RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W YFL052WP43551 465 aa6.62□□□□□ -1.35
SHP1YBL058W JJJ3P47138 172 aa6.62□□□□□ -1.35
SHP1YBL058W PIG1Q06216 648 aa6.62□□□□□ -1.35
SHP1YBL058W SUP45P12385 437 aaKnown RBP6.61□□□□□ -1.35
SHP1YBL058W HCA4P20448 770 aaKnown RBP6.61□□□□□ -1.35
SHP1YBL058W SWI4P25302 1093 aaKnown RBP6.61□□□□□ -1.35
SHP1YBL058W PPZ1P26570 692 aa6.61□□□□□ -1.35
SHP1YBL058W SAS3P34218 831 aa6.61□□□□□ -1.35
SHP1YBL058W PTC4P38089 393 aa6.61□□□□□ -1.35
SHP1YBL058W SAF1P38352 637 aa6.61□□□□□ -1.35
SHP1YBL058W YHL026CP38740 315 aa6.61□□□□□ -1.35
SHP1YBL058W EAF5P39995 279 aa6.61□□□□□ -1.35
SHP1YBL058W ESL1P40456 1118 aa6.61□□□□□ -1.35
SHP1YBL058W YGL138CP53122 345 aa6.61□□□□□ -1.35
SHP1YBL058W TPO2P53283 614 aa6.61□□□□□ -1.35
SHP1YBL058W YNL134CP53912 376 aaKnown RBP6.61□□□□□ -1.35
SHP1YBL058W GCR2Q01722 534 aa6.61□□□□□ -1.35
SHP1YBL058W PCD1Q12524 340 aa6.61□□□□□ -1.35
SHP1YBL058W KEX2P13134 814 aa6.6□□□□□ -1.35
SHP1YBL058W FBP26P32604 452 aa6.6□□□□□ -1.35
SHP1YBL058W OPY1P38271 328 aa6.6□□□□□ -1.35
SHP1YBL058W APM2P38700 605 aa6.6□□□□□ -1.35
SHP1YBL058W AIM9P40053 627 aaKnown RBP6.6□□□□□ -1.35
SHP1YBL058W SPO22P40511 975 aa6.6□□□□□ -1.35
SHP1YBL058W CSN12P47130 423 aa6.6□□□□□ -1.35
SHP1YBL058W ALT2P52892 507 aa6.6□□□□□ -1.35
SHP1YBL058W DSE4P53753 1117 aa6.6□□□□□ -1.35
SHP1YBL058W CSM3Q04659 317 aa6.6□□□□□ -1.35
SHP1YBL058W COQ9Q05779 260 aa6.6□□□□□ -1.35
SHP1YBL058W SMC5Q08204 1093 aa6.6□□□□□ -1.35
SHP1YBL058W WHI2P12611 486 aa6.59□□□□□ -1.35
SHP1YBL058W CLN3P13365 580 aa6.59□□□□□ -1.35
SHP1YBL058W ADE2P21264 571 aaKnown RBP6.59□□□□□ -1.35
SHP1YBL058W BIO2P32451 375 aa6.59□□□□□ -1.35
SHP1YBL058W BMH2P34730 273 aaKnown RBP6.59□□□□□ -1.35
SHP1YBL058W YHR202WP38887 602 aa6.59□□□□□ -1.35
SHP1YBL058W CCC2P38995 1004 aa6.59□□□□□ -1.35
SHP1YBL058W FIS1P40515 155 aa6.59□□□□□ -1.35
SHP1YBL058W KRI1P42846 591 aaKnown RBP6.59□□□□□ -1.35
SHP1YBL058W YGL081WP53156 320 aa6.59□□□□□ -1.35
SHP1YBL058W RET3P53600 189 aa6.59□□□□□ -1.35
SHP1YBL058W MFM1Q02783 413 aa6.59□□□□□ -1.35
SHP1YBL058W TFB3Q03290 321 aa6.59□□□□□ -1.35
SHP1YBL058W IRC10Q08118 586 aa6.59□□□□□ -1.35
SHP1YBL058W SGO1Q08490 590 aa6.59□□□□□ -1.35
SHP1YBL058W ADE4P04046 510 aaKnown RBP6.58□□□□□ -1.36
SHP1YBL058W VPS1P21576 704 aaKnown RBP6.58□□□□□ -1.36
SHP1YBL058W GSY1P23337 708 aa6.58□□□□□ -1.36
SHP1YBL058W IMG2P25642 146 aaPredicted RBP6.58□□□□□ -1.36
SHP1YBL058W CSE2P33308 149 aa6.58□□□□□ -1.36
SHP1YBL058W GCS1P35197 352 aa6.58□□□□□ -1.36
SHP1YBL058W RPN10P38886 268 aaKnown RBP6.58□□□□□ -1.36
SHP1YBL058W YTA12P40341 825 aa6.58□□□□□ -1.36
SHP1YBL058W MOB1P40484 314 aa6.58□□□□□ -1.36
SHP1YBL058W YIR016WP40572 265 aa6.58□□□□□ -1.36
SHP1YBL058W ROD1Q02805 837 aa6.58□□□□□ -1.36
SHP1YBL058W HCR1Q05775 265 aaKnown RBP6.58□□□□□ -1.36
SHP1YBL058W MRN1Q08925 612 aaKnown RBP RIP-Chip data6.58□□□□□ -1.36not detected
SHP1YBL058W SEC21P32074 935 aaKnown RBP6.57□□□□□ -1.36
SHP1YBL058W ULP2P40537 1034 aaPredicted RBP6.57□□□□□ -1.36
SHP1YBL058W MAF1P41910 395 aa6.57□□□□□ -1.36
SHP1YBL058W ARP5P53946 755 aa6.57□□□□□ -1.36
SHP1YBL058W DOT1Q04089 582 aaKnown RBP6.57□□□□□ -1.36
SHP1YBL058W MNL2Q12205 849 aa6.57□□□□□ -1.36
SHP1YBL058W CEX1Q12453 761 aa6.57□□□□□ -1.36
SHP1YBL058W CDC6P09119 513 aa6.56□□□□□ -1.36
SHP1YBL058W MATALPHA2P0CY08 210 aa6.56□□□□□ -1.36
SHP1YBL058W HMLALPHA2P0CY09 210 aa6.56□□□□□ -1.36
SHP1YBL058W BET2P20133 325 aa6.56□□□□□ -1.36
SHP1YBL058W PEX1P24004 1043 aa6.56□□□□□ -1.36
SHP1YBL058W PRP22P24384 1145 aaKnown RBP6.56□□□□□ -1.36
SHP1YBL058W TMT1P32643 299 aa6.56□□□□□ -1.36
SHP1YBL058W PEX2P32800 271 aa6.56□□□□□ -1.36
SHP1YBL058W ATG32P40458 529 aa6.56□□□□□ -1.36
SHP1YBL058W LAM5P43560 674 aa6.56□□□□□ -1.36
SHP1YBL058W AVT1P47082 602 aa6.56□□□□□ -1.36
SHP1YBL058W YGR130CP53278 816 aa6.56□□□□□ -1.36
SHP1YBL058W TRS120Q04183 1289 aa6.56□□□□□ -1.36
SHP1YBL058W YLR257WQ06146 321 aaKnown RBP6.56□□□□□ -1.36
SHP1YBL058W NOC3Q07896 663 aaPredicted RBP6.56□□□□□ -1.36
SHP1YBL058W YOR022CQ12204 715 aa6.56□□□□□ -1.36
SHP1YBL058W SNF1P06782 633 aaKnown RBP6.55□□□□□ -1.36
SHP1YBL058W SRD1P09007 221 aa6.55□□□□□ -1.36
SHP1YBL058W FYV10P40492 516 aa6.55□□□□□ -1.36
SHP1YBL058W ISM1P48526 1002 aa6.55□□□□□ -1.36
SHP1YBL058W YKE2P52553 114 aa6.55□□□□□ -1.36
SHP1YBL058W PGA2P53903 129 aa6.55□□□□□ -1.36
SHP1YBL058W NAF1P53919 492 aaKnown RBP6.55□□□□□ -1.36
SHP1YBL058W MRI1Q06489 411 aaKnown RBP6.55□□□□□ -1.36
SHP1YBL058W SEN1Q00416 2231 aaKnown RBP6.55□□□□□ -1.36
SHP1YBL058W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.54□□□□□ -1.36 RIP-Chip
SHP1YBL058W TRL1P09880 827 aaKnown RBP6.54□□□□□ -1.36
SHP1YBL058W APE1P14904 514 aa6.54□□□□□ -1.36
SHP1YBL058W THR4P16120 514 aaKnown RBP6.54□□□□□ -1.36
SHP1YBL058W GLN3P18494 730 aa6.54□□□□□ -1.36
SHP1YBL058W ASF1P32447 279 aa6.54□□□□□ -1.36
SHP1YBL058W DPH2P32461 534 aa6.54□□□□□ -1.36
SHP1YBL058W YKL097CP34245 136 aa6.54□□□□□ -1.36
SHP1YBL058W CCL1P37366 393 aa6.54□□□□□ -1.36
SHP1YBL058W ERC1P38767 581 aa6.54□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms