RNA–Protein interactions for RNA: YBR105C

VID24, Transcript of GID Complex regulatory subunit, yeast

Gene VID24, Length 1,089 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VID24	YBR105C	RPL11B	Q3E757	174 aa	Predicted RBP	4.14	□□□□□ -1.75
VID24	YBR105C	ERG4	P25340	473 aa		4.13	□□□□□ -1.75
VID24	YBR105C	KAR4	P25583	335 aa		4.13	□□□□□ -1.75
VID24	YBR105C	KRI1	P42846	591 aa	Known RBP	4.13	□□□□□ -1.75
VID24	YBR105C	ALD6	P54115	500 aa	Known RBP	4.13	□□□□□ -1.75
VID24	YBR105C	VPS16	Q03308	798 aa		4.13	□□□□□ -1.75
VID24	YBR105C	WRS1	Q12109	432 aa	Known RBP	4.13	□□□□□ -1.75
VID24	YBR105C	SLA2	P33338	968 aa		4.12	□□□□□ -1.75
VID24	YBR105C	SPC42	P36094	363 aa		4.12	□□□□□ -1.75
VID24	YBR105C	GNP1	P48813	663 aa		4.12	□□□□□ -1.75
VID24	YBR105C	YGR012W	P53206	393 aa		4.12	□□□□□ -1.75
VID24	YBR105C	GND2	P53319	492 aa		4.12	□□□□□ -1.75
VID24	YBR105C	SPE1	P08432	466 aa		4.11	□□□□□ -1.75
VID24	YBR105C	DBP2	P24783	546 aa	Known RBP	4.11	□□□□□ -1.75
VID24	YBR105C	CAD1	P24813	409 aa	Known RBP	4.11	□□□□□ -1.75
VID24	YBR105C	PEX2	P32800	271 aa		4.11	□□□□□ -1.75
VID24	YBR105C	NCS6	P53088	359 aa		4.11	□□□□□ -1.75
VID24	YBR105C	GUP2	Q08929	609 aa		4.11	□□□□□ -1.75
VID24	YBR105C	GNT1	Q12096	491 aa		4.11	□□□□□ -1.75
VID24	YBR105C	OSW2	Q12202	724 aa		4.11	□□□□□ -1.75
VID24	YBR105C	YAP1801	P38856	637 aa		4.1	□□□□□ -1.75
VID24	YBR105C	FAA4	P47912	694 aa	Known RBP	4.1	□□□□□ -1.75
VID24	YBR105C	MUK1	Q02866	612 aa		4.1	□□□□□ -1.75
VID24	YBR105C	SPO20	Q04359	397 aa		4.1	□□□□□ -1.75
VID24	YBR105C	CDA1	Q06702	301 aa		4.1	□□□□□ -1.75
VID24	YBR105C	AFT2	Q08957	416 aa		4.1	□□□□□ -1.75
VID24	YBR105C	URM1	P40554	99 aa	Predicted RBP	4.09	□□□□□ -1.75
VID24	YBR105C	PSP2	P50109	593 aa	Known RBP	4.09	□□□□□ -1.75
VID24	YBR105C	MTC3	P53077	123 aa		4.09	□□□□□ -1.75
VID24	YBR105C	TYW3	P53177	273 aa		4.09	□□□□□ -1.75
VID24	YBR105C	YGR053C	P53234	283 aa		4.09	□□□□□ -1.75
VID24	YBR105C	RNT1	Q02555	471 aa		4.09	□□□□□ -1.75
VID24	YBR105C	FAL1	Q12099	399 aa	Known RBP	4.09	□□□□□ -1.75
VID24	YBR105C	LYP1	P32487	611 aa		4.08	□□□□□ -1.76
VID24	YBR105C	RER2	P35196	286 aa		4.08	□□□□□ -1.76
VID24	YBR105C	MCM7	P38132	845 aa		4.08	□□□□□ -1.76
VID24	YBR105C	CCC2	P38995	1004 aa		4.08	□□□□□ -1.76
VID24	YBR105C	NNF1	P47149	201 aa		4.08	□□□□□ -1.76
VID24	YBR105C	ORC1	P54784	914 aa	Predicted RBP	4.08	□□□□□ -1.76
VID24	YBR105C	TRP4	P07285	380 aa	Predicted RBP	4.07	□□□□□ -1.76
VID24	YBR105C	PRI2	P20457	528 aa		4.07	□□□□□ -1.76
VID24	YBR105C	SRP101	P32916	621 aa		4.07	□□□□□ -1.76
VID24	YBR105C	DUT1	P33317	147 aa		4.07	□□□□□ -1.76
VID24	YBR105C	SNF7	P39929	240 aa	Known RBP	4.07	□□□□□ -1.76
VID24	YBR105C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
VID24	YBR105C	OPI10	Q08202	246 aa		4.07	□□□□□ -1.76
VID24	YBR105C	TRP2	P00899	507 aa	Known RBP	4.06	□□□□□ -1.76
VID24	YBR105C	PPR1	P07272	904 aa	Predicted RBP	4.06	□□□□□ -1.76
VID24	YBR105C	ATG19	P35193	415 aa		4.06	□□□□□ -1.76
VID24	YBR105C	PNT1	P38969	423 aa		4.06	□□□□□ -1.76
VID24	YBR105C	EEB1	Q02891	456 aa		4.06	□□□□□ -1.76
VID24	YBR105C	HOF1	Q05080	669 aa		4.06	□□□□□ -1.76
VID24	YBR105C	YAP7	Q08182	245 aa		4.06	□□□□□ -1.76
VID24	YBR105C	ALG7	P07286	448 aa		4.05	□□□□□ -1.76
VID24	YBR105C	HSF1	P10961	833 aa		4.05	□□□□□ -1.76
VID24	YBR105C	INO1	P11986	533 aa		4.05	□□□□□ -1.76
VID24	YBR105C	MDM10	P18409	493 aa		4.05	□□□□□ -1.76
VID24	YBR105C	TIF35	Q04067	274 aa	Known RBP	4.05	□□□□□ -1.76
VID24	YBR105C	SPP382	Q06411	708 aa	Predicted RBP	4.05	□□□□□ -1.76
VID24	YBR105C	TDA5	Q06417	326 aa	Known RBP	4.05	□□□□□ -1.76
VID24	YBR105C	ICT1	Q12385	394 aa		4.05	□□□□□ -1.76
VID24	YBR105C	YKL107W	P34251	309 aa		4.04	□□□□□ -1.76
VID24	YBR105C	MOT2	P34909	587 aa	Known RBP	4.04	□□□□□ -1.76
VID24	YBR105C	YLR225C	Q05948	407 aa	Known RBP	4.04	□□□□□ -1.76
VID24	YBR105C	WHI4	Q07655	649 aa	Known RBP	4.04	□□□□□ -1.76
VID24	YBR105C	RKM4	Q12504	494 aa		4.04	□□□□□ -1.76
VID24	YBR105C	GRX1	P25373	110 aa	Known RBP	4.03	□□□□□ -1.76
VID24	YBR105C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
VID24	YBR105C	ECM21	P38167	1117 aa	Known RBP	4.03	□□□□□ -1.76
VID24	YBR105C	SDS3	P40505	327 aa		4.03	□□□□□ -1.76
VID24	YBR105C	HBT1	Q07653	1046 aa	Known RBP	4.03	□□□□□ -1.76
VID24	YBR105C	SSF2	Q12153	453 aa	Predicted RBP	4.03	□□□□□ -1.76
VID24	YBR105C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
VID24	YBR105C	AGP1	P25376	633 aa		4.02	□□□□□ -1.77
VID24	YBR105C	SBA1	P28707	216 aa	Known RBP	4.02	□□□□□ -1.77
VID24	YBR105C	ABD1	P32783	436 aa	Predicted RBP	4.02	□□□□□ -1.77
VID24	YBR105C	OCA5	P38738	679 aa		4.02	□□□□□ -1.77
VID24	YBR105C	YGL176C	P46945	554 aa		4.02	□□□□□ -1.77
VID24	YBR105C	YJL049W	P47048	450 aa		4.02	□□□□□ -1.77
VID24	YBR105C	SPF1	P39986	1215 aa	Known RBP	4.01	□□□□□ -1.77
VID24	YBR105C	COQ11	Q05892	277 aa		4.01	□□□□□ -1.77
VID24	YBR105C	SPO75	Q07798	868 aa		4.01	□□□□□ -1.77
VID24	YBR105C	TRM13	Q12383	476 aa		4.01	□□□□□ -1.77
VID24	YBR105C	SRP40	P32583	406 aa	Predicted RBP	4	□□□□□ -1.77
VID24	YBR105C	PPZ2	P33329	710 aa		4	□□□□□ -1.77
VID24	YBR105C	YKL069W	P36088	180 aa		4	□□□□□ -1.77
VID24	YBR105C	IMO32	P53219	342 aa		4	□□□□□ -1.77
VID24	YBR105C	NAN1	Q02931	896 aa	Known RBP	4	□□□□□ -1.77
VID24	YBR105C	SHE9	Q04172	456 aa		4	□□□□□ -1.77
VID24	YBR105C	MRH1	Q12117	320 aa	Predicted RBP	4	□□□□□ -1.77
VID24	YBR105C	YOL098C	Q12496	1037 aa		4	□□□□□ -1.77
VID24	YBR105C	BNR1	P40450	1375 aa		4	□□□□□ -1.77
VID24	YBR105C	MRP8	P35719	219 aa		3.99	□□□□□ -1.77
VID24	YBR105C	VBA5	P36172	582 aa		3.99	□□□□□ -1.77
VID24	YBR105C	ESC2	Q06340	456 aa		3.99	□□□□□ -1.77
VID24	YBR105C	MDM38	Q08179	573 aa		3.99	□□□□□ -1.77
VID24	YBR105C	UPC2	Q12151	913 aa		3.99	□□□□□ -1.77
VID24	YBR105C	YLL058W	Q12198	575 aa		3.99	□□□□□ -1.77
VID24	YBR105C	SUT2	Q12286	268 aa		3.99	□□□□□ -1.77
VID24	YBR105C	OSH2	Q12451	1283 aa		3.99	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 35 ms