RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeastyeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH5YDL154W MMM1P41800 426 aa2.32□□□□□ -2.04
MSH5YDL154W FOL2P51601 243 aaKnown RBP2.32□□□□□ -2.04
MSH5YDL154W HOS3Q02959 697 aaKnown RBP2.32□□□□□ -2.04
MSH5YDL154W YPL066WQ12194 479 aa2.32□□□□□ -2.04
MSH5YDL154W AI3P03877 415 aa2.32□□□□□ -2.04
MSH5YDL154W YSC84P32793 468 aa2.32□□□□□ -2.04
MSH5YDL154W MXR1P40029 184 aa2.32□□□□□ -2.04
MSH5YDL154W DOS2P54858 310 aa2.32□□□□□ -2.04
MSH5YDL154W UTP14Q04500 899 aaKnown RBP2.32□□□□□ -2.04
MSH5YDL154W PHM7Q12252 991 aa2.32□□□□□ -2.04
MSH5YDL154W YPR071WQ12346 211 aa2.32□□□□□ -2.04
MSH5YDL154W CAT8P39113 1433 aa2.32□□□□□ -2.04
MSH5YDL154W VMR1P38735 1592 aa2.31□□□□□ -2.04
MSH5YDL154W MDJ1P35191 511 aa2.31□□□□□ -2.04
MSH5YDL154W TAT2P38967 592 aa2.31□□□□□ -2.04
MSH5YDL154W DSS1P39112 969 aa2.31□□□□□ -2.04
MSH5YDL154W BUD6P41697 788 aa2.31□□□□□ -2.04
MSH5YDL154W CIT3P43635 486 aa2.31□□□□□ -2.04
MSH5YDL154W HSV2P50079 448 aaPredicted RBP2.31□□□□□ -2.04
MSH5YDL154W ARI1P53111 347 aaKnown RBP2.31□□□□□ -2.04
MSH5YDL154W RCM1P53972 490 aa2.31□□□□□ -2.04
MSH5YDL154W YPR196WQ06595 470 aa2.31□□□□□ -2.04
MSH5YDL154W ACM1Q08981 209 aa2.31□□□□□ -2.04
MSH5YDL154W SRB8P25648 1427 aa2.31□□□□□ -2.04
MSH5YDL154W YMR084WA2P2R3 262 aa2.31□□□□□ -2.04
MSH5YDL154W RPL11AP0C0W9 174 aaKnown RBP2.31□□□□□ -2.04
MSH5YDL154W GSY1P23337 708 aa2.31□□□□□ -2.04
MSH5YDL154W NAM7P30771 971 aaKnown RBP2.31□□□□□ -2.04
MSH5YDL154W YHR020WP38708 688 aaKnown RBP2.31□□□□□ -2.04
MSH5YDL154W PNT1P38969 423 aa2.31□□□□□ -2.04
MSH5YDL154W RPN3P40016 523 aaKnown RBP2.31□□□□□ -2.04
MSH5YDL154W SIP5P40210 489 aaKnown RBP2.31□□□□□ -2.04
MSH5YDL154W PFD1P46988 109 aa2.31□□□□□ -2.04
MSH5YDL154W ALT1P52893 592 aa2.31□□□□□ -2.04
MSH5YDL154W RPL11BQ3E757 174 aaPredicted RBP2.31□□□□□ -2.04
MSH5YDL154W SRM1P21827 482 aa2.3□□□□□ -2.04
MSH5YDL154W AIM26P32858 118 aa2.3□□□□□ -2.04
MSH5YDL154W ETP1P38748 585 aaKnown RBP2.3□□□□□ -2.04
MSH5YDL154W GUS1P46655 708 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
MSH5YDL154W RTA1P53047 317 aa2.3□□□□□ -2.04
MSH5YDL154W NPL3Q01560 414 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
MSH5YDL154W TAF8Q03750 510 aa2.3□□□□□ -2.04
MSH5YDL154W YOR059CQ08448 450 aaKnown RBP2.3□□□□□ -2.04
MSH5YDL154W HBN1Q96VH4 193 aa2.3□□□□□ -2.04
MSH5YDL154W MSB1P21339 1137 aaKnown RBP2.3□□□□□ -2.04
MSH5YDL154W MDL2P33311 773 aa2.3□□□□□ -2.04
MSH5YDL154W PUF3Q07807 879 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
MSH5YDL154W PPM2Q08282 695 aa2.3□□□□□ -2.04
MSH5YDL154W YDR215CQ12240 137 aa2.3□□□□□ -2.04
MSH5YDL154W TY2B-LR1P0C2J3 1770 aa2.3□□□□□ -2.04
MSH5YDL154W TY2B-FP0CX63 1770 aa2.3□□□□□ -2.04
MSH5YDL154W TY2B-GR2P0CX64 1770 aa2.3□□□□□ -2.04
MSH5YDL154W TY2B-CP25384 1770 aa2.3□□□□□ -2.04
MSH5YDL154W TY2B-DR2Q03494 1770 aa2.3□□□□□ -2.04
MSH5YDL154W TY1B-DR1Q03855 1755 aa2.3□□□□□ -2.04
MSH5YDL154W TY2B-DR3Q07791 1770 aaKnown RBP2.3□□□□□ -2.04
MSH5YDL154W TY2B-OR1Q12113 1770 aa2.3□□□□□ -2.04
MSH5YDL154W TY2B-DR1Q12472 1770 aa2.3□□□□□ -2.04
MSH5YDL154W TY2B-OR2Q12501 1770 aa2.3□□□□□ -2.04
MSH5YDL154W YBT1P32386 1661 aa2.29□□□□□ -2.04
MSH5YDL154W PHR1P05066 565 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
MSH5YDL154W CHS2P14180 963 aa2.29□□□□□ -2.04
MSH5YDL154W MSD1P15179 658 aaKnown RBP2.29□□□□□ -2.04
MSH5YDL154W TSR4P25040 408 aa2.29□□□□□ -2.04
MSH5YDL154W SAF1P38352 637 aa2.29□□□□□ -2.04
MSH5YDL154W PIK1P39104 1066 aa2.29□□□□□ -2.04
MSH5YDL154W SLN1P39928 1220 aaPredicted RBP2.29□□□□□ -2.04
MSH5YDL154W GTS1P40956 396 aa2.29□□□□□ -2.04
MSH5YDL154W NIT3P49954 291 aa2.29□□□□□ -2.04
MSH5YDL154W VPS30Q02948 557 aa2.29□□□□□ -2.04
MSH5YDL154W YOR352WQ08816 343 aa2.29□□□□□ -2.04
MSH5YDL154W GSC2P40989 1895 aa2.29□□□□□ -2.04
MSH5YDL154W RFA1P22336 621 aaKnown RBP2.29□□□□□ -2.04
MSH5YDL154W SRO9P25567 434 aaKnown RBP2.29□□□□□ -2.04
MSH5YDL154W PEX6P33760 1030 aa2.29□□□□□ -2.04
MSH5YDL154W GDH3P39708 457 aa2.29□□□□□ -2.04
MSH5YDL154W HLJ1P48353 224 aa2.29□□□□□ -2.04
MSH5YDL154W LCD1Q04377 747 aa2.29□□□□□ -2.04
MSH5YDL154W OSW2Q12202 724 aa2.29□□□□□ -2.04
MSH5YDL154W YVC1Q12324 675 aa2.29□□□□□ -2.04
MSH5YDL154W ADR1P07248 1323 aa2.29□□□□□ -2.04
MSH5YDL154W BUD3P25558 1636 aa2.29□□□□□ -2.04
MSH5YDL154W TOP3P13099 656 aa2.28□□□□□ -2.04
MSH5YDL154W RAD53P22216 821 aa2.28□□□□□ -2.04
MSH5YDL154W MSH2P25847 964 aa2.28□□□□□ -2.04
MSH5YDL154W KAE1P36132 386 aa2.28□□□□□ -2.04
MSH5YDL154W PET10P36139 283 aa2.28□□□□□ -2.04
MSH5YDL154W BET3P36149 193 aa2.28□□□□□ -2.04
MSH5YDL154W PTC7P38797 343 aa2.28□□□□□ -2.04
MSH5YDL154W YER158CP40095 573 aa2.28□□□□□ -2.04
MSH5YDL154W YFL066CP43538 392 aa2.28□□□□□ -2.04
MSH5YDL154W UBP6P43593 499 aaKnown RBP2.28□□□□□ -2.04
MSH5YDL154W ALG2P43636 503 aa2.28□□□□□ -2.04
MSH5YDL154W CCM1P48237 864 aaPredicted RBP2.28□□□□□ -2.04
MSH5YDL154W MAK10Q02197 733 aa2.28□□□□□ -2.04
MSH5YDL154W HRQ1Q05549 1077 aa2.28□□□□□ -2.04
MSH5YDL154W NTG2Q08214 380 aa2.28□□□□□ -2.04
MSH5YDL154W SVS1Q12254 260 aa2.28□□□□□ -2.04
MSH5YDL154W RPS9AO13516 197 aaKnown RBP2.28□□□□□ -2.04
MSH5YDL154W BI4P03879 638 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 1572.7 ms