□□□ -1.78
TRS120YDR407C GFA1P14742 717 aaKnown RBP3.91□□□□□ -1.78
TRS120YDR407C RPL5P26321 297 aaKnown RBP3.91□□□□□ -1.78
TRS120YDR407C SEC20P28791 383 aa3.91□□□□□ -1.78
TRS120YDR407C SAD1P43589 448 aa3.91□□□□□ -1.78
TRS120YDR407C YDR338CQ05497 695 aa3.91□□□□□ -1.78
TRS120YDR407C SNX3Q08826 162 aaKnown RBP3.91□□□□□ -1.78
TRS120YDR407C FAP7Q12055 197 aaPredicted RBP3.91□□□□□ -1.78
TRS120YDR407C GAL11P19659 1081 aa3.91□□□□□ -1.78
TRS120YDR407C NUT1P53114 1132 aa3.91□□□□□ -1.78
TRS120YDR407C TSR1Q07381 788 aaKnown RBP3.91□□□□□ -1.78
TRS120YDR407C GPN2Q08726 347 aaPredicted RBP3.91□□□□□ -1.78
TRS120YDR407C GIN4Q12263 1142 aa3.91□□□□□ -1.78
TRS120YDR407C AVL9Q12500 764 aa3.91□□□□□ -1.78
TRS120YDR407C NIP100P33420 868 aa3.91□□□□□ -1.78
TRS120YDR407C RPC25P35718 212 aa3.91□□□□□ -1.78
TRS120YDR407C SIP3P38717 1229 aa3.91□□□□□ -1.78
TRS120YDR407C KEL1P38853 1164 aaKnown RBP3.91□□□□□ -1.78
TRS120YDR407C LCP5P40079 357 aaPredicted RBP3.91□□□□□ -1.78
TRS120YDR407C PIP2P52960 996 aa3.91□□□□□ -1.78
TRS120YDR407C DSE4P53753 1117 aa3.91□□□□□ -1.78
TRS120YDR407C SEN54Q02825 467 aaPredicted RBP3.91□□□□□ -1.78
TRS120YDR407C URH1Q04179 340 aa3.91□□□□□ -1.78
TRS120YDR407C GIS4Q04233 774 aa3.91□□□□□ -1.78
TRS120YDR407C YMR018WQ04364 514 aa3.91□□□□□ -1.78
TRS120YDR407C ISA1Q07821 250 aaPredicted RBP3.91□□□□□ -1.78
TRS120YDR407C MEU1Q07938 337 aaKnown RBP RIP-Chip data3.91□□□□□ -1.78not detected
TRS120YDR407C MED1Q12321 566 aa3.91□□□□□ -1.78
TRS120YDR407C BI2P03873 423 aa3.9□□□□□ -1.78
TRS120YDR407C BI4P03879 638 aa3.9□□□□□ -1.78
TRS120YDR407C CDC37P06101 506 aaKnown RBP3.9□□□□□ -1.78
TRS120YDR407C RPL8BP29453 256 aaKnown RBP3.9□□□□□ -1.78
TRS120YDR407C YME1P32795 747 aa3.9□□□□□ -1.78
TRS120YDR407C FIS1P40515 155 aa3.9□□□□□ -1.78
TRS120YDR407C CBK1P53894 756 aa3.9□□□□□ -1.78
TRS120YDR407C PSR1Q07800 427 aa3.9□□□□□ -1.78
TRS120YDR407C CIR2Q08822 631 aa3.9□□□□□ -1.78
TRS120YDR407C YPL225WQ08971 146 aaKnown RBP3.9□□□□□ -1.78
TRS120YDR407C TAF10Q12030 206 aa3.9□□□□□ -1.78
TRS120YDR407C BI3Q9ZZW7 517 aa3.9□□□□□ -1.78
TRS120YDR407C PRE10P21242 288 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
TRS120YDR407C SWI3P32591 825 aa3.9□□□□□ -1.79
TRS120YDR407C NOP15P53927 220 aaPredicted RBP3.9□□□□□ -1.79
TRS120YDR407C OMS1Q06668 471 aa3.9□□□□□ -1.79
TRS120YDR407C YLR001CQ07895 862 aa3.9□□□□□ -1.79
TRS120YDR407C OSW1Q08692 278 aa3.9□□□□□ -1.79
TRS120YDR407C DEP1P31385 405 aa3.9□□□□□ -1.79
TRS120YDR407C TPS2P31688 896 aaKnown RBP3.9□□□□□ -1.79
TRS120YDR407C SEC8P32855 1065 aa3.9□□□□□ -1.79
TRS120YDR407C YPR078CQ06813 372 aa3.9□□□□□ -1.79
TRS120YDR407C GPM3Q12326 303 aa3.9□□□□□ -1.79
TRS120YDR407C RKM4Q12504 494 aa3.9□□□□□ -1.79
TRS120YDR407C YLR278CQ05854 1341 aa3.89□□□□□ -1.79
TRS120YDR407C PHO8P11491 566 aa3.89□□□□□ -1.79
TRS120YDR407C TCP1P12612 559 aaKnown RBP3.89□□□□□ -1.79
TRS120YDR407C ESS1P22696 170 aa3.89□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms