RNA–Protein interactions for RNA: ENST00000589737.5

POLR2E-206, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 1,105 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-206ENST00000589737 NPM2Q86SE8 214 aaKnown RBP20.21■□□□□ 0.83
POLR2E-206ENST00000589737 NUP98P52948 1817 aa20.2■□□□□ 0.82
POLR2E-206ENST00000589737 ST5P78524 1137 aa20.2■□□□□ 0.82
POLR2E-206ENST00000589737 STYK1Q6J9G0 422 aa20.2■□□□□ 0.82
POLR2E-206ENST00000589737 TAOK3Q9H2K8 898 aa20.2■□□□□ 0.82
POLR2E-206ENST00000589737 ZNF219Q9P2Y4 722 aaPredicted RBP20.2■□□□□ 0.82
POLR2E-206ENST00000589737 USP16Q9Y5T5 823 aa20.2■□□□□ 0.82
POLR2E-206ENST00000589737 PRAMEF22A3QJZ6 481 aa20.19■□□□□ 0.82
POLR2E-206ENST00000589737 SRGNP10124 158 aa20.19■□□□□ 0.82
POLR2E-206ENST00000589737 PIP4K2AP48426 406 aaPredicted RBP20.19■□□□□ 0.82
POLR2E-206ENST00000589737 ERFEQ4G0M1 354 aa20.19■□□□□ 0.82
POLR2E-206ENST00000589737 PRPF40BQ6NWY9 871 aaKnown RBP20.19■□□□□ 0.82
POLR2E-206ENST00000589737 CNKSR1Q969H4 720 aa20.19■□□□□ 0.82
POLR2E-206ENST00000589737 DPY19L2Q6NUT2 758 aa20.18■□□□□ 0.82
POLR2E-206ENST00000589737 NUDCQ9Y266 331 aa20.18■□□□□ 0.82
POLR2E-206ENST00000589737 NPHP1O15259 732 aa20.17■□□□□ 0.82
POLR2E-206ENST00000589737 PPP2R1AP30153 589 aa20.17■□□□□ 0.82
POLR2E-206ENST00000589737 CLEC4GQ6UXB4 293 aa20.17■□□□□ 0.82
POLR2E-206ENST00000589737 MCM10Q7L590 875 aa20.17■□□□□ 0.82
POLR2E-206ENST00000589737 MASTLQ96GX5 879 aa20.17■□□□□ 0.82
POLR2E-206ENST00000589737 SNRPA1P09661 255 aaKnown RBP20.16■□□□□ 0.82
POLR2E-206ENST00000589737 U2AF1L5P0DN76 240 aaPredicted RBP20.16■□□□□ 0.82
POLR2E-206ENST00000589737 U2AF1Q01081 240 aaKnown RBP eCLIP20.16■□□□□ 0.82
POLR2E-206ENST00000589737 SOGA3Q5TF21 947 aa20.16■□□□□ 0.82
POLR2E-206ENST00000589737 RTF1Q92541 710 aaKnown RBP20.16■□□□□ 0.82
POLR2E-206ENST00000589737 RGL2O15211 777 aa20.15■□□□□ 0.82
POLR2E-206ENST00000589737 NBPF5PQ86XG9 351 aaPredicted RBP20.15■□□□□ 0.82
POLR2E-206ENST00000589737 ZNF652Q9Y2D9 606 aa20.15■□□□□ 0.82
POLR2E-206ENST00000589737 NBPF26B4DH59 902 aa20.14■□□□□ 0.81
POLR2E-206ENST00000589737 COL13A1Q5TAT6 717 aaPredicted RBP20.14■□□□□ 0.81
POLR2E-206ENST00000589737 NBPF10Q6P3W6 841 aaKnown RBP20.14■□□□□ 0.81
POLR2E-206ENST00000589737 NBPF15Q8N660 670 aa20.14■□□□□ 0.81
POLR2E-206ENST00000589737 ADAMTSL1Q8N6G6 1762 aa20.13■□□□□ 0.81
POLR2E-206ENST00000589737 HTATSF1O43719 755 aaKnown RBP20.13■□□□□ 0.81
POLR2E-206ENST00000589737 DCTN1Q14203 1278 aa20.13■□□□□ 0.81
POLR2E-206ENST00000589737 C7orf43Q8WVR3 580 aa20.13■□□□□ 0.81
POLR2E-206ENST00000589737 KLRG2A4D1S0 409 aaPredicted RBP20.12■□□□□ 0.81
POLR2E-206ENST00000589737 DDNO94850 711 aaPredicted RBP20.11■□□□□ 0.81
POLR2E-206ENST00000589737 NPR1P16066 1061 aa20.11■□□□□ 0.81
POLR2E-206ENST00000589737 CCDC93Q567U6 631 aa20.11■□□□□ 0.81
POLR2E-206ENST00000589737 NIP7Q9Y221 180 aaKnown RBP eCLIP20.11■□□□□ 0.81
POLR2E-206ENST00000589737 SNED1Q8TER0 1413 aa20.1■□□□□ 0.81
POLR2E-206ENST00000589737 POTEIP0CG38 1075 aa20.09■□□□□ 0.81
POLR2E-206ENST00000589737 POTEJP0CG39 1038 aa20.09■□□□□ 0.81
POLR2E-206ENST00000589737 CHADLQ6NUI6 762 aa20.09■□□□□ 0.81
POLR2E-206ENST00000589737 L3MBTL3Q96JM7 780 aaPredicted RBP20.09■□□□□ 0.81
POLR2E-206ENST00000589737 HSPA1AP0DMV8 641 aaKnown RBP20.08■□□□□ 0.81
POLR2E-206ENST00000589737 HSPA1BP0DMV9 641 aaKnown RBP20.08■□□□□ 0.81
POLR2E-206ENST00000589737 TPTE2Q6XPS3 522 aa20.08■□□□□ 0.81
POLR2E-206ENST00000589737 FKBP4Q02790 459 aaKnown RBP eCLIP20.07■□□□□ 0.8
POLR2E-206ENST00000589737 TAF7Q15545 349 aaPredicted RBP20.07■□□□□ 0.8
POLR2E-206ENST00000589737 CREBZFQ9NS37 354 aa20.07■□□□□ 0.8
POLR2E-206ENST00000589737 ABCC12Q96J65 1359 aa20.07■□□□□ 0.8
POLR2E-206ENST00000589737 IQCA1LA6NCM1 817 aa20.06■□□□□ 0.8
POLR2E-206ENST00000589737 HLFQ16534 295 aa20.06■□□□□ 0.8
POLR2E-206ENST00000589737 RIC1Q4ADV7 1423 aa20.06■□□□□ 0.8
POLR2E-206ENST00000589737 ZNF541Q9H0D2 1346 aa20.05■□□□□ 0.8
POLR2E-206ENST00000589737 OLFM4Q6UX06 510 aa20.05■□□□□ 0.8
POLR2E-206ENST00000589737 ANKRD36CQ5JPF3 1778 aa20.05■□□□□ 0.8
POLR2E-206ENST00000589737 PASKQ96RG2 1323 aa20.04■□□□□ 0.8
POLR2E-206ENST00000589737 FAM177BA6PVY3 158 aa20.04■□□□□ 0.8
POLR2E-206ENST00000589737 LDHDQ86WU2 507 aa20.04■□□□□ 0.8
POLR2E-206ENST00000589737 TAF1DQ9H5J8 278 aaPredicted RBP20.04■□□□□ 0.8
POLR2E-206ENST00000589737 ZNF277Q9NRM2 450 aaPredicted RBP20.04■□□□□ 0.8
POLR2E-206ENST00000589737 MIS18AQ9NYP9 233 aa20.04■□□□□ 0.8
POLR2E-206ENST00000589737 IBTKQ9P2D0 1353 aaPredicted RBP20.04■□□□□ 0.8
POLR2E-206ENST00000589737 CRY2Q49AN0 593 aa20.03■□□□□ 0.8
POLR2E-206ENST00000589737 TNS4Q8IZW8 715 aa20.03■□□□□ 0.8
POLR2E-206ENST00000589737 COL4A5P29400 1685 aa20.03■□□□□ 0.8
POLR2E-206ENST00000589737 LAMB2P55268 1798 aa20.03■□□□□ 0.8
POLR2E-206ENST00000589737 RTKN2Q8IZC4 609 aa20.02■□□□□ 0.8
POLR2E-206ENST00000589737 PNISRQ8TF01 805 aaKnown RBP20.02■□□□□ 0.8
POLR2E-206ENST00000589737 LTBP1Q14766 1721 aa20.02■□□□□ 0.79
POLR2E-206ENST00000589737 MAP3K15Q6ZN16 1313 aa20.02■□□□□ 0.79
POLR2E-206ENST00000589737 CNTNAP1P78357 1384 aa20.01■□□□□ 0.79
POLR2E-206ENST00000589737 ERVV-1B6SEH8 477 aa20.01■□□□□ 0.79
POLR2E-206ENST00000589737 PLEKHF1Q96S99 279 aa20.01■□□□□ 0.79
POLR2E-206ENST00000589737 NYXQ9GZU5 481 aa20.01■□□□□ 0.79
POLR2E-206ENST00000589737 NEFMP07197 916 aa20■□□□□ 0.79
POLR2E-206ENST00000589737 ALDH1B1P30837 517 aa20■□□□□ 0.79
POLR2E-206ENST00000589737 IARSP41252 1262 aaKnown RBP20■□□□□ 0.79
POLR2E-206ENST00000589737 EIF4A1P60842 406 aaKnown RBP20■□□□□ 0.79
POLR2E-206ENST00000589737 MKRN1Q9UHC7 482 aaKnown RBP20■□□□□ 0.79
POLR2E-206ENST00000589737 UBN2Q6ZU65 1347 aa20■□□□□ 0.79
POLR2E-206ENST00000589737 TRPM7Q96QT4 1865 aa19.99■□□□□ 0.79
POLR2E-206ENST00000589737 FZD9O00144 591 aa19.99■□□□□ 0.79
POLR2E-206ENST00000589737 GTF2E1P29083 439 aaPredicted RBP19.99■□□□□ 0.79
POLR2E-206ENST00000589737 NFE2L2Q16236 605 aa19.99■□□□□ 0.79
POLR2E-206ENST00000589737 NUTM1Q86Y26 1132 aa19.99■□□□□ 0.79
POLR2E-206ENST00000589737 PSMD1Q99460 953 aa19.99■□□□□ 0.79
POLR2E-206ENST00000589737 KIF6Q6ZMV9 814 aa19.98■□□□□ 0.79
POLR2E-206ENST00000589737 TTLL7Q6ZT98 887 aa19.98■□□□□ 0.79
POLR2E-206ENST00000589737 SYNE4Q8N205 404 aa19.98■□□□□ 0.79
POLR2E-206ENST00000589737 NGEFQ8N5V2 710 aa19.98■□□□□ 0.79
POLR2E-206ENST00000589737 THUMPD2Q9BTF0 503 aaKnown RBP19.98■□□□□ 0.79
POLR2E-206ENST00000589737 HACL1Q9UJ83 578 aa19.98■□□□□ 0.79
POLR2E-206ENST00000589737 ERBB4Q15303 1308 aa19.97■□□□□ 0.79
POLR2E-206ENST00000589737 RNF123Q5XPI4 1314 aa19.97■□□□□ 0.79
POLR2E-206ENST00000589737 CAPN15O75808 1086 aa19.96■□□□□ 0.79
POLR2E-206ENST00000589737 ITGBL1O95965 494 aaPredicted RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms