RNA–Protein interactions for RNA: YBL093C

ROX3, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene ROX3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROX3	YBL093C	PDR18	P53756	1333 aa		6.32	□□□□□ -1.4
ROX3	YBL093C	SEC18	P18759	758 aa	Known RBP	6.32	□□□□□ -1.4
ROX3	YBL093C	SAF1	P38352	637 aa		6.32	□□□□□ -1.4
ROX3	YBL093C	FYV10	P40492	516 aa		6.32	□□□□□ -1.4
ROX3	YBL093C	YGL140C	P53120	1219 aa		6.32	□□□□□ -1.4
ROX3	YBL093C	MRPS35	P53292	345 aa		6.32	□□□□□ -1.4
ROX3	YBL093C	DIB1	Q06819	143 aa	Predicted RBP	6.32	□□□□□ -1.4
ROX3	YBL093C	SNU66	Q12420	587 aa	Predicted RBP	6.32	□□□□□ -1.4
ROX3	YBL093C	FIG2	P25653	1609 aa		6.32	□□□□□ -1.4
ROX3	YBL093C	PGM1	P33401	570 aa	Known RBP	6.31	□□□□□ -1.4
ROX3	YBL093C	KAE1	P36132	386 aa		6.31	□□□□□ -1.4
ROX3	YBL093C	NEM1	P38757	446 aa		6.31	□□□□□ -1.4
ROX3	YBL093C	HXT13	P39924	564 aa		6.31	□□□□□ -1.4
ROX3	YBL093C	PIC2	P40035	300 aa		6.31	□□□□□ -1.4
ROX3	YBL093C	YGR045C	P53229	120 aa		6.31	□□□□□ -1.4
ROX3	YBL093C	SYF1	Q04048	859 aa	Predicted RBP	6.31	□□□□□ -1.4
ROX3	YBL093C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	6.31	□□□□□ -1.4	not detected
ROX3	YBL093C	VAS1	P07806	1104 aa	Known RBP	6.3	□□□□□ -1.4
ROX3	YBL093C	CHS2	P14180	963 aa		6.3	□□□□□ -1.4
ROX3	YBL093C	UGA2	P38067	497 aa		6.3	□□□□□ -1.4
ROX3	YBL093C	PIB2	P53191	635 aa		6.3	□□□□□ -1.4
ROX3	YBL093C	HXT17	P53631	564 aa		6.3	□□□□□ -1.4
ROX3	YBL093C	ELA1	P53861	379 aa	Predicted RBP	6.3	□□□□□ -1.4
ROX3	YBL093C	RMD1	Q03441	430 aa		6.3	□□□□□ -1.4
ROX3	YBL093C	UTP5	Q04177	643 aa	Known RBP	6.3	□□□□□ -1.4
ROX3	YBL093C	RPN7	Q06103	429 aa	Known RBP	6.3	□□□□□ -1.4
ROX3	YBL093C	BDF2	Q07442	638 aa		6.3	□□□□□ -1.4
ROX3	YBL093C	BRE1	Q07457	700 aa	Known RBP	6.3	□□□□□ -1.4
ROX3	YBL093C	POM152	P39685	1337 aa		6.29	□□□□□ -1.4
ROX3	YBL093C	IME2	P32581	645 aa		6.29	□□□□□ -1.4
ROX3	YBL093C	AAP1	P37898	856 aa	Known RBP	6.29	□□□□□ -1.4
ROX3	YBL093C	YNL193W	P53870	558 aa		6.29	□□□□□ -1.4
ROX3	YBL093C	ESF1	Q06344	628 aa	Known RBP	6.29	□□□□□ -1.4
ROX3	YBL093C	RIM20	Q12033	661 aa		6.29	□□□□□ -1.4
ROX3	YBL093C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	6.28	□□□□□ -1.4	not detected
ROX3	YBL093C	PCT1	P13259	424 aa		6.28	□□□□□ -1.4
ROX3	YBL093C	SPO74	P45819	413 aa		6.28	□□□□□ -1.4
ROX3	YBL093C	THI3	Q07471	609 aa		6.28	□□□□□ -1.4
ROX3	YBL093C	LAP2	Q10740	671 aa		6.28	□□□□□ -1.4
ROX3	YBL093C	YLR122C	Q12312	125 aa		6.28	□□□□□ -1.4
ROX3	YBL093C	SEC23	P15303	768 aa	Known RBP	6.27	□□□□□ -1.41
ROX3	YBL093C	MGM1	P32266	881 aa		6.27	□□□□□ -1.41
ROX3	YBL093C	NNK1	P36003	928 aa		6.27	□□□□□ -1.41
ROX3	YBL093C	ADD66	P36040	267 aa		6.27	□□□□□ -1.41
ROX3	YBL093C	RDH54	P38086	958 aa		6.27	□□□□□ -1.41
ROX3	YBL093C	PFF1	P38244	976 aa		6.27	□□□□□ -1.41
ROX3	YBL093C	HSE1	P38753	452 aa		6.27	□□□□□ -1.41
ROX3	YBL093C	YAR028W	P39548	234 aa		6.27	□□□□□ -1.41
ROX3	YBL093C	MSH4	P40965	878 aa	Predicted RBP	6.27	□□□□□ -1.41
ROX3	YBL093C	YNR063W	P53749	607 aa		6.27	□□□□□ -1.41
ROX3	YBL093C	EST2	Q06163	884 aa		6.27	□□□□□ -1.41
ROX3	YBL093C	GSC2	P40989	1895 aa		6.27	□□□□□ -1.41
ROX3	YBL093C	RPS4A	P0CX35	261 aa	Known RBP	6.26	□□□□□ -1.41
ROX3	YBL093C	RPS4B	P0CX36	261 aa	Known RBP	6.26	□□□□□ -1.41
ROX3	YBL093C	TAF13	P11747	167 aa		6.26	□□□□□ -1.41
ROX3	YBL093C	CAF20	P12962	161 aa	Known RBP	6.26	□□□□□ -1.41
ROX3	YBL093C	MSB1	P21339	1137 aa	Known RBP	6.26	□□□□□ -1.41
ROX3	YBL093C	FRD1	P32614	470 aa	Known RBP	6.26	□□□□□ -1.41
ROX3	YBL093C	SPL2	P38839	148 aa		6.26	□□□□□ -1.41
ROX3	YBL093C	MMM1	P41800	426 aa		6.26	□□□□□ -1.41
ROX3	YBL093C	SNU71	P53207	620 aa	Known RBP	6.26	□□□□□ -1.41
ROX3	YBL093C	PIF1	P07271	859 aa		6.25	□□□□□ -1.41
ROX3	YBL093C	HEM13	P11353	328 aa	Known RBP	6.25	□□□□□ -1.41
ROX3	YBL093C	NFS1	P25374	497 aa		6.25	□□□□□ -1.41
ROX3	YBL093C	ERT1	P38140	529 aa		6.25	□□□□□ -1.41
ROX3	YBL093C	NUG1	P40010	520 aa	Known RBP	6.25	□□□□□ -1.41
ROX3	YBL093C	YGR130C	P53278	816 aa		6.25	□□□□□ -1.41
ROX3	YBL093C	ERO1	Q03103	563 aa		6.25	□□□□□ -1.41
ROX3	YBL093C	FPR4	Q06205	392 aa	Predicted RBP	6.25	□□□□□ -1.41
ROX3	YBL093C	IRC3	Q06683	689 aa		6.25	□□□□□ -1.41
ROX3	YBL093C	RRI2	Q12348	645 aa		6.25	□□□□□ -1.41
ROX3	YBL093C	KRE2	P27809	442 aa		6.24	□□□□□ -1.41
ROX3	YBL093C	SMY1	P32364	656 aa	Known RBP	6.24	□□□□□ -1.41
ROX3	YBL093C	SMY2	P32909	740 aa	Known RBP	6.24	□□□□□ -1.41
ROX3	YBL093C	OSH3	P38713	996 aa	Known RBP	6.24	□□□□□ -1.41
ROX3	YBL093C	RPT4	P53549	437 aa	Known RBP	6.24	□□□□□ -1.41
ROX3	YBL093C	RKM2	Q03942	479 aa		6.24	□□□□□ -1.41
ROX3	YBL093C	MRL1	Q06815	381 aa		6.24	□□□□□ -1.41
ROX3	YBL093C	LAM4	P38800	1345 aa		6.24	□□□□□ -1.41
ROX3	YBL093C	GCR1	P07261	785 aa		6.23	□□□□□ -1.41
ROX3	YBL093C	OPI1	P21957	404 aa		6.23	□□□□□ -1.41
ROX3	YBL093C	RET1	P22276	1149 aa	Known RBP	6.23	□□□□□ -1.41
ROX3	YBL093C	LCB1	P25045	558 aa	Known RBP	6.23	□□□□□ -1.41
ROX3	YBL093C	PBY1	P38254	753 aa		6.23	□□□□□ -1.41
ROX3	YBL093C	CIT3	P43635	486 aa		6.23	□□□□□ -1.41
ROX3	YBL093C	MED7	Q08278	222 aa		6.23	□□□□□ -1.41
ROX3	YBL093C	YOR059C	Q08448	450 aa	Known RBP	6.23	□□□□□ -1.41
ROX3	YBL093C	DED1	P06634	604 aa	Known RBP	6.22	□□□□□ -1.41
ROX3	YBL093C	RNR2	P09938	399 aa	Known RBP	6.22	□□□□□ -1.41
ROX3	YBL093C	RAD27	P26793	382 aa		6.22	□□□□□ -1.41
ROX3	YBL093C	WHI3	P34761	661 aa	Known RBP	6.22	□□□□□ -1.41
ROX3	YBL093C	YMR147W	P40218	223 aa	Known RBP	6.22	□□□□□ -1.41
ROX3	YBL093C	EAF6	P47128	113 aa		6.22	□□□□□ -1.41
ROX3	YBL093C	ALT1	P52893	592 aa		6.22	□□□□□ -1.41
ROX3	YBL093C	KIN4	Q01919	800 aa		6.22	□□□□□ -1.41
ROX3	YBL093C	IRC4	Q03036	179 aa		6.22	□□□□□ -1.41
ROX3	YBL093C	INM2	Q05533	292 aa		6.22	□□□□□ -1.41
ROX3	YBL093C	HDA2	Q06629	674 aa		6.22	□□□□□ -1.41
ROX3	YBL093C	NSI1	Q12457	570 aa		6.22	□□□□□ -1.41
ROX3	YBL093C	TRP3	P00937	484 aa		6.21	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms