RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 NCAPGQ9BPX3 1015 aa6.9□□□□□ -1.3
LINC01538-201ENST00000588074 FAM13AO94988 1023 aa6.9□□□□□ -1.31
LINC01538-201ENST00000588074 HSP90AB4PQ58FF6 505 aa6.9□□□□□ -1.31
LINC01538-201ENST00000588074 POGKQ9P215 609 aa6.9□□□□□ -1.31
LINC01538-201ENST00000588074 UQCRHLA0A096LP55 91 aa6.89□□□□□ -1.31
LINC01538-201ENST00000588074 UQCRHP07919 91 aa6.89□□□□□ -1.31
LINC01538-201ENST00000588074 EIF1AXP47813 144 aaKnown RBP6.89□□□□□ -1.31
LINC01538-201ENST00000588074 FAM26DQ5JW98 314 aa6.89□□□□□ -1.31
LINC01538-201ENST00000588074 RNPC3Q96LT9 517 aaKnown RBP6.89□□□□□ -1.31
LINC01538-201ENST00000588074 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.89□□□□□ -1.31
LINC01538-201ENST00000588074 CYLDQ9NQC7 956 aa6.89□□□□□ -1.31
LINC01538-201ENST00000588074 SMC4Q9NTJ3 1288 aa6.89□□□□□ -1.31
LINC01538-201ENST00000588074 DDX56Q9NY93 547 aaKnown RBP6.89□□□□□ -1.31
LINC01538-201ENST00000588074 SEPT9Q9UHD8 586 aaPredicted RBP6.89□□□□□ -1.31
LINC01538-201ENST00000588074 CFAP65Q6ZU64 1925 aaKnown RBP6.89□□□□□ -1.31
LINC01538-201ENST00000588074 PNMA6FA0A0J9YX94 578 aa6.89□□□□□ -1.31
LINC01538-201ENST00000588074 U2SURPO15042 1029 aaKnown RBP6.89□□□□□ -1.31
LINC01538-201ENST00000588074 KIF1CO43896 1103 aaKnown RBP6.89□□□□□ -1.31
LINC01538-201ENST00000588074 PTCD1O75127 700 aaKnown RBP6.89□□□□□ -1.31
LINC01538-201ENST00000588074 SEC24BO95487 1268 aa6.89□□□□□ -1.31
LINC01538-201ENST00000588074 AMPD3Q01432 767 aa6.89□□□□□ -1.31
LINC01538-201ENST00000588074 SERINC3Q13530 473 aa6.89□□□□□ -1.31
LINC01538-201ENST00000588074 APBB1IPQ7Z5R6 666 aaPredicted RBP6.89□□□□□ -1.31
LINC01538-201ENST00000588074 MORC4Q8TE76 937 aa6.89□□□□□ -1.31
LINC01538-201ENST00000588074 FAM129BQ96TA1 746 aa6.89□□□□□ -1.31
LINC01538-201ENST00000588074 BRINP2Q9C0B6 783 aa6.89□□□□□ -1.31
LINC01538-201ENST00000588074 LHX6Q9UPM6 363 aa6.89□□□□□ -1.31
LINC01538-201ENST00000588074 XRCC5P13010 732 aaKnown RBP6.88□□□□□ -1.31
LINC01538-201ENST00000588074 MORN1Q5T089 497 aa6.88□□□□□ -1.31
LINC01538-201ENST00000588074 ZSCAN30Q86W11 494 aa6.88□□□□□ -1.31
LINC01538-201ENST00000588074 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.88□□□□□ -1.31
LINC01538-201ENST00000588074 CHMP4CQ96CF2 233 aa6.88□□□□□ -1.31
LINC01538-201ENST00000588074 NIF3L1Q9GZT8 377 aa6.88□□□□□ -1.31
LINC01538-201ENST00000588074 BRMS1Q9HCU9 246 aa6.88□□□□□ -1.31
LINC01538-201ENST00000588074 CALCOCO1Q9P1Z2 691 aa6.88□□□□□ -1.31
LINC01538-201ENST00000588074 KIF16BQ96L93 1317 aa6.88□□□□□ -1.31
LINC01538-201ENST00000588074 ATF4P18848 351 aaPredicted RBP6.88□□□□□ -1.31
LINC01538-201ENST00000588074 MZF1P28698 734 aaPredicted RBP6.88□□□□□ -1.31
LINC01538-201ENST00000588074 CTHP32929 405 aa6.88□□□□□ -1.31
LINC01538-201ENST00000588074 GABPB1Q06547 395 aaPredicted RBP6.88□□□□□ -1.31
LINC01538-201ENST00000588074 TSHZ1Q6ZSZ6 1077 aa6.88□□□□□ -1.31
LINC01538-201ENST00000588074 ATCAYQ86WG3 371 aa6.88□□□□□ -1.31
LINC01538-201ENST00000588074 TMTC2Q8N394 836 aa6.88□□□□□ -1.31
LINC01538-201ENST00000588074 KIAA1468Q9P260 1216 aa6.88□□□□□ -1.31
LINC01538-201ENST00000588074 NRDCO43847 1150 aa6.87□□□□□ -1.31
LINC01538-201ENST00000588074 GIGYF1O75420 1035 aaPredicted RBP6.87□□□□□ -1.31
LINC01538-201ENST00000588074 STAU1O95793 577 aaKnown RBP6.87□□□□□ -1.31
LINC01538-201ENST00000588074 CALRP27797 417 aaKnown RBP6.87□□□□□ -1.31
LINC01538-201ENST00000588074 CT47A1Q5JQC4 288 aaPredicted RBP6.87□□□□□ -1.31
LINC01538-201ENST00000588074 ZNF654Q8IZM8 581 aa6.87□□□□□ -1.31
LINC01538-201ENST00000588074 RNF217Q8TC41 542 aa6.87□□□□□ -1.31
LINC01538-201ENST00000588074 ENPP3O14638 875 aa6.87□□□□□ -1.31
LINC01538-201ENST00000588074 PTPREP23469 700 aa6.87□□□□□ -1.31
LINC01538-201ENST00000588074 HSP90AB2PQ58FF8 381 aa6.87□□□□□ -1.31
LINC01538-201ENST00000588074 FMNL3Q8IVF7 1028 aa6.87□□□□□ -1.31
LINC01538-201ENST00000588074 NKX2-3Q8TAU0 364 aa6.87□□□□□ -1.31
LINC01538-201ENST00000588074 ZCRB1Q8TBF4 217 aaKnown RBP6.87□□□□□ -1.31
LINC01538-201ENST00000588074 MRFAP1L1Q96HT8 127 aa6.87□□□□□ -1.31
LINC01538-201ENST00000588074 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.87□□□□□ -1.31
LINC01538-201ENST00000588074 RNF123Q5XPI4 1314 aa6.87□□□□□ -1.31
LINC01538-201ENST00000588074 ZBTB39O15060 712 aa6.86□□□□□ -1.31
LINC01538-201ENST00000588074 HNRNPUQ00839 825 aaKnown RBP eCLIP6.86□□□□□ -1.31
LINC01538-201ENST00000588074 PTK2Q05397 1052 aa6.86□□□□□ -1.31
LINC01538-201ENST00000588074 SETDB1Q15047 1291 aa6.86□□□□□ -1.31
LINC01538-201ENST00000588074 ENOX2Q16206 610 aaKnown RBP6.86□□□□□ -1.31
LINC01538-201ENST00000588074 CCDC96Q2M329 555 aa6.86□□□□□ -1.31
LINC01538-201ENST00000588074 SASS6Q6UVJ0 657 aa6.86□□□□□ -1.31
LINC01538-201ENST00000588074 ZNF771Q7L3S4 317 aaPredicted RBP6.86□□□□□ -1.31
LINC01538-201ENST00000588074 CCDC146Q8IYE0 955 aa6.86□□□□□ -1.31
LINC01538-201ENST00000588074 CRELD1Q96HD1 420 aa6.86□□□□□ -1.31
LINC01538-201ENST00000588074 GNA15P30679 374 aa6.86□□□□□ -1.31
LINC01538-201ENST00000588074 PAK2Q13177 524 aa6.86□□□□□ -1.31
LINC01538-201ENST00000588074 HS1BP3Q53T59 392 aa6.86□□□□□ -1.31
LINC01538-201ENST00000588074 MPNDQ8N594 471 aa6.86□□□□□ -1.31
LINC01538-201ENST00000588074 MNS1Q8NEH6 495 aa6.86□□□□□ -1.31
LINC01538-201ENST00000588074 DONSONQ9NYP3 566 aa6.86□□□□□ -1.31
LINC01538-201ENST00000588074 MRVI1Q9Y6F6 885 aa6.86□□□□□ -1.31
LINC01538-201ENST00000588074 DNAJC6O75061 913 aa6.85□□□□□ -1.31
LINC01538-201ENST00000588074 S100BP04271 92 aaPredicted RBP6.85□□□□□ -1.31
LINC01538-201ENST00000588074 MSNP26038 577 aaKnown RBP6.85□□□□□ -1.31
LINC01538-201ENST00000588074 GJA8P48165 433 aa6.85□□□□□ -1.31
LINC01538-201ENST00000588074 TBX4P57082 545 aa6.85□□□□□ -1.31
LINC01538-201ENST00000588074 FAM50AQ14320 339 aaKnown RBP6.85□□□□□ -1.31
LINC01538-201ENST00000588074 SOGA3Q5TF21 947 aa6.85□□□□□ -1.31
LINC01538-201ENST00000588074 PDXDC2PQ6P474 469 aa6.85□□□□□ -1.31
LINC01538-201ENST00000588074 RINLQ6ZS11 566 aa6.85□□□□□ -1.31
LINC01538-201ENST00000588074 MKL1Q969V6 931 aa6.85□□□□□ -1.31
LINC01538-201ENST00000588074 SPOCK3Q9BQ16 436 aa6.85□□□□□ -1.31
LINC01538-201ENST00000588074 PANK2Q9BZ23 570 aa6.85□□□□□ -1.31
LINC01538-201ENST00000588074 PCDH10Q9P2E7 1040 aa6.85□□□□□ -1.31
LINC01538-201ENST00000588074 TNFRSF10BO14763 440 aa6.85□□□□□ -1.31
LINC01538-201ENST00000588074 GTF2A1P52655 376 aaPredicted RBP6.85□□□□□ -1.31
LINC01538-201ENST00000588074 ATP2B2Q01814 1243 aa6.85□□□□□ -1.31
LINC01538-201ENST00000588074 MTA1Q13330 715 aa6.85□□□□□ -1.31
LINC01538-201ENST00000588074 NFE2L2Q16236 605 aa6.85□□□□□ -1.31
LINC01538-201ENST00000588074 EP400NLQ6ZTU2 488 aa6.85□□□□□ -1.31
LINC01538-201ENST00000588074 CREBRFQ8IUR6 639 aa6.85□□□□□ -1.31
LINC01538-201ENST00000588074 RAVER1Q8IY67 606 aaKnown RBP6.85□□□□□ -1.31
LINC01538-201ENST00000588074 JDP2Q8WYK2 163 aa6.85□□□□□ -1.31
LINC01538-201ENST00000588074 ITFG2Q969R8 447 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms