RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C MER1P16523 270 aa4.8□□□□□ -1.64
PRP28YDR243C RDS2P19541 446 aaKnown RBP4.8□□□□□ -1.64
PRP28YDR243C IME1P21190 360 aa4.8□□□□□ -1.64
PRP28YDR243C BMH1P29311 267 aaKnown RBP4.8□□□□□ -1.64
PRP28YDR243C MGM1P32266 881 aa4.8□□□□□ -1.64
PRP28YDR243C RTG2P32608 588 aaKnown RBP4.8□□□□□ -1.64
PRP28YDR243C NPL6P32832 435 aa4.8□□□□□ -1.64
PRP28YDR243C SEG2P34250 1132 aa4.8□□□□□ -1.64
PRP28YDR243C YKL222CP35995 705 aa4.8□□□□□ -1.64
PRP28YDR243C APL2P36000 726 aaPredicted RBP4.8□□□□□ -1.64
PRP28YDR243C TRZ1P36159 838 aaPredicted RBP4.8□□□□□ -1.64
PRP28YDR243C YRO2P38079 344 aa4.8□□□□□ -1.64
PRP28YDR243C IFA38P38286 347 aa4.8□□□□□ -1.64
PRP28YDR243C YHR020WP38708 688 aaKnown RBP4.8□□□□□ -1.64
PRP28YDR243C VID27P40157 782 aa4.8□□□□□ -1.64
PRP28YDR243C YIR007WP40566 764 aa4.8□□□□□ -1.64
PRP28YDR243C CTH1P47976 325 aa4.8□□□□□ -1.64
PRP28YDR243C GPI8P49018 411 aa4.8□□□□□ -1.64
PRP28YDR243C SCW11P53189 542 aa4.8□□□□□ -1.64
PRP28YDR243C RAT1Q02792 1006 aaKnown RBP4.8□□□□□ -1.64
PRP28YDR243C ISU1Q03020 165 aa4.8□□□□□ -1.64
PRP28YDR243C ARV1Q06541 321 aa4.8□□□□□ -1.64
PRP28YDR243C MCP2Q06567 569 aa4.8□□□□□ -1.64
PRP28YDR243C CSR1Q06705 408 aaKnown RBP4.8□□□□□ -1.64
PRP28YDR243C OSH2Q12451 1283 aa4.8□□□□□ -1.64
PRP28YDR243C YIL002W-AQ3E7Z5 69 aa4.8□□□□□ -1.64
PRP28YDR243C ATG2P53855 1592 aa4.8□□□□□ -1.64
PRP28YDR243C GDB1Q06625 1536 aa4.79□□□□□ -1.64
PRP28YDR243C KOG1P38873 1557 aa4.79□□□□□ -1.64
PRP28YDR243C TEF1P02994 458 aaKnown RBP4.79□□□□□ -1.64
PRP28YDR243C OCA4P25366 362 aa4.79□□□□□ -1.64
PRP28YDR243C RAD5P32849 1169 aaPredicted RBP4.79□□□□□ -1.64
PRP28YDR243C BUD2P33314 1104 aa4.79□□□□□ -1.64
PRP28YDR243C MEF2P39677 819 aa4.79□□□□□ -1.64
PRP28YDR243C YIL092WP40497 633 aa4.79□□□□□ -1.64
PRP28YDR243C RPL34BP40525 121 aaKnown RBP4.79□□□□□ -1.64
PRP28YDR243C AAD14P42884 376 aa4.79□□□□□ -1.64
PRP28YDR243C HOP2P53187 214 aa4.79□□□□□ -1.64
PRP28YDR243C UTP22P53254 1237 aaPredicted RBP4.79□□□□□ -1.64
PRP28YDR243C SPO71Q03868 1245 aa4.79□□□□□ -1.64
PRP28YDR243C RBA50Q04418 439 aa4.79□□□□□ -1.64
PRP28YDR243C HPF1Q05164 967 aa4.79□□□□□ -1.64
PRP28YDR243C DCS1Q06151 350 aa4.79□□□□□ -1.64
PRP28YDR243C YOR223WQ12015 292 aa4.79□□□□□ -1.64
PRP28YDR243C RTC5Q12108 567 aaKnown RBP4.79□□□□□ -1.64
PRP28YDR243C TY1A-BLQ12266 440 aa4.79□□□□□ -1.64
PRP28YDR243C PSK1P31374 1356 aa4.79□□□□□ -1.64
PRP28YDR243C ENO1P00924 437 aaKnown RBP4.78□□□□□ -1.64
PRP28YDR243C RPS3P05750 240 aaKnown RBP4.78□□□□□ -1.64
PRP28YDR243C ARG82P07250 355 aa4.78□□□□□ -1.64
PRP28YDR243C YML002WP0CF17 737 aa4.78□□□□□ -1.64
PRP28YDR243C BIK1P11709 440 aa4.78□□□□□ -1.64
PRP28YDR243C MIP1P15801 1254 aa4.78□□□□□ -1.64
PRP28YDR243C PWP2P25635 923 aaKnown RBP4.78□□□□□ -1.64
PRP28YDR243C VPH2P32341 215 aa4.78□□□□□ -1.64
PRP28YDR243C SSO1P32867 290 aa4.78□□□□□ -1.64
PRP28YDR243C SLA2P33338 968 aa4.78□□□□□ -1.64
PRP28YDR243C STE13P33894 931 aa4.78□□□□□ -1.64
PRP28YDR243C OCT1P35999 772 aa4.78□□□□□ -1.64
PRP28YDR243C FZO1P38297 855 aa4.78□□□□□ -1.64
PRP28YDR243C YHL012WP38709 493 aa4.78□□□□□ -1.64
PRP28YDR243C HAL5P38970 855 aaKnown RBP4.78□□□□□ -1.64
PRP28YDR243C CAJ1P39101 391 aa4.78□□□□□ -1.64
PRP28YDR243C VPS8P39702 1274 aa4.78□□□□□ -1.64
PRP28YDR243C ESL1P40456 1118 aa4.78□□□□□ -1.64
PRP28YDR243C FYV8P46949 817 aaKnown RBP4.78□□□□□ -1.64
PRP28YDR243C ARI1P53111 347 aaKnown RBP4.78□□□□□ -1.64
PRP28YDR243C SFB2P53953 876 aa4.78□□□□□ -1.64
PRP28YDR243C RCM1P53972 490 aa4.78□□□□□ -1.64
PRP28YDR243C YML020WQ03722 664 aa4.78□□□□□ -1.64
PRP28YDR243C PHM6Q05637 104 aa4.78□□□□□ -1.64
PRP28YDR243C ISR1Q06098 443 aaKnown RBP4.78□□□□□ -1.64
PRP28YDR243C RTT10Q08924 1013 aa4.78□□□□□ -1.64
PRP28YDR243C YPL277CQ08989 487 aa4.78□□□□□ -1.64
PRP28YDR243C ACF2Q12168 779 aa4.78□□□□□ -1.64
PRP28YDR243C ERP4Q12450 207 aa4.78□□□□□ -1.64
PRP28YDR243C TCB1Q12466 1186 aa4.78□□□□□ -1.64
PRP28YDR243C YBL111CQ3E7Y5 667 aa4.78□□□□□ -1.64
PRP28YDR243C CYB2P00175 591 aa4.78□□□□□ -1.64
PRP28YDR243C PGK1P00560 416 aaKnown RBP4.78□□□□□ -1.64
PRP28YDR243C ATE1P16639 503 aa4.78□□□□□ -1.64
PRP28YDR243C HCA4P20448 770 aaKnown RBP4.78□□□□□ -1.64
PRP28YDR243C ARG1P22768 420 aa4.78□□□□□ -1.64
PRP28YDR243C ECM32P32644 1121 aaKnown RBP4.78□□□□□ -1.64
PRP28YDR243C PTR2P32901 601 aa4.78□□□□□ -1.64
PRP28YDR243C DBP7P36120 742 aaKnown RBP4.78□□□□□ -1.64
PRP28YDR243C UGA2P38067 497 aa4.78□□□□□ -1.64
PRP28YDR243C PPX1P38698 397 aa4.78□□□□□ -1.64
PRP28YDR243C OTU2P38747 307 aaKnown RBP4.78□□□□□ -1.64
PRP28YDR243C TDA11P38854 504 aa4.78□□□□□ -1.64
PRP28YDR243C GVP36P40531 326 aaKnown RBP4.78□□□□□ -1.64
PRP28YDR243C SSN8P47821 323 aa4.78□□□□□ -1.64
PRP28YDR243C SRB7P47822 140 aa4.78□□□□□ -1.64
PRP28YDR243C FMS1P50264 508 aa4.78□□□□□ -1.64
PRP28YDR243C MON1P53129 644 aa4.78□□□□□ -1.64
PRP28YDR243C MPS2P53159 387 aa4.78□□□□□ -1.64
PRP28YDR243C CEG1Q01159 459 aaPredicted RBP4.78□□□□□ -1.64
PRP28YDR243C TFB2Q02939 513 aa4.78□□□□□ -1.64
PRP28YDR243C SYF1Q04048 859 aaPredicted RBP4.78□□□□□ -1.64
PRP28YDR243C BDS1Q08347 646 aa4.78□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms