RNA–Protein interactions for RNA: YBL061C

SKT5, Transcript of Activator of Chs3p (chitin synthase III) during vegetative growth, yeast

Gene SKT5, Length 2,091 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKT5	YBL061C	PKH1	Q03407	766 aa		3.21	□□□□□ -1.9
SKT5	YBL061C	RCF1	Q03713	159 aa		3.21	□□□□□ -1.9
SKT5	YBL061C	GIR2	Q03768	265 aa	Predicted RBP	3.21	□□□□□ -1.9
SKT5	YBL061C	LCD1	Q04377	747 aa		3.21	□□□□□ -1.9
SKT5	YBL061C	HRQ1	Q05549	1077 aa		3.21	□□□□□ -1.9
SKT5	YBL061C	CYC7	P00045	113 aa		3.2	□□□□□ -1.9
SKT5	YBL061C	ACE2	P21192	770 aa		3.2	□□□□□ -1.9
SKT5	YBL061C	ADP1	P25371	1049 aa		3.2	□□□□□ -1.9
SKT5	YBL061C	YKL151C	P36059	337 aa		3.2	□□□□□ -1.9
SKT5	YBL061C	PET10	P36139	283 aa		3.2	□□□□□ -1.9
SKT5	YBL061C	YKR078W	P36158	585 aa	Known RBP	3.2	□□□□□ -1.9
SKT5	YBL061C	PTC7	P38797	343 aa		3.2	□□□□□ -1.9
SKT5	YBL061C	RTA1	P53047	317 aa		3.2	□□□□□ -1.9
SKT5	YBL061C	CEF1	Q03654	590 aa	Predicted RBP	3.2	□□□□□ -1.9
SKT5	YBL061C	UTP14	Q04500	899 aa	Known RBP	3.2	□□□□□ -1.9
SKT5	YBL061C	SPS1	P08458	490 aa		3.2	□□□□□ -1.9
SKT5	YBL061C	ERR1	P0CX10	437 aa		3.2	□□□□□ -1.9
SKT5	YBL061C	ERR2	P0CX11	437 aa		3.2	□□□□□ -1.9
SKT5	YBL061C	THI4	P32318	326 aa		3.2	□□□□□ -1.9
SKT5	YBL061C	AIM26	P32858	118 aa		3.2	□□□□□ -1.9
SKT5	YBL061C	DOM34	P33309	386 aa		3.2	□□□□□ -1.9
SKT5	YBL061C	SEC26	P41810	973 aa	Known RBP	3.2	□□□□□ -1.9
SKT5	YBL061C	UBP6	P43593	499 aa	Known RBP	3.2	□□□□□ -1.9
SKT5	YBL061C	CCM1	P48237	864 aa	Predicted RBP	3.2	□□□□□ -1.9
SKT5	YBL061C	BUL2	Q03758	920 aa	Known RBP	3.2	□□□□□ -1.9
SKT5	YBL061C	MTC5	Q03897	1148 aa		3.2	□□□□□ -1.9
SKT5	YBL061C	MDM38	Q08179	573 aa		3.2	□□□□□ -1.9
SKT5	YBL061C	MED7	Q08278	222 aa		3.2	□□□□□ -1.9
SKT5	YBL061C	TOM70	P07213	617 aa	Known RBP	3.19	□□□□□ -1.9
SKT5	YBL061C	PET111	P08468	800 aa		3.19	□□□□□ -1.9
SKT5	YBL061C	GCD1	P09032	578 aa	Predicted RBP	3.19	□□□□□ -1.9
SKT5	YBL061C	MSD1	P15179	658 aa	Known RBP	3.19	□□□□□ -1.9
SKT5	YBL061C	FUN30	P31380	1131 aa		3.19	□□□□□ -1.9
SKT5	YBL061C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
SKT5	YBL061C	YRO2	P38079	344 aa		3.19	□□□□□ -1.9
SKT5	YBL061C	YBR284W	P38150	797 aa		3.19	□□□□□ -1.9
SKT5	YBL061C	GTS1	P40956	396 aa		3.19	□□□□□ -1.9
SKT5	YBL061C	MTC3	P53077	123 aa		3.19	□□□□□ -1.9
SKT5	YBL061C	ORC3	P54790	616 aa		3.19	□□□□□ -1.9
SKT5	YBL061C	SRT1	Q03175	343 aa		3.19	□□□□□ -1.9
SKT5	YBL061C	SSY1	Q03770	852 aa		3.19	□□□□□ -1.9
SKT5	YBL061C	PSK2	Q08217	1101 aa		3.19	□□□□□ -1.9
SKT5	YBL061C	SVS1	Q12254	260 aa		3.19	□□□□□ -1.9
SKT5	YBL061C	TOP3	P13099	656 aa		3.18	□□□□□ -1.9
SKT5	YBL061C	RPC82	P32349	654 aa		3.18	□□□□□ -1.9
SKT5	YBL061C	AFR1	P33304	620 aa		3.18	□□□□□ -1.9
SKT5	YBL061C	RFC5	P38251	354 aa		3.18	□□□□□ -1.9
SKT5	YBL061C	AIM21	P40563	679 aa		3.18	□□□□□ -1.9
SKT5	YBL061C	SEC27	P41811	889 aa	Known RBP	3.18	□□□□□ -1.9
SKT5	YBL061C	GYP7	P48365	746 aa		3.18	□□□□□ -1.9
SKT5	YBL061C	MEH1	Q02205	184 aa		3.18	□□□□□ -1.9
SKT5	YBL061C	CFT2	Q12102	859 aa	Predicted RBP	3.18	□□□□□ -1.9
SKT5	YBL061C	YPR071W	Q12346	211 aa		3.18	□□□□□ -1.9
SKT5	YBL061C	TRP3	P00937	484 aa		3.18	□□□□□ -1.9
SKT5	YBL061C	MSH2	P25847	964 aa		3.18	□□□□□ -1.9
SKT5	YBL061C	REC104	P33323	182 aa		3.18	□□□□□ -1.9
SKT5	YBL061C	TSL1	P38427	1098 aa	Known RBP	3.18	□□□□□ -1.9
SKT5	YBL061C	MNN1	P39106	762 aa		3.18	□□□□□ -1.9
SKT5	YBL061C	GDH3	P39708	457 aa		3.18	□□□□□ -1.9
SKT5	YBL061C	HSV2	P50079	448 aa	Predicted RBP	3.18	□□□□□ -1.9
SKT5	YBL061C	FOL2	P51601	243 aa	Known RBP	3.18	□□□□□ -1.9
SKT5	YBL061C	UGO1	Q03327	502 aa		3.18	□□□□□ -1.9
SKT5	YBL061C	YDR341C	Q05506	607 aa	Known RBP	3.18	□□□□□ -1.9
SKT5	YBL061C	APL5	Q08951	932 aa	Known RBP	3.18	□□□□□ -1.9
SKT5	YBL061C	SEC3	P33332	1336 aa	Known RBP	3.18	□□□□□ -1.9
SKT5	YBL061C	TY1B-A	O13527	1196 aa	Known RBP	3.17	□□□□□ -1.9
SKT5	YBL061C	RAD51	P25454	400 aa		3.17	□□□□□ -1.9
SKT5	YBL061C	CDC48	P25694	835 aa	Known RBP	3.17	□□□□□ -1.9
SKT5	YBL061C	LTV1	P34078	463 aa		3.17	□□□□□ -1.9
SKT5	YBL061C	YKR073C	P36153	106 aa		3.17	□□□□□ -1.9
SKT5	YBL061C	YBR238C	P38330	731 aa	Known RBP	3.17	□□□□□ -1.9
SKT5	YBL061C	GIC1	P38785	314 aa		3.17	□□□□□ -1.9
SKT5	YBL061C	YER158C	P40095	573 aa		3.17	□□□□□ -1.9
SKT5	YBL061C	TOK1	P40310	691 aa		3.17	□□□□□ -1.9
SKT5	YBL061C	LSB3	P43603	459 aa	Known RBP	3.17	□□□□□ -1.9
SKT5	YBL061C	SDH1	Q00711	640 aa		3.17	□□□□□ -1.9
SKT5	YBL061C	IMH1	Q06704	911 aa	Known RBP	3.17	□□□□□ -1.9
SKT5	YBL061C	OSW2	Q12202	724 aa		3.17	□□□□□ -1.9
SKT5	YBL061C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
SKT5	YBL061C	KIN2	P13186	1147 aa	Known RBP	3.16	□□□□□ -1.9
SKT5	YBL061C	NPP1	P25353	742 aa		3.16	□□□□□ -1.9
SKT5	YBL061C	TOS1	P38288	455 aa		3.16	□□□□□ -1.9
SKT5	YBL061C	ALG2	P43636	503 aa		3.16	□□□□□ -1.9
SKT5	YBL061C	TAF1	P46677	1066 aa		3.16	□□□□□ -1.9
SKT5	YBL061C	HFM1	P51979	1187 aa		3.16	□□□□□ -1.9
SKT5	YBL061C	MAL11	P53048	616 aa		3.16	□□□□□ -1.9
SKT5	YBL061C	SIZ1	Q04195	904 aa		3.16	□□□□□ -1.9
SKT5	YBL061C	ECM16	Q04217	1267 aa	Known RBP	3.16	□□□□□ -1.9
SKT5	YBL061C	LPX1	Q12405	387 aa	Known RBP	3.16	□□□□□ -1.9
SKT5	YBL061C	MFT1	P33441	392 aa	Known RBP	3.16	□□□□□ -1.9
SKT5	YBL061C	MPE1	P35728	441 aa	Known RBP	3.16	□□□□□ -1.9
SKT5	YBL061C	YAP1801	P38856	637 aa		3.16	□□□□□ -1.9
SKT5	YBL061C	AIM20	P40451	204 aa		3.16	□□□□□ -1.9
SKT5	YBL061C	YKE2	P52553	114 aa		3.16	□□□□□ -1.9
SKT5	YBL061C	TAN1	P53072	289 aa	Predicted RBP	3.16	□□□□□ -1.9
SKT5	YBL061C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	3.16	□□□□□ -1.9	not detected
SKT5	YBL061C	RSM24	Q03976	319 aa		3.16	□□□□□ -1.9
SKT5	YBL061C	RPN7	Q06103	429 aa	Known RBP	3.16	□□□□□ -1.9
SKT5	YBL061C	CLF1	Q12309	687 aa	Predicted RBP	3.16	□□□□□ -1.9
SKT5	YBL061C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.9	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 72.7 ms