RNA–Protein interactions for RNA: YBR038W

CHS2, Transcript of Chitin synthase II, yeast

Gene CHS2, Length 2,892 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHS2	YBR038W	CCM1	P48237	864 aa	Predicted RBP	3.36	□□□□□ -1.87
CHS2	YBR038W	IRC4	Q03036	179 aa		3.36	□□□□□ -1.87
CHS2	YBR038W	SOV1	Q04748	898 aa		3.36	□□□□□ -1.87
CHS2	YBR038W	SKG3	Q06315	1026 aa		3.36	□□□□□ -1.87
CHS2	YBR038W	PSR2	Q07949	397 aa		3.36	□□□□□ -1.87
CHS2	YBR038W	TAF10	Q12030	206 aa		3.36	□□□□□ -1.87
CHS2	YBR038W	WRS1	Q12109	432 aa	Known RBP	3.36	□□□□□ -1.87
CHS2	YBR038W	SEC39	Q12745	709 aa		3.36	□□□□□ -1.87
CHS2	YBR038W	RNA1	P11745	407 aa	Known RBP	3.36	□□□□□ -1.87
CHS2	YBR038W	TUP1	P16649	713 aa		3.36	□□□□□ -1.87
CHS2	YBR038W	RAD53	P22216	821 aa		3.36	□□□□□ -1.87
CHS2	YBR038W	YCR051W	P25631	222 aa		3.36	□□□□□ -1.87
CHS2	YBR038W	SEC8	P32855	1065 aa		3.36	□□□□□ -1.87
CHS2	YBR038W	YKL091C	P33324	310 aa	Known RBP	3.36	□□□□□ -1.87
CHS2	YBR038W	LOS1	P33418	1100 aa	Predicted RBP	3.36	□□□□□ -1.87
CHS2	YBR038W	SET5	P38890	526 aa	Known RBP	3.36	□□□□□ -1.87
CHS2	YBR038W	TRS120	Q04183	1289 aa		3.36	□□□□□ -1.87
CHS2	YBR038W	CUR1	Q06469	252 aa		3.36	□□□□□ -1.87
CHS2	YBR038W	YPR078C	Q06813	372 aa		3.36	□□□□□ -1.87
CHS2	YBR038W	SIL1	Q08199	421 aa		3.36	□□□□□ -1.87
CHS2	YBR038W	NUC1	P08466	329 aa		3.35	□□□□□ -1.87
CHS2	YBR038W	PYC1	P11154	1178 aa	Known RBP	3.35	□□□□□ -1.87
CHS2	YBR038W	RPL8B	P29453	256 aa	Known RBP	3.35	□□□□□ -1.87
CHS2	YBR038W	YME1	P32795	747 aa		3.35	□□□□□ -1.87
CHS2	YBR038W	MRX1	P40050	688 aa		3.35	□□□□□ -1.87
CHS2	YBR038W	APL6	P46682	809 aa		3.35	□□□□□ -1.87
CHS2	YBR038W	SDA1	P53313	767 aa	Known RBP	3.35	□□□□□ -1.87
CHS2	YBR038W	RPT4	P53549	437 aa	Known RBP	3.35	□□□□□ -1.87
CHS2	YBR038W	TOF1	P53840	1238 aa		3.35	□□□□□ -1.87
CHS2	YBR038W	CSM3	Q04659	317 aa		3.35	□□□□□ -1.87
CHS2	YBR038W	APL5	Q08951	932 aa	Known RBP	3.35	□□□□□ -1.87
CHS2	YBR038W	CWC2	Q12046	339 aa	Predicted RBP	3.35	□□□□□ -1.87
CHS2	YBR038W	PMD1	P32634	1753 aa		3.35	□□□□□ -1.87
CHS2	YBR038W	ADH4	P10127	382 aa		3.35	□□□□□ -1.87
CHS2	YBR038W	DAL7	P21826	554 aa		3.35	□□□□□ -1.87
CHS2	YBR038W	PRO3	P32263	286 aa	Known RBP	3.35	□□□□□ -1.87
CHS2	YBR038W	EUG1	P32474	517 aa		3.35	□□□□□ -1.87
CHS2	YBR038W	RAD5	P32849	1169 aa	Predicted RBP	3.35	□□□□□ -1.87
CHS2	YBR038W	KTR2	P33550	425 aa		3.35	□□□□□ -1.87
CHS2	YBR038W	NPR2	P39923	615 aa		3.35	□□□□□ -1.87
CHS2	YBR038W	KAP114	P53067	1004 aa		3.35	□□□□□ -1.87
CHS2	YBR038W	VID30	P53076	958 aa		3.35	□□□□□ -1.87
CHS2	YBR038W	DSE4	P53753	1117 aa		3.35	□□□□□ -1.87
CHS2	YBR038W	FOL1	P53848	824 aa		3.35	□□□□□ -1.87
CHS2	YBR038W	ESBP6	P53918	673 aa		3.35	□□□□□ -1.87
CHS2	YBR038W	APP1	P53933	587 aa		3.35	□□□□□ -1.87
CHS2	YBR038W	BUL2	Q03758	920 aa	Known RBP	3.35	□□□□□ -1.87
CHS2	YBR038W	PRP42	Q03776	544 aa	Known RBP	3.35	□□□□□ -1.87
CHS2	YBR038W	ERF2	Q06551	359 aa		3.35	□□□□□ -1.87
CHS2	YBR038W	MED1	Q12321	566 aa		3.35	□□□□□ -1.87
CHS2	YBR038W	YEL076C-A	P0CX16	216 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	YLR464W	P0CX17	216 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	STI1	P15705	589 aa	Known RBP RIP-Chip data	3.34	□□□□□ -1.87	not detected
CHS2	YBR038W	GAL11	P19659	1081 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	KIP2	P28743	706 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	PSE1	P32337	1089 aa	Known RBP	3.34	□□□□□ -1.87
CHS2	YBR038W	PFF1	P38244	976 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	TOS1	P38288	455 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	YEL076C	P39971	216 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	COS5	P47187	383 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	MSN5	P52918	1224 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	BNI5	P53890	448 aa	Known RBP	3.34	□□□□□ -1.87
CHS2	YBR038W	CBK1	P53894	756 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	MFM1	Q02783	413 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	URH1	Q04179	340 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	GIS4	Q04233	774 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	ERV41	Q04651	352 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	SPO75	Q07798	868 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	NOB1	Q08444	459 aa	Known RBP	3.34	□□□□□ -1.87
CHS2	YBR038W	ABP140	Q08641	628 aa	Known RBP	3.34	□□□□□ -1.87
CHS2	YBR038W	PCL8	Q08966	492 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	3.34	□□□□□ -1.87	not detected
CHS2	YBR038W	PDB1	P32473	366 aa	Known RBP	3.34	□□□□□ -1.87
CHS2	YBR038W	RPT3	P33298	428 aa	Known RBP	3.34	□□□□□ -1.87
CHS2	YBR038W	MDL2	P33311	773 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	SWH1	P35845	1188 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	SET3	P36124	751 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	PET10	P36139	283 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	PPX1	P38698	397 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	YMR124W	P39523	943 aa	Known RBP	3.34	□□□□□ -1.87
CHS2	YBR038W	UBP5	P39944	805 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	YJL181W	P46987	611 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	JJJ2	P46997	583 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	RPC17	P47076	161 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	ILM1	P47155	203 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	NIS1	P53939	407 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	ERO1	Q03103	563 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	MTG1	Q03151	367 aa	Predicted RBP	3.34	□□□□□ -1.87
CHS2	YBR038W	YMR018W	Q04364	514 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	AGE1	Q04412	482 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	YMR114C	Q04471	368 aa	Known RBP	3.34	□□□□□ -1.87
CHS2	YBR038W	SPC24	Q04477	213 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	YDR338C	Q05497	695 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	MAG2	Q06436	670 aa	Known RBP	3.34	□□□□□ -1.87
CHS2	YBR038W	YOL075C	Q08234	1294 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	NCA2	Q12374	616 aa		3.34	□□□□□ -1.87
CHS2	YBR038W	FLO11	P08640	1367 aa		3.34	□□□□□ -1.88
CHS2	YBR038W	ERG11	P10614	530 aa		3.33	□□□□□ -1.88
CHS2	YBR038W	PEP5	P12868	1029 aa		3.33	□□□□□ -1.88
CHS2	YBR038W	KEX2	P13134	814 aa		3.33	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 55.2 ms