RNA–Protein interactions for RNA: YBL031W

SHE1, Transcript of Mitotic spindle protein, yeast

Gene SHE1, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE1	YBL031W	HOS3	Q02959	697 aa	Known RBP	5.54	□□□□□ -1.52
SHE1	YBL031W	DUS3	Q06053	668 aa	Known RBP	5.54	□□□□□ -1.52
SHE1	YBL031W	YGR161W-C	Q3E744	92 aa		5.54	□□□□□ -1.52
SHE1	YBL031W	GEA1	P47102	1408 aa	Predicted RBP	5.54	□□□□□ -1.52
SHE1	YBL031W	BPT1	P14772	1559 aa		5.54	□□□□□ -1.52
SHE1	YBL031W	PPH3	P32345	308 aa		5.53	□□□□□ -1.52
SHE1	YBL031W	YSC84	P32793	468 aa		5.53	□□□□□ -1.52
SHE1	YBL031W	CCZ1	P38273	704 aa		5.53	□□□□□ -1.52
SHE1	YBL031W	SSY1	Q03770	852 aa		5.53	□□□□□ -1.52
SHE1	YBL031W	HBN1	Q96VH4	193 aa		5.53	□□□□□ -1.52
SHE1	YBL031W	SEC3	P33332	1336 aa	Known RBP	5.52	□□□□□ -1.53
SHE1	YBL031W	TSC11	P40061	1430 aa		5.52	□□□□□ -1.53
SHE1	YBL031W	MSH2	P25847	964 aa		5.52	□□□□□ -1.53
SHE1	YBL031W	CDC12	P32468	407 aa	Known RBP	5.52	□□□□□ -1.53
SHE1	YBL031W	SLA2	P33338	968 aa		5.52	□□□□□ -1.53
SHE1	YBL031W	BET3	P36149	193 aa		5.52	□□□□□ -1.53
SHE1	YBL031W	BAP2	P38084	609 aa		5.52	□□□□□ -1.53
SHE1	YBL031W	YLL058W	Q12198	575 aa		5.52	□□□□□ -1.53
SHE1	YBL031W	TOM70	P07213	617 aa	Known RBP	5.51	□□□□□ -1.53
SHE1	YBL031W	SNF5	P18480	905 aa		5.51	□□□□□ -1.53
SHE1	YBL031W	DBP2	P24783	546 aa	Known RBP	5.51	□□□□□ -1.53
SHE1	YBL031W	SRO9	P25567	434 aa	Known RBP	5.51	□□□□□ -1.53
SHE1	YBL031W	TSA1	P34760	196 aa	Known RBP	5.51	□□□□□ -1.53
SHE1	YBL031W	PIK1	P39104	1066 aa		5.51	□□□□□ -1.53
SHE1	YBL031W	UGO1	Q03327	502 aa		5.51	□□□□□ -1.53
SHE1	YBL031W	TRE1	Q08919	783 aa		5.51	□□□□□ -1.53
SHE1	YBL031W	CAT8	P39113	1433 aa		5.5	□□□□□ -1.53
SHE1	YBL031W	NUP170	P38181	1502 aa		5.5	□□□□□ -1.53
SHE1	YBL031W	ADE8	P04161	214 aa		5.5	□□□□□ -1.53
SHE1	YBL031W	PRO1	P32264	428 aa		5.5	□□□□□ -1.53
SHE1	YBL031W	DOM34	P33309	386 aa		5.5	□□□□□ -1.53
SHE1	YBL031W	PET10	P36139	283 aa		5.5	□□□□□ -1.53
SHE1	YBL031W	UGA2	P38067	497 aa		5.5	□□□□□ -1.53
SHE1	YBL031W	YHL012W	P38709	493 aa		5.5	□□□□□ -1.53
SHE1	YBL031W	NMD3	P38861	518 aa	Known RBP	5.5	□□□□□ -1.53
SHE1	YBL031W	MXR1	P40029	184 aa		5.5	□□□□□ -1.53
SHE1	YBL031W	UBP6	P43593	499 aa	Known RBP	5.5	□□□□□ -1.53
SHE1	YBL031W	EAR1	Q03212	550 aa		5.5	□□□□□ -1.53
SHE1	YBL031W	LCD1	Q04377	747 aa		5.5	□□□□□ -1.53
SHE1	YBL031W	NBA1	Q08229	501 aa	Known RBP	5.5	□□□□□ -1.53
SHE1	YBL031W	YVC1	Q12324	675 aa		5.5	□□□□□ -1.53
SHE1	YBL031W	MDL2	P33311	773 aa		5.49	□□□□□ -1.53
SHE1	YBL031W	ENP1	P38333	483 aa	Known RBP	5.49	□□□□□ -1.53
SHE1	YBL031W	GDH3	P39708	457 aa		5.49	□□□□□ -1.53
SHE1	YBL031W	HSV2	P50079	448 aa	Predicted RBP	5.49	□□□□□ -1.53
SHE1	YBL031W	NOP14	Q99207	810 aa	Known RBP	5.49	□□□□□ -1.53
SHE1	YBL031W	SSM4	P40318	1319 aa		5.48	□□□□□ -1.53
SHE1	YBL031W	SNT2	P53127	1403 aa		5.48	□□□□□ -1.53
SHE1	YBL031W	MSD1	P15179	658 aa	Known RBP	5.48	□□□□□ -1.53
SHE1	YBL031W	THI80	P35202	319 aa		5.48	□□□□□ -1.53
SHE1	YBL031W	YKR078W	P36158	585 aa	Known RBP	5.48	□□□□□ -1.53
SHE1	YBL031W	SAH1	P39954	449 aa	Known RBP	5.48	□□□□□ -1.53
SHE1	YBL031W	YJR142W	P47173	342 aa		5.48	□□□□□ -1.53
SHE1	YBL031W	IOC4	Q04213	475 aa		5.48	□□□□□ -1.53
SHE1	YBL031W	NTG2	Q08214	380 aa		5.48	□□□□□ -1.53
SHE1	YBL031W	TOP3	P13099	656 aa		5.47	□□□□□ -1.53
SHE1	YBL031W	SAM35	P14693	329 aa		5.47	□□□□□ -1.53
SHE1	YBL031W	YRO2	P38079	344 aa		5.47	□□□□□ -1.53
SHE1	YBL031W	YBR284W	P38150	797 aa		5.47	□□□□□ -1.53
SHE1	YBL031W	RRT14	P40470	206 aa		5.47	□□□□□ -1.53
SHE1	YBL031W	CCM1	P48237	864 aa	Predicted RBP	5.47	□□□□□ -1.53
SHE1	YBL031W	HRQ1	Q05549	1077 aa		5.47	□□□□□ -1.53
SHE1	YBL031W	ATG13	Q06628	738 aa		5.47	□□□□□ -1.53
SHE1	YBL031W	GSY1	P23337	708 aa		5.46	□□□□□ -1.54
SHE1	YBL031W	AIM3	P38266	947 aa	Known RBP	5.46	□□□□□ -1.54
SHE1	YBL031W	ALG2	P43636	503 aa		5.46	□□□□□ -1.54
SHE1	YBL031W	MAL11	P53048	616 aa		5.46	□□□□□ -1.54
SHE1	YBL031W	BUL2	Q03758	920 aa	Known RBP	5.46	□□□□□ -1.54
SHE1	YBL031W	BI4	P03879	638 aa		5.45	□□□□□ -1.54
SHE1	YBL031W	PRP6	P19735	899 aa	Predicted RBP	5.45	□□□□□ -1.54
SHE1	YBL031W	SFP1	P32432	683 aa		5.45	□□□□□ -1.54
SHE1	YBL031W	PEX6	P33760	1030 aa		5.45	□□□□□ -1.54
SHE1	YBL031W	PTC7	P38797	343 aa		5.45	□□□□□ -1.54
SHE1	YBL031W	YFL054C	P43549	646 aa		5.45	□□□□□ -1.54
SHE1	YBL031W	GYP7	P48365	746 aa		5.45	□□□□□ -1.54
SHE1	YBL031W	MDM38	Q08179	573 aa		5.45	□□□□□ -1.54
SHE1	YBL031W	YPR071W	Q12346	211 aa		5.45	□□□□□ -1.54
SHE1	YBL031W	MDM12	Q92328	271 aa		5.45	□□□□□ -1.54
SHE1	YBL031W	PDR15	Q04182	1529 aa	Known RBP	5.44	□□□□□ -1.54
SHE1	YBL031W	SRM1	P21827	482 aa		5.44	□□□□□ -1.54
SHE1	YBL031W	FUN30	P31380	1131 aa		5.44	□□□□□ -1.54
SHE1	YBL031W	RPC82	P32349	654 aa		5.44	□□□□□ -1.54
SHE1	YBL031W	AFR1	P33304	620 aa		5.44	□□□□□ -1.54
SHE1	YBL031W	REC104	P33323	182 aa		5.44	□□□□□ -1.54
SHE1	YBL031W	YKL151C	P36059	337 aa		5.44	□□□□□ -1.54
SHE1	YBL031W	FLR1	P38124	548 aa		5.44	□□□□□ -1.54
SHE1	YBL031W	PAF1	P38351	445 aa		5.44	□□□□□ -1.54
SHE1	YBL031W	YER158C	P40095	573 aa		5.44	□□□□□ -1.54
SHE1	YBL031W	TOK1	P40310	691 aa		5.44	□□□□□ -1.54
SHE1	YBL031W	RSC58	Q07979	502 aa		5.44	□□□□□ -1.54
SHE1	YBL031W	RCL1	Q08096	367 aa	Predicted RBP	5.44	□□□□□ -1.54
SHE1	YBL031W	RSB1	Q08417	382 aa		5.44	□□□□□ -1.54
SHE1	YBL031W	GEA2	P39993	1459 aa	Known RBP	5.44	□□□□□ -1.54
SHE1	YBL031W	SRB8	P25648	1427 aa		5.43	□□□□□ -1.54
SHE1	YBL031W	MMS1	Q06211	1407 aa		5.43	□□□□□ -1.54
SHE1	YBL031W	ACE2	P21192	770 aa		5.43	□□□□□ -1.54
SHE1	YBL031W	YBR238C	P38330	731 aa	Known RBP	5.43	□□□□□ -1.54
SHE1	YBL031W	PEX7	P39108	375 aa		5.43	□□□□□ -1.54
SHE1	YBL031W	GTS1	P40956	396 aa		5.43	□□□□□ -1.54
SHE1	YBL031W	NOP2	P40991	618 aa	Known RBP	5.43	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms