RNA–Protein interactions for RNA: YDL108W

KIN28, Transcript of Serine/threonine protein kinase, subunit of transcription factor TFIIH, yeastyeast

Gene KIN28, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KIN28YDL108W BUD6P41697 788 aa5.54□□□□□ -1.52
KIN28YDL108W ESF2P53743 316 aaKnown RBP5.54□□□□□ -1.52
KIN28YDL108W DNM1P54861 757 aa5.54□□□□□ -1.52
KIN28YDL108W POB3Q04636 552 aaKnown RBP5.54□□□□□ -1.52
KIN28YDL108W MED7Q08278 222 aa5.54□□□□□ -1.52
KIN28YDL108W TRP3P00937 484 aa5.53□□□□□ -1.52
KIN28YDL108W CAN1P04817 590 aa5.53□□□□□ -1.52
KIN28YDL108W ADP1P25371 1049 aa5.53□□□□□ -1.52
KIN28YDL108W HBS1P32769 611 aaKnown RBP5.53□□□□□ -1.52
KIN28YDL108W TIM23P32897 222 aa5.53□□□□□ -1.52
KIN28YDL108W TOS1P38288 455 aa5.53□□□□□ -1.52
KIN28YDL108W NUP82P40368 713 aa5.53□□□□□ -1.52
KIN28YDL108W AVT1P47082 602 aa5.53□□□□□ -1.52
KIN28YDL108W SSY1Q03770 852 aa5.53□□□□□ -1.52
KIN28YDL108W PPM2Q08282 695 aa5.53□□□□□ -1.52
KIN28YDL108W BI4P03879 638 aa5.52□□□□□ -1.53
KIN28YDL108W SPS1P08458 490 aa5.52□□□□□ -1.53
KIN28YDL108W RPN12P32496 274 aa5.52□□□□□ -1.53
KIN28YDL108W ALG12P53730 551 aa5.52□□□□□ -1.53
KIN28YDL108W SDH1Q00711 640 aa5.52□□□□□ -1.53
KIN28YDL108W CEF1Q03654 590 aaPredicted RBP5.52□□□□□ -1.53
KIN28YDL108W TAF8Q03750 510 aa5.52□□□□□ -1.53
KIN28YDL108W HRQ1Q05549 1077 aa5.52□□□□□ -1.53
KIN28YDL108W YLR125WQ12138 136 aa5.52□□□□□ -1.53
KIN28YDL108W HSP82P02829 709 aaKnown RBP5.51□□□□□ -1.53
KIN28YDL108W ADE8P04161 214 aa5.51□□□□□ -1.53
KIN28YDL108W CDC12P32468 407 aaKnown RBP5.51□□□□□ -1.53
KIN28YDL108W YKR073CP36153 106 aa5.51□□□□□ -1.53
KIN28YDL108W YBR284WP38150 797 aa5.51□□□□□ -1.53
KIN28YDL108W FOL2P51601 243 aaKnown RBP5.51□□□□□ -1.53
KIN28YDL108W NKP1Q12493 238 aa5.51□□□□□ -1.53
KIN28YDL108W TOM70P07213 617 aaKnown RBP5.5□□□□□ -1.53
KIN28YDL108W PHO8P11491 566 aa5.5□□□□□ -1.53
KIN28YDL108W YRO2P38079 344 aa5.5□□□□□ -1.53
KIN28YDL108W SIT1P39980 628 aa5.5□□□□□ -1.53
KIN28YDL108W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.5□□□□□ -1.53not detected
KIN28YDL108W SVS1Q12254 260 aa5.5□□□□□ -1.53
KIN28YDL108W HBN1Q96VH4 193 aa5.5□□□□□ -1.53
KIN28YDL108W ERR1P0CX10 437 aa5.49□□□□□ -1.53
KIN28YDL108W ERR2P0CX11 437 aa5.49□□□□□ -1.53
KIN28YDL108W ACE2P21192 770 aa5.49□□□□□ -1.53
KIN28YDL108W TRX2P22803 104 aaKnown RBP5.49□□□□□ -1.53
KIN28YDL108W TFC3P34111 1160 aa5.49□□□□□ -1.53
KIN28YDL108W RRT14P40470 206 aa5.49□□□□□ -1.53
KIN28YDL108W RTA1P53047 317 aa5.49□□□□□ -1.53
KIN28YDL108W MDM38Q08179 573 aa5.49□□□□□ -1.53
KIN28YDL108W YLL058WQ12198 575 aa5.49□□□□□ -1.53
KIN28YDL108W YPR071WQ12346 211 aa5.49□□□□□ -1.53
KIN28YDL108W YGR161W-CQ3E744 92 aa5.49□□□□□ -1.53
KIN28YDL108W MET6P05694 767 aaKnown RBP5.48□□□□□ -1.53
KIN28YDL108W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
KIN28YDL108W PWP2P25635 923 aaKnown RBP5.48□□□□□ -1.53
KIN28YDL108W DPB3P27344 201 aa5.48□□□□□ -1.53
KIN28YDL108W GRX4P32642 244 aa5.48□□□□□ -1.53
KIN28YDL108W SEC6P32844 805 aa5.48□□□□□ -1.53
KIN28YDL108W LIP5P32875 414 aa5.48□□□□□ -1.53
KIN28YDL108W YKL151CP36059 337 aa5.48□□□□□ -1.53
KIN28YDL108W BET3P36149 193 aa5.48□□□□□ -1.53
KIN28YDL108W RFC5P38251 354 aa5.48□□□□□ -1.53
KIN28YDL108W SEC26P41810 973 aaKnown RBP5.48□□□□□ -1.53
KIN28YDL108W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
KIN28YDL108W LCD1Q04377 747 aa5.48□□□□□ -1.53
KIN28YDL108W ATG13Q06628 738 aa5.48□□□□□ -1.53
KIN28YDL108W TOP3P13099 656 aa5.47□□□□□ -1.53
KIN28YDL108W MSD1P15179 658 aaKnown RBP5.47□□□□□ -1.53
KIN28YDL108W THI4P32318 326 aa5.47□□□□□ -1.53
KIN28YDL108W DOM34P33309 386 aa5.47□□□□□ -1.53
KIN28YDL108W PET10P36139 283 aa5.47□□□□□ -1.53
KIN28YDL108W MAL31P38156 614 aa5.47□□□□□ -1.53
KIN28YDL108W HSC82P15108 705 aaKnown RBP5.46□□□□□ -1.54
KIN28YDL108W HSP78P33416 811 aa5.46□□□□□ -1.54
KIN28YDL108W MDM1Q01846 1127 aa5.46□□□□□ -1.54
KIN28YDL108W SRT1Q03175 343 aa5.46□□□□□ -1.54
KIN28YDL108W VMS1Q04311 632 aaKnown RBP5.46□□□□□ -1.54
KIN28YDL108W BRE4Q07660 1125 aa5.46□□□□□ -1.54
KIN28YDL108W OSW2Q12202 724 aa5.46□□□□□ -1.54
KIN28YDL108W LPX1Q12405 387 aaKnown RBP5.46□□□□□ -1.54
KIN28YDL108W KIN2P13186 1147 aaKnown RBP5.45□□□□□ -1.54
KIN28YDL108W NPP1P25353 742 aa5.45□□□□□ -1.54
KIN28YDL108W APL1P27351 700 aa5.45□□□□□ -1.54
KIN28YDL108W FUN30P31380 1131 aa5.45□□□□□ -1.54
KIN28YDL108W PUB1P32588 453 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
KIN28YDL108W SWI3P32591 825 aa5.45□□□□□ -1.54
KIN28YDL108W GIC1P38785 314 aa5.45□□□□□ -1.54
KIN28YDL108W YER158CP40095 573 aa5.45□□□□□ -1.54
KIN28YDL108W UBP6P43593 499 aaKnown RBP5.45□□□□□ -1.54
KIN28YDL108W CCM1P48237 864 aaPredicted RBP5.45□□□□□ -1.54
KIN28YDL108W HFM1P51979 1187 aa5.45□□□□□ -1.54
KIN28YDL108W ENV11P53246 860 aa5.45□□□□□ -1.54
KIN28YDL108W RSM24Q03976 319 aa5.45□□□□□ -1.54
KIN28YDL108W YPR196WQ06595 470 aa5.45□□□□□ -1.54
KIN28YDL108W SNU66Q12420 587 aaPredicted RBP5.45□□□□□ -1.54
KIN28YDL108W AFR1P33304 620 aa5.44□□□□□ -1.54
KIN28YDL108W REC104P33323 182 aa5.44□□□□□ -1.54
KIN28YDL108W YKR078WP36158 585 aaKnown RBP5.44□□□□□ -1.54
KIN28YDL108W ERT1P38140 529 aa5.44□□□□□ -1.54
KIN28YDL108W FUI1P38196 639 aa5.44□□□□□ -1.54
KIN28YDL108W TOK1P40310 691 aa5.44□□□□□ -1.54
KIN28YDL108W GYP7P48365 746 aa5.44□□□□□ -1.54
KIN28YDL108W HSV2P50079 448 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms