RNA–Protein interactions for RNA: ENST00000627241.1

RBM12B-208, Transcript of RNA binding motif protein 12B, human

APPRIS ALT2 TSL 2 BASIC

Gene RBM12B, Length 2,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM12B-208	ENST00000627241	ZNF330	Q9Y3S2	320 aa	Predicted RBP	14.05	□□□□□ -0.16
RBM12B-208	ENST00000627241	ARFGEF2	Q9Y6D5	1785 aa		14.05	□□□□□ -0.16
RBM12B-208	ENST00000627241	PCDH11X	Q9BZA7	1347 aa		14.05	□□□□□ -0.16
RBM12B-208	ENST00000627241	PCDH11Y	Q9BZA8	1340 aa		14.05	□□□□□ -0.16
RBM12B-208	ENST00000627241	SASH1	O94885	1247 aa		14.05	□□□□□ -0.16
RBM12B-208	ENST00000627241	ANKRD13D	Q6ZTN6	518 aa		14.05	□□□□□ -0.16
RBM12B-208	ENST00000627241	KCP	Q6ZWJ8	1503 aa		14.05	□□□□□ -0.16
RBM12B-208	ENST00000627241	CHGB	P05060	677 aa		14.04	□□□□□ -0.16
RBM12B-208	ENST00000627241	GCKR	Q14397	625 aa		14.04	□□□□□ -0.16
RBM12B-208	ENST00000627241	UBE3B	Q7Z3V4	1068 aa		14.04	□□□□□ -0.16
RBM12B-208	ENST00000627241	ZBTB3	Q9H5J0	574 aa		14.04	□□□□□ -0.16
RBM12B-208	ENST00000627241	NDUFB9	Q9Y6M9	179 aa		14.04	□□□□□ -0.16
RBM12B-208	ENST00000627241	DTNB	O60941	627 aa		14.04	□□□□□ -0.16
RBM12B-208	ENST00000627241	UBR2	Q8IWV8	1755 aa		14.03	□□□□□ -0.16
RBM12B-208	ENST00000627241	ABCC6	O95255	1503 aa		14.03	□□□□□ -0.16
RBM12B-208	ENST00000627241	PIGB	Q92521	554 aa		14.03	□□□□□ -0.16
RBM12B-208	ENST00000627241	SLC4A9	Q96Q91	983 aa		14.03	□□□□□ -0.16
RBM12B-208	ENST00000627241	METTL22	Q9BUU2	404 aa	Predicted RBP	14.03	□□□□□ -0.16
RBM12B-208	ENST00000627241	CCDC8	Q9H0W5	538 aa	Predicted RBP	14.03	□□□□□ -0.16
RBM12B-208	ENST00000627241	COL16A1	Q07092	1604 aa	Predicted RBP	14.02	□□□□□ -0.16
RBM12B-208	ENST00000627241	ALDH1L1	O75891	902 aa		14.02	□□□□□ -0.16
RBM12B-208	ENST00000627241	CHML	P26374	656 aa		14.02	□□□□□ -0.16
RBM12B-208	ENST00000627241	OS9	Q13438	667 aa	Predicted RBP	14.02	□□□□□ -0.16
RBM12B-208	ENST00000627241	ITGB4	P16144	1822 aa		14.02	□□□□□ -0.17
RBM12B-208	ENST00000627241	MTX1	Q13505	466 aa		14.02	□□□□□ -0.17
RBM12B-208	ENST00000627241	COL9A3	Q14050	684 aa	Predicted RBP	14.02	□□□□□ -0.17
RBM12B-208	ENST00000627241	EAF2	Q96CJ1	260 aa	Predicted RBP	14.02	□□□□□ -0.17
RBM12B-208	ENST00000627241	STAP2	Q9UGK3	403 aa		14.02	□□□□□ -0.17
RBM12B-208	ENST00000627241	EDC3	Q96F86	508 aa	Known RBP	14.01	□□□□□ -0.17
RBM12B-208	ENST00000627241	PIP4K2B	P78356	416 aa		14.01	□□□□□ -0.17
RBM12B-208	ENST00000627241	SYNE4	Q8N205	404 aa		14.01	□□□□□ -0.17
RBM12B-208	ENST00000627241	NKX1-1	Q15270	411 aa	Predicted RBP	14	□□□□□ -0.17
RBM12B-208	ENST00000627241	HSCB	Q8IWL3	235 aa		14	□□□□□ -0.17
RBM12B-208	ENST00000627241	DNAJC10	Q8IXB1	793 aa		14	□□□□□ -0.17
RBM12B-208	ENST00000627241	KIF1BP	Q96EK5	621 aa		14	□□□□□ -0.17
RBM12B-208	ENST00000627241	CHAMP1	Q96JM3	812 aa		14	□□□□□ -0.17
RBM12B-208	ENST00000627241	ESYT1	Q9BSJ8	1104 aa		14	□□□□□ -0.17
RBM12B-208	ENST00000627241	CCDC9	Q9Y3X0	531 aa	Known RBP	14	□□□□□ -0.17
RBM12B-208	ENST00000627241	UTY	O14607	1347 aa		14	□□□□□ -0.17
RBM12B-208	ENST00000627241	NUTM2B	A6NNL0	878 aa	Predicted RBP	14	□□□□□ -0.17
RBM12B-208	ENST00000627241	NUTM2E	B1AL46	878 aa	Predicted RBP	14	□□□□□ -0.17
RBM12B-208	ENST00000627241	DDIT3	P35638	169 aa		14	□□□□□ -0.17
RBM12B-208	ENST00000627241	NUTM2A	Q8IVF1	878 aa	Predicted RBP	14	□□□□□ -0.17
RBM12B-208	ENST00000627241	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	14	□□□□□ -0.17
RBM12B-208	ENST00000627241	LAMB4	A4D0S4	1761 aa		14	□□□□□ -0.17
RBM12B-208	ENST00000627241		A0A087WZG4	1122 aa		13.99	□□□□□ -0.17
RBM12B-208	ENST00000627241	DDX58	O95786	925 aa	Known RBP	13.99	□□□□□ -0.17
RBM12B-208	ENST00000627241	PKP1	Q13835	747 aa		13.99	□□□□□ -0.17
RBM12B-208	ENST00000627241	NOL8	Q76FK4	1167 aa	Known RBP	13.99	□□□□□ -0.17
RBM12B-208	ENST00000627241	SYTL4	Q96C24	671 aa	Predicted RBP	13.99	□□□□□ -0.17
RBM12B-208	ENST00000627241	HSP90AB1	P08238	724 aa	Known RBP	13.99	□□□□□ -0.17
RBM12B-208	ENST00000627241	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.99	□□□□□ -0.17
RBM12B-208	ENST00000627241	ANO2	Q9NQ90	1003 aa		13.99	□□□□□ -0.17
RBM12B-208	ENST00000627241	PAPPA	Q13219	1627 aa		13.99	□□□□□ -0.17
RBM12B-208	ENST00000627241	ERC2	O15083	957 aa		13.98	□□□□□ -0.17
RBM12B-208	ENST00000627241	CASP7	P55210	303 aa		13.98	□□□□□ -0.17
RBM12B-208	ENST00000627241	AACS	Q86V21	672 aa		13.98	□□□□□ -0.17
RBM12B-208	ENST00000627241	ATG3	Q9NT62	314 aa		13.98	□□□□□ -0.17
RBM12B-208	ENST00000627241	LTBP4	Q8N2S1	1624 aa		13.97	□□□□□ -0.17
RBM12B-208	ENST00000627241		A0A0G2JS52	829 aa		13.97	□□□□□ -0.17
RBM12B-208	ENST00000627241	ERVV-2	B6SEH9	535 aa		13.97	□□□□□ -0.17
RBM12B-208	ENST00000627241	RFX5	P48382	616 aa	Predicted RBP	13.97	□□□□□ -0.17
RBM12B-208	ENST00000627241	SNX21	Q969T3	373 aa		13.97	□□□□□ -0.17
RBM12B-208	ENST00000627241	ARX	Q96QS3	562 aa		13.97	□□□□□ -0.17
RBM12B-208	ENST00000627241	LARP6	Q9BRS8	491 aa	Known RBP	13.97	□□□□□ -0.17
RBM12B-208	ENST00000627241	NEXN	Q0ZGT2	675 aa		13.97	□□□□□ -0.17
RBM12B-208	ENST00000627241	CWC27	Q6UX04	472 aa	Known RBP	13.97	□□□□□ -0.17
RBM12B-208	ENST00000627241	ZGPAT	Q8N5A5	531 aa	Known RBP	13.97	□□□□□ -0.17
RBM12B-208	ENST00000627241	ZNF594	Q96JF6	807 aa	Predicted RBP	13.97	□□□□□ -0.17
RBM12B-208	ENST00000627241	UPF3B	Q9BZI7	483 aa	Known RBP	13.97	□□□□□ -0.17
RBM12B-208	ENST00000627241	TMOD3	Q9NYL9	352 aa		13.97	□□□□□ -0.17
RBM12B-208	ENST00000627241	TJP1	Q07157	1748 aa		13.97	□□□□□ -0.17
RBM12B-208	ENST00000627241	NUP188	Q5SRE5	1749 aa		13.97	□□□□□ -0.17
RBM12B-208	ENST00000627241	RAB11FIP3	O75154	756 aa		13.96	□□□□□ -0.17
RBM12B-208	ENST00000627241	PTPN12	Q05209	780 aa	Known RBP	13.96	□□□□□ -0.17
RBM12B-208	ENST00000627241	SLFNL1	Q499Z3	407 aa		13.96	□□□□□ -0.17
RBM12B-208	ENST00000627241		K7ELQ4	463 aa	Predicted RBP	13.96	□□□□□ -0.17
RBM12B-208	ENST00000627241	TNS2	Q63HR2	1409 aa		13.96	□□□□□ -0.17
RBM12B-208	ENST00000627241	CPA1	P15085	419 aa		13.95	□□□□□ -0.18
RBM12B-208	ENST00000627241	LMBR1L	Q6UX01	489 aa		13.95	□□□□□ -0.18
RBM12B-208	ENST00000627241	PLBD2	Q8NHP8	589 aa		13.95	□□□□□ -0.18
RBM12B-208	ENST00000627241	ACSBG1	Q96GR2	724 aa		13.95	□□□□□ -0.18
RBM12B-208	ENST00000627241	DISP2	A7MBM2	1401 aa		13.95	□□□□□ -0.18
RBM12B-208	ENST00000627241	BOLA2	Q9H3K6	86 aa		13.95	□□□□□ -0.18
RBM12B-208	ENST00000627241	FOXO4	P98177	505 aa		13.94	□□□□□ -0.18
RBM12B-208	ENST00000627241	TFCP2	Q12800	502 aa		13.94	□□□□□ -0.18
RBM12B-208	ENST00000627241	HLF	Q16534	295 aa		13.94	□□□□□ -0.18
RBM12B-208	ENST00000627241	CHMP3	Q9Y3E7	222 aa		13.94	□□□□□ -0.18
RBM12B-208	ENST00000627241	PRIM1	P49642	420 aa	Known RBP	13.94	□□□□□ -0.18
RBM12B-208	ENST00000627241	SMIM5	Q71RC9	77 aa		13.94	□□□□□ -0.18
RBM12B-208	ENST00000627241	RASEF	Q8IZ41	740 aa		13.94	□□□□□ -0.18
RBM12B-208	ENST00000627241	CLASRP	Q8N2M8	674 aa	Known RBP	13.94	□□□□□ -0.18
RBM12B-208	ENST00000627241	FAM227B	Q96M60	508 aa		13.94	□□□□□ -0.18
RBM12B-208	ENST00000627241	KCNQ4	P56696	695 aa		13.94	□□□□□ -0.18
RBM12B-208	ENST00000627241	PTH1R	Q03431	593 aa		13.94	□□□□□ -0.18
RBM12B-208	ENST00000627241	PUS3	Q9BZE2	481 aa	Known RBP	13.94	□□□□□ -0.18
RBM12B-208	ENST00000627241	TAF6L	Q9Y6J9	622 aa		13.94	□□□□□ -0.18
RBM12B-208	ENST00000627241	GPT	P24298	496 aa		13.93	□□□□□ -0.18
RBM12B-208	ENST00000627241	SSFA2	P28290	1259 aa		13.93	□□□□□ -0.18
RBM12B-208	ENST00000627241	PTF1A	Q7RTS3	328 aa		13.93	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms