RNA–Protein interactions for RNA: ENST00000585956.5

PTBP1-208, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-208ENST00000585956 NBPF15Q8N660 670 aa26.23■■□□□ 1.79
PTBP1-208ENST00000585956 CNBD1Q8NA66 436 aa26.23■■□□□ 1.79
PTBP1-208ENST00000585956 COL13A1Q5TAT6 717 aaPredicted RBP26.22■■□□□ 1.79
PTBP1-208ENST00000585956 SRGNP10124 158 aa26.21■■□□□ 1.79
PTBP1-208ENST00000585956 PRPF40BQ6NWY9 871 aaKnown RBP26.21■■□□□ 1.79
PTBP1-208ENST00000585956 SETDB2Q96T68 719 aa26.21■■□□□ 1.79
PTBP1-208ENST00000585956 POTEIP0CG38 1075 aa26.2■■□□□ 1.78
PTBP1-208ENST00000585956 POTEJP0CG39 1038 aa26.2■■□□□ 1.78
PTBP1-208ENST00000585956 U2AF1L5P0DN76 240 aaPredicted RBP26.2■■□□□ 1.78
PTBP1-208ENST00000585956 U2AF1Q01081 240 aaKnown RBP eCLIP26.2■■□□□ 1.789e-17■■□□□ 14.4
PTBP1-208ENST00000585956 OLFM4Q6UX06 510 aa26.2■■□□□ 1.78
PTBP1-208ENST00000585956 ERFEQ4G0M1 354 aa26.18■■□□□ 1.78
PTBP1-208ENST00000585956 MIS18AQ9NYP9 233 aa26.18■■□□□ 1.78
PTBP1-208ENST00000585956 STYK1Q6J9G0 422 aa26.17■■□□□ 1.78
PTBP1-208ENST00000585956 C7orf43Q8WVR3 580 aa26.17■■□□□ 1.78
PTBP1-208ENST00000585956 CFAP53Q96M91 514 aa26.17■■□□□ 1.78
PTBP1-208ENST00000585956 DDNO94850 711 aaPredicted RBP26.16■■□□□ 1.78
PTBP1-208ENST00000585956 TAOK3Q9H2K8 898 aa26.16■■□□□ 1.78
PTBP1-208ENST00000585956 DLG5Q8TDM6 1919 aa26.16■■□□□ 1.78
PTBP1-208ENST00000585956 LTBP3Q9NS15 1303 aa26.15■■□□□ 1.78
PTBP1-208ENST00000585956 SNRPA1P09661 255 aaKnown RBP26.15■■□□□ 1.78
PTBP1-208ENST00000585956 ST5P78524 1137 aa26.15■■□□□ 1.78
PTBP1-208ENST00000585956 HLFQ16534 295 aa26.15■■□□□ 1.78
PTBP1-208ENST00000585956 MASTLQ96GX5 879 aa26.14■■□□□ 1.78
PTBP1-208ENST00000585956 PDZRN3Q9UPQ7 1066 aa26.14■■□□□ 1.78
PTBP1-208ENST00000585956 FAM177BA6PVY3 158 aa26.13■■□□□ 1.77
PTBP1-208ENST00000585956 SLC51AQ86UW1 340 aa26.13■■□□□ 1.77
PTBP1-208ENST00000585956 NBPF5PQ86XG9 351 aaPredicted RBP26.13■■□□□ 1.77
PTBP1-208ENST00000585956 CNKSR1Q969H4 720 aa26.13■■□□□ 1.77
PTBP1-208ENST00000585956 LAMB4A4D0S4 1761 aa26.12■■□□□ 1.77
PTBP1-208ENST00000585956 NPHP1O15259 732 aa26.12■■□□□ 1.77
PTBP1-208ENST00000585956 NUDCQ9Y266 331 aa26.12■■□□□ 1.77
PTBP1-208ENST00000585956 KDM3BQ7LBC6 1761 aa26.11■■□□□ 1.77
PTBP1-208ENST00000585956 RTF1Q92541 710 aaKnown RBP26.11■■□□□ 1.77
PTBP1-208ENST00000585956 KLRG2A4D1S0 409 aaPredicted RBP26.1■■□□□ 1.77
PTBP1-208ENST00000585956 CLEC4GQ6UXB4 293 aa26.1■■□□□ 1.77
PTBP1-208ENST00000585956 NIP7Q9Y221 180 aaKnown RBP eCLIP26.1■■□□□ 1.77
PTBP1-208ENST00000585956 DPY19L2Q6NUT2 758 aa26.09■■□□□ 1.77
PTBP1-208ENST00000585956 NPM2Q86SE8 214 aaKnown RBP26.09■■□□□ 1.77
PTBP1-208ENST00000585956 THUMPD2Q9BTF0 503 aaKnown RBP26.09■■□□□ 1.77
PTBP1-208ENST00000585956 ZNF541Q9H0D2 1346 aa26.09■■□□□ 1.77
PTBP1-208ENST00000585956 ABCC12Q96J65 1359 aa26.08■■□□□ 1.77
PTBP1-208ENST00000585956 ZNF277Q9NRM2 450 aaPredicted RBP26.07■■□□□ 1.76
PTBP1-208ENST00000585956 SNED1Q8TER0 1413 aa26.06■■□□□ 1.76
PTBP1-208ENST00000585956 HSPA1AP0DMV8 641 aaKnown RBP26.06■■□□□ 1.76
PTBP1-208ENST00000585956 HSPA1BP0DMV9 641 aaKnown RBP26.06■■□□□ 1.76
PTBP1-208ENST00000585956 TAF7Q15545 349 aaPredicted RBP26.06■■□□□ 1.76
PTBP1-208ENST00000585956 COL4A5P29400 1685 aa26.06■■□□□ 1.76
PTBP1-208ENST00000585956 NUP98P52948 1817 aa26.05■■□□□ 1.76
PTBP1-208ENST00000585956 HTATSF1O43719 755 aaKnown RBP26.05■■□□□ 1.76
PTBP1-208ENST00000585956 NPR1P16066 1061 aa26.05■■□□□ 1.76
PTBP1-208ENST00000585956 NGEFQ8N5V2 710 aa26.05■■□□□ 1.76
PTBP1-208ENST00000585956 PLEKHF1Q96S99 279 aa26.05■■□□□ 1.76
PTBP1-208ENST00000585956 CCDC93Q567U6 631 aa26.04■■□□□ 1.76
PTBP1-208ENST00000585956 CHADLQ6NUI6 762 aa26.04■■□□□ 1.76
PTBP1-208ENST00000585956 ZNF652Q9Y2D9 606 aa26.04■■□□□ 1.76
PTBP1-208ENST00000585956 TTLL7Q6ZT98 887 aa26.03■■□□□ 1.76
PTBP1-208ENST00000585956 NUTM1Q86Y26 1132 aa26.03■■□□□ 1.76
PTBP1-208ENST00000585956 FKBP4Q02790 459 aaKnown RBP eCLIP26.02■■□□□ 1.76
PTBP1-208ENST00000585956 CAPN15O75808 1086 aa26.01■■□□□ 1.75
PTBP1-208ENST00000585956 TPTE2Q6XPS3 522 aa26.01■■□□□ 1.75
PTBP1-208ENST00000585956 ADAMTSL1Q8N6G6 1762 aa26.01■■□□□ 1.75
PTBP1-208ENST00000585956 L3MBTL3Q96JM7 780 aaPredicted RBP26.01■■□□□ 1.75
PTBP1-208ENST00000585956 TAF1DQ9H5J8 278 aaPredicted RBP26.01■■□□□ 1.75
PTBP1-208ENST00000585956 MKRN1Q9UHC7 482 aaKnown RBP26.01■■□□□ 1.75
PTBP1-208ENST00000585956 SCN4AP35499 1836 aa26■■□□□ 1.75
PTBP1-208ENST00000585956 UBN2Q6ZU65 1347 aa26■■□□□ 1.75
PTBP1-208ENST00000585956 EIF4A1P60842 406 aaKnown RBP26■■□□□ 1.75
PTBP1-208ENST00000585956 SOGA3Q5TF21 947 aa26■■□□□ 1.75
PTBP1-208ENST00000585956 PASKQ96RG2 1323 aa25.99■■□□□ 1.75
PTBP1-208ENST00000585956 C3orf67Q6ZVT6 689 aa25.98■■□□□ 1.75
PTBP1-208ENST00000585956 LTBP1Q14766 1721 aa25.97■■□□□ 1.75
PTBP1-208ENST00000585956 RGL2O15211 777 aa25.97■■□□□ 1.75
PTBP1-208ENST00000585956 CRY2Q49AN0 593 aa25.97■■□□□ 1.75
PTBP1-208ENST00000585956 TNS4Q8IZW8 715 aa25.97■■□□□ 1.75
PTBP1-208ENST00000585956 CREBZFQ9NS37 354 aa25.97■■□□□ 1.75
PTBP1-208ENST00000585956 RRP7AQ9Y3A4 280 aaKnown RBP25.97■■□□□ 1.75
PTBP1-208ENST00000585956 MAP3K15Q6ZN16 1313 aa25.96■■□□□ 1.75
PTBP1-208ENST00000585956 MYL6BP14649 208 aa25.96■■□□□ 1.75
PTBP1-208ENST00000585956 GPTP24298 496 aa25.96■■□□□ 1.75
PTBP1-208ENST00000585956 SYNE4Q8N205 404 aa25.96■■□□□ 1.75
PTBP1-208ENST00000585956 ITGBL1O95965 494 aaPredicted RBP25.95■■□□□ 1.74
PTBP1-208ENST00000585956 ZBTB3Q9H5J0 574 aa25.95■■□□□ 1.74
PTBP1-208ENST00000585956 RNF123Q5XPI4 1314 aa25.94■■□□□ 1.74
PTBP1-208ENST00000585956 IARSP41252 1262 aaKnown RBP25.94■■□□□ 1.74
PTBP1-208ENST00000585956 NFE2L2Q16236 605 aa25.94■■□□□ 1.74
PTBP1-208ENST00000585956 SUSD4Q5VX71 490 aa25.94■■□□□ 1.74
PTBP1-208ENST00000585956 LDHDQ86WU2 507 aa25.94■■□□□ 1.74
PTBP1-208ENST00000585956 FZD9O00144 591 aa25.93■■□□□ 1.74
PTBP1-208ENST00000585956 LRP10Q7Z4F1 713 aa25.93■■□□□ 1.74
PTBP1-208ENST00000585956 ERVV-1B6SEH8 477 aa25.92■■□□□ 1.74
PTBP1-208ENST00000585956 EAPPQ56P03 285 aaPredicted RBP25.92■■□□□ 1.74
PTBP1-208ENST00000585956 RTKN2Q8IZC4 609 aa25.92■■□□□ 1.74
PTBP1-208ENST00000585956 CNTNAP1P78357 1384 aa25.92■■□□□ 1.74
PTBP1-208ENST00000585956 IQCA1LA6NCM1 817 aa25.91■■□□□ 1.74
PTBP1-208ENST00000585956 PROSER3Q2NL68 480 aa25.91■■□□□ 1.74
PTBP1-208ENST00000585956 NTSR2O95665 410 aa25.9■■□□□ 1.74
PTBP1-208ENST00000585956 GTF2E1P29083 439 aaPredicted RBP25.9■■□□□ 1.74
PTBP1-208ENST00000585956 RIC1Q4ADV7 1423 aa25.89■■□□□ 1.74
PTBP1-208ENST00000585956 ANXA1P04083 346 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms