RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 PRPF40BQ6NWY9 871 aaKnown RBP22.5■■□□□ 1.19
TARDBP-225ENST00000621715 MCM10Q7L590 875 aa22.5■■□□□ 1.19
TARDBP-225ENST00000621715 DZIP3Q86Y13 1208 aaKnown RBP22.5■■□□□ 1.19
TARDBP-225ENST00000621715 SETDB2Q96T68 719 aa22.5■■□□□ 1.19
TARDBP-225ENST00000621715 DCTN1Q14203 1278 aa22.49■■□□□ 1.19
TARDBP-225ENST00000621715 NBPF26B4DH59 902 aa22.48■■□□□ 1.19
TARDBP-225ENST00000621715 DDNO94850 711 aaPredicted RBP22.48■■□□□ 1.19
TARDBP-225ENST00000621715 NBPF10Q6P3W6 841 aaKnown RBP22.48■■□□□ 1.19
TARDBP-225ENST00000621715 NBPF15Q8N660 670 aa22.48■■□□□ 1.19
TARDBP-225ENST00000621715 TAOK3Q9H2K8 898 aa22.48■■□□□ 1.19
TARDBP-225ENST00000621715 LTBP3Q9NS15 1303 aa22.48■■□□□ 1.19
TARDBP-225ENST00000621715 STYK1Q6J9G0 422 aa22.47■■□□□ 1.19
TARDBP-225ENST00000621715 OLFM4Q6UX06 510 aa22.47■■□□□ 1.19
TARDBP-225ENST00000621715 C7orf43Q8WVR3 580 aa22.47■■□□□ 1.19
TARDBP-225ENST00000621715 PDZRN3Q9UPQ7 1066 aa22.47■■□□□ 1.19
TARDBP-225ENST00000621715 CNKSR1Q969H4 720 aa22.45■■□□□ 1.18
TARDBP-225ENST00000621715 HSPA1AP0DMV8 641 aaKnown RBP22.44■■□□□ 1.18
TARDBP-225ENST00000621715 HSPA1BP0DMV9 641 aaKnown RBP22.44■■□□□ 1.18
TARDBP-225ENST00000621715 PPP2R1AP30153 589 aa22.44■■□□□ 1.18
TARDBP-225ENST00000621715 ST5P78524 1137 aa22.44■■□□□ 1.18
TARDBP-225ENST00000621715 DPY19L2Q6NUT2 758 aa22.44■■□□□ 1.18
TARDBP-225ENST00000621715 MASTLQ96GX5 879 aa22.44■■□□□ 1.18
TARDBP-225ENST00000621715 NPHP1O15259 732 aa22.42■■□□□ 1.18
TARDBP-225ENST00000621715 SNRPA1P09661 255 aaKnown RBP22.42■■□□□ 1.18
TARDBP-225ENST00000621715 U2AF1L5P0DN76 240 aaPredicted RBP22.42■■□□□ 1.18
TARDBP-225ENST00000621715 U2AF1Q01081 240 aaKnown RBP eCLIP22.42■■□□□ 1.183e-7■■■□□ 15.3
TARDBP-225ENST00000621715 NBPF5PQ86XG9 351 aaPredicted RBP22.42■■□□□ 1.18
TARDBP-225ENST00000621715 MIS18AQ9NYP9 233 aa22.42■■□□□ 1.18
TARDBP-225ENST00000621715 DLG5Q8TDM6 1919 aa22.41■■□□□ 1.18
TARDBP-225ENST00000621715 CAPN15O75808 1086 aa22.41■■□□□ 1.18
TARDBP-225ENST00000621715 HLFQ16534 295 aa22.41■■□□□ 1.18
TARDBP-225ENST00000621715 LAMB4A4D0S4 1761 aa22.4■■□□□ 1.18
TARDBP-225ENST00000621715 KLRG2A4D1S0 409 aaPredicted RBP22.4■■□□□ 1.18
TARDBP-225ENST00000621715 CHADLQ6NUI6 762 aa22.4■■□□□ 1.18
TARDBP-225ENST00000621715 CLEC4GQ6UXB4 293 aa22.4■■□□□ 1.18
TARDBP-225ENST00000621715 CFAP53Q96M91 514 aa22.4■■□□□ 1.18
TARDBP-225ENST00000621715 ZNF541Q9H0D2 1346 aa22.39■■□□□ 1.18
TARDBP-225ENST00000621715 FAM177BA6PVY3 158 aa22.39■■□□□ 1.17
TARDBP-225ENST00000621715 NPM2Q86SE8 214 aaKnown RBP22.39■■□□□ 1.17
TARDBP-225ENST00000621715 SLC51AQ86UW1 340 aa22.39■■□□□ 1.17
TARDBP-225ENST00000621715 TNS4Q8IZW8 715 aa22.39■■□□□ 1.17
TARDBP-225ENST00000621715 NIP7Q9Y221 180 aaKnown RBP eCLIP22.39■■□□□ 1.17
TARDBP-225ENST00000621715 ZNF277Q9NRM2 450 aaPredicted RBP22.38■■□□□ 1.17
TARDBP-225ENST00000621715 MKRN1Q9UHC7 482 aaKnown RBP22.38■■□□□ 1.17
TARDBP-225ENST00000621715 SNED1Q8TER0 1413 aa22.38■■□□□ 1.17
TARDBP-225ENST00000621715 SCN4AP35499 1836 aa22.38■■□□□ 1.17
TARDBP-225ENST00000621715 KDM3BQ7LBC6 1761 aa22.38■■□□□ 1.17
TARDBP-225ENST00000621715 NPR1P16066 1061 aa22.37■■□□□ 1.17
TARDBP-225ENST00000621715 RTF1Q92541 710 aaKnown RBP22.37■■□□□ 1.17
TARDBP-225ENST00000621715 ABCC12Q96J65 1359 aa22.37■■□□□ 1.17
TARDBP-225ENST00000621715 COL4A5P29400 1685 aa22.36■■□□□ 1.17
TARDBP-225ENST00000621715 NUP98P52948 1817 aa22.36■■□□□ 1.17
TARDBP-225ENST00000621715 ADAMTSL1Q8N6G6 1762 aa22.36■■□□□ 1.17
TARDBP-225ENST00000621715 CCDC93Q567U6 631 aa22.36■■□□□ 1.17
TARDBP-225ENST00000621715 L3MBTL3Q96JM7 780 aaPredicted RBP22.36■■□□□ 1.17
TARDBP-225ENST00000621715 TAF1DQ9H5J8 278 aaPredicted RBP22.36■■□□□ 1.17
TARDBP-225ENST00000621715 NUDCQ9Y266 331 aa22.36■■□□□ 1.17
TARDBP-225ENST00000621715 PASKQ96RG2 1323 aa22.35■■□□□ 1.17
TARDBP-225ENST00000621715 SOGA3Q5TF21 947 aa22.35■■□□□ 1.17
TARDBP-225ENST00000621715 CREBZFQ9NS37 354 aa22.35■■□□□ 1.17
TARDBP-225ENST00000621715 ZNF652Q9Y2D9 606 aa22.35■■□□□ 1.17
TARDBP-225ENST00000621715 FKBP4Q02790 459 aaKnown RBP eCLIP22.34■■□□□ 1.17
TARDBP-225ENST00000621715 TAF7Q15545 349 aaPredicted RBP22.33■■□□□ 1.17
TARDBP-225ENST00000621715 TPTE2Q6XPS3 522 aa22.33■■□□□ 1.17
TARDBP-225ENST00000621715 HTATSF1O43719 755 aaKnown RBP22.32■■□□□ 1.16
TARDBP-225ENST00000621715 NUTM1Q86Y26 1132 aa22.32■■□□□ 1.16
TARDBP-225ENST00000621715 NGEFQ8N5V2 710 aa22.32■■□□□ 1.16
TARDBP-225ENST00000621715 THUMPD2Q9BTF0 503 aaKnown RBP22.32■■□□□ 1.16
TARDBP-225ENST00000621715 ITGBL1O95965 494 aaPredicted RBP22.31■■□□□ 1.16
TARDBP-225ENST00000621715 LDHDQ86WU2 507 aa22.31■■□□□ 1.16
TARDBP-225ENST00000621715 LTBP1Q14766 1721 aa22.31■■□□□ 1.16
TARDBP-225ENST00000621715 CNTNAP1P78357 1384 aa22.3■■□□□ 1.16
TARDBP-225ENST00000621715 RGL2O15211 777 aa22.3■■□□□ 1.16
TARDBP-225ENST00000621715 TTLL7Q6ZT98 887 aa22.3■■□□□ 1.16
TARDBP-225ENST00000621715 CRY2Q49AN0 593 aa22.29■■□□□ 1.16
TARDBP-225ENST00000621715 SYNE4Q8N205 404 aa22.29■■□□□ 1.16
TARDBP-225ENST00000621715 PLEKHF1Q96S99 279 aa22.29■■□□□ 1.16
TARDBP-225ENST00000621715 UBN2Q6ZU65 1347 aa22.29■■□□□ 1.16
TARDBP-225ENST00000621715 IQCA1LA6NCM1 817 aa22.28■■□□□ 1.16
TARDBP-225ENST00000621715 FZD9O00144 591 aa22.28■■□□□ 1.16
TARDBP-225ENST00000621715 IARSP41252 1262 aaKnown RBP22.28■■□□□ 1.16
TARDBP-225ENST00000621715 EAPPQ56P03 285 aaPredicted RBP22.28■■□□□ 1.16
TARDBP-225ENST00000621715 RNF123Q5XPI4 1314 aa22.28■■□□□ 1.16
TARDBP-225ENST00000621715 FOXN1O15353 648 aa22.27■■□□□ 1.16
TARDBP-225ENST00000621715 EIF4A1P60842 406 aaKnown RBP22.27■■□□□ 1.16
TARDBP-225ENST00000621715 C3orf67Q6ZVT6 689 aa22.27■■□□□ 1.16
TARDBP-225ENST00000621715 EPHX2P34913 555 aa22.26■■□□□ 1.15
TARDBP-225ENST00000621715 RTKN2Q8IZC4 609 aa22.26■■□□□ 1.15
TARDBP-225ENST00000621715 MAP3K15Q6ZN16 1313 aa22.26■■□□□ 1.15
TARDBP-225ENST00000621715 GPTP24298 496 aa22.25■■□□□ 1.15
TARDBP-225ENST00000621715 VEGFBP49765 207 aa22.25■■□□□ 1.15
TARDBP-225ENST00000621715 HACL1Q9UJ83 578 aa22.25■■□□□ 1.15
TARDBP-225ENST00000621715 RRP7AQ9Y3A4 280 aaKnown RBP22.25■■□□□ 1.15
TARDBP-225ENST00000621715 MYL6BP14649 208 aa22.24■■□□□ 1.15
TARDBP-225ENST00000621715 SUSD4Q5VX71 490 aa22.24■■□□□ 1.15
TARDBP-225ENST00000621715 MAP1SQ66K74 1059 aaPredicted RBP22.24■■□□□ 1.15
TARDBP-225ENST00000621715 ZBTB3Q9H5J0 574 aa22.24■■□□□ 1.15
TARDBP-225ENST00000621715 ERVV-1B6SEH8 477 aa22.23■■□□□ 1.15
TARDBP-225ENST00000621715 GTF2E1P29083 439 aaPredicted RBP22.23■■□□□ 1.15
TARDBP-225ENST00000621715 ALDH1B1P30837 517 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms