RNA–Protein interactions for RNA: ENST00000602272.5

FARP1-241, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-241ENST00000602272 WWC1Q8IX03 1113 aa10.16□□□□□ -0.78
FARP1-241ENST00000602272 NANOS1Q8WY41 292 aaKnown RBP10.16□□□□□ -0.78
FARP1-241ENST00000602272 RPRD2Q5VT52 1461 aaKnown RBP10.16□□□□□ -0.78
FARP1-241ENST00000602272 UHRF1BP1Q6BDS2 1440 aa10.16□□□□□ -0.78
FARP1-241ENST00000602272 NUP155O75694 1391 aa10.15□□□□□ -0.78
FARP1-241ENST00000602272 NR1H3Q13133 447 aa10.15□□□□□ -0.78
FARP1-241ENST00000602272 WASHC4Q2M389 1173 aa10.15□□□□□ -0.78
FARP1-241ENST00000602272 SEPT12Q8IYM1 358 aa10.15□□□□□ -0.78
FARP1-241ENST00000602272 ZNF330Q9Y3S2 320 aaPredicted RBP10.15□□□□□ -0.78
FARP1-241ENST00000602272 TNRQ92752 1358 aa10.14□□□□□ -0.79
FARP1-241ENST00000602272 CEP170BQ9Y4F5 1589 aaPredicted RBP10.14□□□□□ -0.79
FARP1-241ENST00000602272 POM121CA8CG34 1229 aa10.14□□□□□ -0.79
FARP1-241ENST00000602272 RELBQ01201 579 aa10.14□□□□□ -0.79
FARP1-241ENST00000602272 CCDC155Q8N6L0 562 aa10.14□□□□□ -0.79
FARP1-241ENST00000602272 SYNMO15061 1565 aa10.14□□□□□ -0.79
FARP1-241ENST00000602272 CCDC125Q86Z20 511 aa10.13□□□□□ -0.79
FARP1-241ENST00000602272 SETD1BQ9UPS6 1966 aaKnown RBP10.13□□□□□ -0.79
FARP1-241ENST00000602272 NOS1P29475 1434 aa10.13□□□□□ -0.79
FARP1-241ENST00000602272 SPHKAPQ2M3C7 1700 aa10.13□□□□□ -0.79
FARP1-241ENST00000602272 RAB3GAP2Q9H2M9 1393 aa10.13□□□□□ -0.79
FARP1-241ENST00000602272 A2ML1A8K2U0 1454 aa10.12□□□□□ -0.79
FARP1-241ENST00000602272 NLRP1Q9C000 1473 aa10.12□□□□□ -0.79
FARP1-241ENST00000602272 SLC35F4A4IF30 521 aa10.12□□□□□ -0.79
FARP1-241ENST00000602272 AGBL1Q96MI9 1066 aa10.12□□□□□ -0.79
FARP1-241ENST00000602272 POLMQ9NP87 494 aaPredicted RBP10.12□□□□□ -0.79
FARP1-241ENST00000602272 CFAP65Q6ZU64 1925 aaKnown RBP10.11□□□□□ -0.79
FARP1-241ENST00000602272 PIK3C2BO00750 1634 aa10.11□□□□□ -0.79
FARP1-241ENST00000602272 ESPNB1AK53 854 aa10.11□□□□□ -0.79
FARP1-241ENST00000602272 ADH1AP07327 375 aa10.11□□□□□ -0.79
FARP1-241ENST00000602272 CTSOP43234 321 aaPredicted RBP10.11□□□□□ -0.79
FARP1-241ENST00000602272 ZNF784Q8NCA9 323 aaPredicted RBP10.11□□□□□ -0.79
FARP1-241ENST00000602272 INSM2Q96T92 566 aaPredicted RBP10.11□□□□□ -0.79
FARP1-241ENST00000602272 UBR1Q8IWV7 1749 aa10.1□□□□□ -0.79
FARP1-241ENST00000602272 ACIN1Q9UKV3 1341 aaKnown RBP10.1□□□□□ -0.79
FARP1-241ENST00000602272 KDM5AP29375 1690 aaKnown RBP10.1□□□□□ -0.79
FARP1-241ENST00000602272 ERVH48-1M5A8F1 160 aa10.1□□□□□ -0.79
FARP1-241ENST00000602272 TRIM26Q12899 539 aaPredicted RBP10.1□□□□□ -0.79
FARP1-241ENST00000602272 ITGA6P23229 1130 aa10.09□□□□□ -0.79
FARP1-241ENST00000602272 PTGIRP43119 386 aa10.09□□□□□ -0.79
FARP1-241ENST00000602272 RAB15P59190 212 aa10.09□□□□□ -0.79
FARP1-241ENST00000602272 ADAMTS19Q8TE59 1207 aa10.09□□□□□ -0.79
FARP1-241ENST00000602272 ZNF592Q92610 1267 aa10.09□□□□□ -0.79
FARP1-241ENST00000602272 CNTNAP3BQ96NU0 1288 aa10.09□□□□□ -0.79
FARP1-241ENST00000602272 CNTNAP3Q9BZ76 1288 aa10.09□□□□□ -0.79
FARP1-241ENST00000602272 TMPRSS4Q9NRS4 437 aa10.09□□□□□ -0.79
FARP1-241ENST00000602272 UGGT1Q9NYU2 1555 aa10.09□□□□□ -0.79
FARP1-241ENST00000602272 TRPM2O94759 1503 aa10.08□□□□□ -0.8
FARP1-241ENST00000602272 SV2AQ7L0J3 742 aa10.08□□□□□ -0.8
FARP1-241ENST00000602272 GPR161Q8N6U8 529 aaKnown RBP10.08□□□□□ -0.8
FARP1-241ENST00000602272 RNF217Q8TC41 542 aa10.08□□□□□ -0.8
FARP1-241ENST00000602272 COL25A1Q9BXS0 654 aaPredicted RBP10.08□□□□□ -0.8
FARP1-241ENST00000602272 ZNF395Q9H8N7 513 aaPredicted RBP10.08□□□□□ -0.8
FARP1-241ENST00000602272 PTPRTO14522 1441 aa10.07□□□□□ -0.8
FARP1-241ENST00000602272 ADGRB3O60242 1522 aa10.07□□□□□ -0.8
FARP1-241ENST00000602272 STRCQ7RTU9 1775 aa10.07□□□□□ -0.8
FARP1-241ENST00000602272 PLA2R1Q13018 1463 aa10.07□□□□□ -0.8
FARP1-241ENST00000602272 LILRA1O75019 489 aa10.07□□□□□ -0.8
FARP1-241ENST00000602272 HSPA2P54652 639 aa10.07□□□□□ -0.8
FARP1-241ENST00000602272 MCCD1P59942 119 aaPredicted RBP10.07□□□□□ -0.8
FARP1-241ENST00000602272 EIF4G2P78344 907 aaKnown RBP eCLIP10.07□□□□□ -0.8
FARP1-241ENST00000602272 ALG2Q9H553 416 aa10.07□□□□□ -0.8
FARP1-241ENST00000602272 C1orf115Q9H7X2 142 aa10.07□□□□□ -0.8
FARP1-241ENST00000602272 SOX11P35716 441 aa10.06□□□□□ -0.8
FARP1-241ENST00000602272 POLR1AO95602 1720 aaPredicted RBP10.06□□□□□ -0.8
FARP1-241ENST00000602272 TMEM131LA2VDJ0 1609 aa10.06□□□□□ -0.8
FARP1-241ENST00000602272 CLTCL1P53675 1640 aa10.06□□□□□ -0.8
FARP1-241ENST00000602272 RNF225M0QZC1 329 aaPredicted RBP10.05□□□□□ -0.8
FARP1-241ENST00000602272 ADD1P35611 737 aaKnown RBP10.05□□□□□ -0.8
FARP1-241ENST00000602272 KRT76Q01546 638 aa10.05□□□□□ -0.8
FARP1-241ENST00000602272 KCNMA1Q12791 1236 aa10.05□□□□□ -0.8
FARP1-241ENST00000602272 RNF20Q5VTR2 975 aa10.05□□□□□ -0.8
FARP1-241ENST00000602272 GLMNQ92990 594 aa10.05□□□□□ -0.8
FARP1-241ENST00000602272 MPHOSPH9Q99550 1183 aa10.05□□□□□ -0.8
FARP1-241ENST00000602272 SLC52A1Q9NWF4 448 aa10.05□□□□□ -0.8
FARP1-241ENST00000602272 PCDHB9Q9Y5E1 797 aa10.05□□□□□ -0.8
FARP1-241ENST00000602272 MYO5BQ9ULV0 1848 aa10.05□□□□□ -0.8
FARP1-241ENST00000602272 CDC14CA4D256 554 aa10.04□□□□□ -0.8
FARP1-241ENST00000602272 IDI1Q13907 227 aa10.04□□□□□ -0.8
FARP1-241ENST00000602272 HDGFL1Q5TGJ6 251 aa10.04□□□□□ -0.8
FARP1-241ENST00000602272 LYSMD3Q7Z3D4 306 aa10.04□□□□□ -0.8
FARP1-241ENST00000602272 VWA5B2Q8N398 1253 aa10.04□□□□□ -0.8
FARP1-241ENST00000602272 ARHGAP23Q9P227 1491 aa10.04□□□□□ -0.8
FARP1-241ENST00000602272 SLIT1O75093 1534 aa10.03□□□□□ -0.8
FARP1-241ENST00000602272 SEMA3FQ13275 785 aa10.03□□□□□ -0.8
FARP1-241ENST00000602272 KIF1BO60333 1816 aa10.03□□□□□ -0.8
FARP1-241ENST00000602272 NEURL4Q96JN8 1562 aa10.02□□□□□ -0.81
FARP1-241ENST00000602272 RNF144AP50876 292 aaPredicted RBP10.02□□□□□ -0.81
FARP1-241ENST00000602272 THEMISQ8N1K5 641 aaPredicted RBP10.02□□□□□ -0.81
FARP1-241ENST00000602272 CYLDQ9NQC7 956 aa10.02□□□□□ -0.81
FARP1-241ENST00000602272 ATP5J2-PTCD1G3V325 749 aa10.01□□□□□ -0.81
FARP1-241ENST00000602272 SLURP2P0DP57 97 aa10.01□□□□□ -0.81
FARP1-241ENST00000602272 GPC1P35052 558 aa10.01□□□□□ -0.81
FARP1-241ENST00000602272 FOXD4L5Q5VV16 416 aaPredicted RBP10.01□□□□□ -0.81
FARP1-241ENST00000602272 KDF1Q8NAX2 398 aaPredicted RBP10.01□□□□□ -0.81
FARP1-241ENST00000602272 GMCL1Q96IK5 515 aa10.01□□□□□ -0.81
FARP1-241ENST00000602272 CALR3Q96L12 384 aaKnown RBP10.01□□□□□ -0.81
FARP1-241ENST00000602272 SENP3-EIF4A1A0A087X0R7 540 aa10□□□□□ -0.81
FARP1-241ENST00000602272 CEP126Q9P2H0 1117 aa10□□□□□ -0.81
FARP1-241ENST00000602272 ADAMTS8Q9UP79 889 aa10□□□□□ -0.81
FARP1-241ENST00000602272 TMEM2Q9UHN6 1383 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms