RNA–Protein interactions for RNA: YDR406W

PDR15, Transcript of Plasma membrane ATP binding cassette (ABC) transporter, yeast

Gene PDR15, Length 4,590 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDR15	YDR406W	PSO2	P30620	661 aa		4.98	□□□□□ -1.61
PDR15	YDR406W	YKL050C	P35736	922 aa		4.98	□□□□□ -1.61
PDR15	YDR406W	SLI15	P38283	698 aa		4.98	□□□□□ -1.61
PDR15	YDR406W	PEX8	P53248	589 aa		4.98	□□□□□ -1.61
PDR15	YDR406W	CBK1	P53894	756 aa		4.98	□□□□□ -1.61
PDR15	YDR406W	RKM4	Q12504	494 aa		4.98	□□□□□ -1.61
PDR15	YDR406W	RTG2	P32608	588 aa	Known RBP	4.98	□□□□□ -1.61
PDR15	YDR406W	NPL6	P32832	435 aa		4.98	□□□□□ -1.61
PDR15	YDR406W	PPG1	P32838	368 aa		4.98	□□□□□ -1.61
PDR15	YDR406W	MDR1	P53258	950 aa		4.98	□□□□□ -1.61
PDR15	YDR406W	RET3	P53600	189 aa		4.98	□□□□□ -1.61
PDR15	YDR406W	RCF1	Q03713	159 aa		4.98	□□□□□ -1.61
PDR15	YDR406W	GAS5	Q08193	484 aa		4.98	□□□□□ -1.61
PDR15	YDR406W	SMC5	Q08204	1093 aa		4.98	□□□□□ -1.61
PDR15	YDR406W	PUS1	Q12211	544 aa	Known RBP	4.98	□□□□□ -1.61
PDR15	YDR406W	ILV1	P00927	576 aa	Known RBP	4.98	□□□□□ -1.61
PDR15	YDR406W	CDC31	P06704	161 aa	Known RBP	4.98	□□□□□ -1.61
PDR15	YDR406W	NIP100	P33420	868 aa		4.98	□□□□□ -1.61
PDR15	YDR406W	SQS1	P53866	767 aa	Known RBP	4.98	□□□□□ -1.61
PDR15	YDR406W	UTP13	Q05946	817 aa	Known RBP	4.98	□□□□□ -1.61
PDR15	YDR406W	TMA16	Q08687	178 aa		4.98	□□□□□ -1.61
PDR15	YDR406W	TUS1	Q06412	1307 aa		4.98	□□□□□ -1.61
PDR15	YDR406W	MTF2	P10849	440 aa		4.97	□□□□□ -1.61
PDR15	YDR406W	SEC23	P15303	768 aa	Known RBP	4.97	□□□□□ -1.61
PDR15	YDR406W	PER1	P25625	357 aa		4.97	□□□□□ -1.61
PDR15	YDR406W	HIR1	P32479	840 aa		4.97	□□□□□ -1.61
PDR15	YDR406W	TFC4	P33339	1025 aa		4.97	□□□□□ -1.61
PDR15	YDR406W	EFM2	P38347	419 aa		4.97	□□□□□ -1.61
PDR15	YDR406W	BSD2	P38356	321 aa		4.97	□□□□□ -1.61
PDR15	YDR406W	BCD1	P38772	366 aa		4.97	□□□□□ -1.61
PDR15	YDR406W	SPC19	Q03954	165 aa		4.97	□□□□□ -1.61
PDR15	YDR406W	CKA2	P19454	339 aa		4.97	□□□□□ -1.61
PDR15	YDR406W	CHS3	P29465	1165 aa		4.97	□□□□□ -1.61
PDR15	YDR406W	UBP13	P38187	747 aa		4.97	□□□□□ -1.61
PDR15	YDR406W	SAK1	P38990	1142 aa		4.97	□□□□□ -1.61
PDR15	YDR406W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
PDR15	YDR406W	ZPR1	P53303	486 aa	Known RBP	4.97	□□□□□ -1.61
PDR15	YDR406W	ATG16	Q03818	150 aa		4.97	□□□□□ -1.61
PDR15	YDR406W	SPO75	Q07798	868 aa		4.97	□□□□□ -1.61
PDR15	YDR406W	YOR378W	Q08902	515 aa		4.97	□□□□□ -1.61
PDR15	YDR406W	HFI1	Q12060	488 aa		4.97	□□□□□ -1.61
PDR15	YDR406W	YET1	P35723	206 aa		4.97	□□□□□ -1.61
PDR15	YDR406W	YFL034W	P43564	1073 aa		4.97	□□□□□ -1.61
PDR15	YDR406W	ALT2	P52892	507 aa		4.97	□□□□□ -1.61
PDR15	YDR406W	MFM1	Q02783	413 aa		4.97	□□□□□ -1.61
PDR15	YDR406W	BUL2	Q03758	920 aa	Known RBP	4.97	□□□□□ -1.61
PDR15	YDR406W	PTC5	Q12511	572 aa		4.97	□□□□□ -1.61
PDR15	YDR406W	HAP4	P14064	554 aa		4.97	□□□□□ -1.61
PDR15	YDR406W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
PDR15	YDR406W	ASE1	P50275	885 aa		4.97	□□□□□ -1.61
PDR15	YDR406W	OCA1	P50946	238 aa	Predicted RBP	4.97	□□□□□ -1.61
PDR15	YDR406W	RRT6	P53117	311 aa	Predicted RBP	4.97	□□□□□ -1.61
PDR15	YDR406W	EBS1	Q03466	884 aa	Known RBP	4.97	□□□□□ -1.61
PDR15	YDR406W	YPL191C	Q08930	360 aa		4.97	□□□□□ -1.61
PDR15	YDR406W	OXR1	Q08952	273 aa		4.97	□□□□□ -1.61
PDR15	YDR406W	TAF10	Q12030	206 aa		4.97	□□□□□ -1.61
PDR15	YDR406W	WHI5	Q12416	295 aa		4.97	□□□□□ -1.61
PDR15	YDR406W	CBP1	P07252	654 aa		4.96	□□□□□ -1.61
PDR15	YDR406W	AFT1	P22149	690 aa		4.96	□□□□□ -1.61
PDR15	YDR406W	MTC2	P34246	357 aa		4.96	□□□□□ -1.61
PDR15	YDR406W	JNM1	P36224	373 aa		4.96	□□□□□ -1.61
PDR15	YDR406W	RPN3	P40016	523 aa	Known RBP	4.96	□□□□□ -1.61
PDR15	YDR406W	HMF1	P40037	129 aa	Known RBP	4.96	□□□□□ -1.61
PDR15	YDR406W	RRD1	P40454	393 aa	Known RBP	4.96	□□□□□ -1.61
PDR15	YDR406W	PRP31	P49704	494 aa	Predicted RBP	4.96	□□□□□ -1.61
PDR15	YDR406W	YGR237C	P50089	785 aa		4.96	□□□□□ -1.61
PDR15	YDR406W	NSG2	P53898	299 aa		4.96	□□□□□ -1.61
PDR15	YDR406W	YLL058W	Q12198	575 aa		4.96	□□□□□ -1.61
PDR15	YDR406W	SAM2	P19358	384 aa	Known RBP	4.96	□□□□□ -1.62
PDR15	YDR406W	PPS1	P38148	807 aa		4.96	□□□□□ -1.62
PDR15	YDR406W	AIM21	P40563	679 aa		4.96	□□□□□ -1.62
PDR15	YDR406W	YGR273C	P53329	174 aa		4.96	□□□□□ -1.62
PDR15	YDR406W	AIM33	Q04516	312 aa		4.96	□□□□□ -1.62
PDR15	YDR406W	YSH1	Q06224	779 aa	Predicted RBP	4.96	□□□□□ -1.62
PDR15	YDR406W	UTP4	Q06679	776 aa	Known RBP	4.96	□□□□□ -1.62
PDR15	YDR406W	YAP7	Q08182	245 aa		4.96	□□□□□ -1.62
PDR15	YDR406W	CDC19	P00549	500 aa	Known RBP	4.96	□□□□□ -1.62
PDR15	YDR406W	TOM70	P07213	617 aa	Known RBP	4.96	□□□□□ -1.62
PDR15	YDR406W	LTV1	P34078	463 aa		4.96	□□□□□ -1.62
PDR15	YDR406W	PET10	P36139	283 aa		4.96	□□□□□ -1.62
PDR15	YDR406W	APE4	P38821	490 aa		4.96	□□□□□ -1.62
PDR15	YDR406W	YHR219W	P38900	624 aa		4.96	□□□□□ -1.62
PDR15	YDR406W	YAP5	P40574	245 aa		4.96	□□□□□ -1.62
PDR15	YDR406W	SAP185	P40856	1058 aa		4.96	□□□□□ -1.62
PDR15	YDR406W	DAK2	P43550	591 aa		4.96	□□□□□ -1.62
PDR15	YDR406W	OYE2	Q03558	400 aa	Known RBP	4.96	□□□□□ -1.62
PDR15	YDR406W	SPO20	Q04359	397 aa		4.96	□□□□□ -1.62
PDR15	YDR406W	TY3A-G	Q12173	290 aa		4.96	□□□□□ -1.62
PDR15	YDR406W	MNL2	Q12205	849 aa		4.96	□□□□□ -1.62
PDR15	YDR406W	YEL077C	Q3E7X8	1277 aa		4.96	□□□□□ -1.62
PDR15	YDR406W	TY3A-I	Q99219	290 aa		4.96	□□□□□ -1.62
PDR15	YDR406W	HPR1	P17629	752 aa	Known RBP	4.96	□□□□□ -1.62
PDR15	YDR406W	SKG6	P32900	734 aa	Predicted RBP	4.96	□□□□□ -1.62
PDR15	YDR406W	PSY4	P38193	441 aa		4.96	□□□□□ -1.62
PDR15	YDR406W	REI1	P38344	393 aa	Predicted RBP	4.96	□□□□□ -1.62
PDR15	YDR406W	SUL1	P38359	859 aa		4.96	□□□□□ -1.62
PDR15	YDR406W	RTT107	P38850	1070 aa		4.96	□□□□□ -1.62
PDR15	YDR406W	NIT1	P40447	199 aa		4.96	□□□□□ -1.62
PDR15	YDR406W	CIT3	P43635	486 aa		4.96	□□□□□ -1.62
PDR15	YDR406W	TOS3	P43637	560 aa		4.96	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms