RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHC1	YBR235W	YER034W	P40022	185 aa	Known RBP	4.93	□□□□□ -1.62
VHC1	YBR235W	YTA12	P40341	825 aa		4.93	□□□□□ -1.62
VHC1	YBR235W	YCG1	Q06680	1035 aa		4.93	□□□□□ -1.62
VHC1	YBR235W	NSE1	Q07913	336 aa		4.93	□□□□□ -1.62
VHC1	YBR235W	ALR1	Q08269	859 aa		4.93	□□□□□ -1.62
VHC1	YBR235W	ACF2	Q12168	779 aa		4.93	□□□□□ -1.62
VHC1	YBR235W	PDC1	P06169	563 aa	Known RBP	4.92	□□□□□ -1.62
VHC1	YBR235W	RPL19A	P0CX82	189 aa	Known RBP	4.92	□□□□□ -1.62
VHC1	YBR235W	RPL19B	P0CX83	189 aa	Predicted RBP	4.92	□□□□□ -1.62
VHC1	YBR235W	REC107	P21651	314 aa		4.92	□□□□□ -1.62
VHC1	YBR235W	UTP11	P34247	250 aa	Predicted RBP	4.92	□□□□□ -1.62
VHC1	YBR235W	MIA40	P36046	403 aa		4.92	□□□□□ -1.62
VHC1	YBR235W	RRM3	P38766	723 aa		4.92	□□□□□ -1.62
VHC1	YBR235W	MET12	P46151	657 aa		4.92	□□□□□ -1.62
VHC1	YBR235W	MDE1	P47095	244 aa		4.92	□□□□□ -1.62
VHC1	YBR235W	KEL2	P50090	882 aa		4.92	□□□□□ -1.62
VHC1	YBR235W	RTT109	Q07794	436 aa		4.92	□□□□□ -1.62
VHC1	YBR235W	MSH5	Q12175	901 aa		4.92	□□□□□ -1.62
VHC1	YBR235W	YAP1	P19880	650 aa	Known RBP	4.92	□□□□□ -1.62
VHC1	YBR235W	MEF1	P25039	761 aa		4.92	□□□□□ -1.62
VHC1	YBR235W	SMI1	P32566	505 aa		4.92	□□□□□ -1.62
VHC1	YBR235W	VPS21	P36017	210 aa	Known RBP	4.92	□□□□□ -1.62
VHC1	YBR235W	DBP7	P36120	742 aa	Known RBP	4.92	□□□□□ -1.62
VHC1	YBR235W	SMF1	P38925	575 aa		4.92	□□□□□ -1.62
VHC1	YBR235W	MEF2	P39677	819 aa		4.92	□□□□□ -1.62
VHC1	YBR235W	EDC3	P39998	551 aa	Known RBP	4.92	□□□□□ -1.62
VHC1	YBR235W	YTA6	P40328	754 aa		4.92	□□□□□ -1.62
VHC1	YBR235W	PHB1	P40961	287 aa		4.92	□□□□□ -1.62
VHC1	YBR235W	FAP7	Q12055	197 aa	Predicted RBP	4.92	□□□□□ -1.62
VHC1	YBR235W	YOR1	P53049	1477 aa		4.92	□□□□□ -1.62
VHC1	YBR235W	RPB4	P20433	221 aa	Predicted RBP	4.91	□□□□□ -1.62
VHC1	YBR235W	TSR4	P25040	408 aa		4.91	□□□□□ -1.62
VHC1	YBR235W	PYC2	P32327	1180 aa	Known RBP	4.91	□□□□□ -1.62
VHC1	YBR235W	FES1	P38260	290 aa		4.91	□□□□□ -1.62
VHC1	YBR235W	BRO1	P48582	844 aa		4.91	□□□□□ -1.62
VHC1	YBR235W	TMA46	Q12000	345 aa	Known RBP	4.91	□□□□□ -1.62
VHC1	YBR235W	RAV1	P47104	1357 aa		4.91	□□□□□ -1.62
VHC1	YBR235W	ARO1	P08566	1588 aa	Known RBP	4.91	□□□□□ -1.62
VHC1	YBR235W	POL30	P15873	258 aa	Known RBP	4.91	□□□□□ -1.62
VHC1	YBR235W	VPS1	P21576	704 aa	Known RBP	4.91	□□□□□ -1.62
VHC1	YBR235W	LCB1	P25045	558 aa	Known RBP	4.91	□□□□□ -1.62
VHC1	YBR235W	PHO84	P25297	587 aa	Known RBP	4.91	□□□□□ -1.62
VHC1	YBR235W	PSY4	P38193	441 aa		4.91	□□□□□ -1.62
VHC1	YBR235W	YBR062C	P38239	180 aa		4.91	□□□□□ -1.62
VHC1	YBR235W	PIK1	P39104	1066 aa		4.91	□□□□□ -1.62
VHC1	YBR235W	GEM1	P39722	662 aa		4.91	□□□□□ -1.62
VHC1	YBR235W	AVT6	P40074	448 aa		4.91	□□□□□ -1.62
VHC1	YBR235W	IRR1	P40541	1150 aa		4.91	□□□□□ -1.62
VHC1	YBR235W	HEF3	P53978	1044 aa	Known RBP	4.91	□□□□□ -1.62
VHC1	YBR235W	RMD1	Q03441	430 aa		4.91	□□□□□ -1.62
VHC1	YBR235W	YPL277C	Q08989	487 aa		4.91	□□□□□ -1.62
VHC1	YBR235W	RKR1	Q04781	1562 aa		4.91	□□□□□ -1.62
VHC1	YBR235W	REP1	P03871	373 aa		4.91	□□□□□ -1.62
VHC1	YBR235W	KIN2	P13186	1147 aa	Known RBP	4.91	□□□□□ -1.62
VHC1	YBR235W	RDS1	P25611	832 aa		4.91	□□□□□ -1.62
VHC1	YBR235W	PWP2	P25635	923 aa	Known RBP	4.91	□□□□□ -1.62
VHC1	YBR235W	AFG2	P32794	780 aa		4.91	□□□□□ -1.62
VHC1	YBR235W	VPS51	P36116	164 aa		4.91	□□□□□ -1.62
VHC1	YBR235W	AXL1	P40851	1208 aa		4.91	□□□□□ -1.62
VHC1	YBR235W	BBC1	P47068	1157 aa		4.91	□□□□□ -1.62
VHC1	YBR235W	URB2	P47108	1174 aa		4.91	□□□□□ -1.62
VHC1	YBR235W	SPO1	P53541	631 aa		4.91	□□□□□ -1.62
VHC1	YBR235W	RPN4	Q03465	531 aa		4.91	□□□□□ -1.62
VHC1	YBR235W	OPY2	Q06810	360 aa		4.91	□□□□□ -1.62
VHC1	YBR235W	ARG4	P04076	463 aa	Predicted RBP	4.9	□□□□□ -1.62
VHC1	YBR235W	YMR085W	P0CF18	432 aa		4.9	□□□□□ -1.62
VHC1	YBR235W	YCR016W	P25617	290 aa	Known RBP	4.9	□□□□□ -1.62
VHC1	YBR235W	PRR1	P28708	518 aa		4.9	□□□□□ -1.62
VHC1	YBR235W	KIP1	P28742	1111 aa		4.9	□□□□□ -1.62
VHC1	YBR235W	MRPL40	P36534	297 aa		4.9	□□□□□ -1.62
VHC1	YBR235W	GIP1	P38229	639 aa		4.9	□□□□□ -1.62
VHC1	YBR235W	RTS1	P38903	757 aa		4.9	□□□□□ -1.62
VHC1	YBR235W	MDJ2	P42834	146 aa		4.9	□□□□□ -1.62
VHC1	YBR235W	TMA22	P47089	198 aa	Predicted RBP	4.9	□□□□□ -1.62
VHC1	YBR235W	CTF18	P49956	741 aa		4.9	□□□□□ -1.62
VHC1	YBR235W	PEX21	P50091	288 aa		4.9	□□□□□ -1.62
VHC1	YBR235W	NAF1	P53919	492 aa	Known RBP	4.9	□□□□□ -1.62
VHC1	YBR235W	DMA2	P53924	522 aa		4.9	□□□□□ -1.62
VHC1	YBR235W	YNL108C	P53929	270 aa		4.9	□□□□□ -1.62
VHC1	YBR235W	RPM2	Q02773	1202 aa		4.9	□□□□□ -1.62
VHC1	YBR235W	OSM1	P21375	501 aa	Known RBP	4.9	□□□□□ -1.63
VHC1	YBR235W	OPI1	P21957	404 aa		4.9	□□□□□ -1.63
VHC1	YBR235W	DPB2	P24482	689 aa	Predicted RBP	4.9	□□□□□ -1.63
VHC1	YBR235W	MLS1	P30952	554 aa		4.9	□□□□□ -1.63
VHC1	YBR235W	GDA1	P32621	518 aa		4.9	□□□□□ -1.63
VHC1	YBR235W	SPC42	P36094	363 aa		4.9	□□□□□ -1.63
VHC1	YBR235W	MNN2	P38069	597 aa		4.9	□□□□□ -1.63
VHC1	YBR235W	IFA38	P38286	347 aa		4.9	□□□□□ -1.63
VHC1	YBR235W	YGL176C	P46945	554 aa		4.9	□□□□□ -1.63
VHC1	YBR235W	PAN2	P53010	1115 aa	Predicted RBP	4.9	□□□□□ -1.63
VHC1	YBR235W	PEX14	P53112	341 aa		4.9	□□□□□ -1.63
VHC1	YBR235W	RPN9	Q04062	393 aa	Known RBP	4.9	□□□□□ -1.63
VHC1	YBR235W	YLR287C	Q05881	355 aa		4.9	□□□□□ -1.63
VHC1	YBR235W	GYP5	Q12344	894 aa		4.9	□□□□□ -1.63
VHC1	YBR235W	SSK22	P25390	1331 aa	Predicted RBP	4.9	□□□□□ -1.63
VHC1	YBR235W	PGK1	P00560	416 aa	Known RBP	4.9	□□□□□ -1.63
VHC1	YBR235W	RPL24A	P04449	155 aa	Known RBP	4.9	□□□□□ -1.63
VHC1	YBR235W	CNA1	P23287	553 aa		4.9	□□□□□ -1.63
VHC1	YBR235W	GSY2	P27472	705 aa		4.9	□□□□□ -1.63
VHC1	YBR235W	MGM1	P32266	881 aa		4.9	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms