RNA–Protein interactions for RNA: ENST00000585652.5

AP3D1-203, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 2

Gene AP3D1, Length 4,433 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-203ENST00000585652 RBM27Q9P2N5 1060 aaKnown RBP15.44■□□□□ 0.06
AP3D1-203ENST00000585652 TFIP11Q9UBB9 837 aaKnown RBP15.44■□□□□ 0.06
AP3D1-203ENST00000585652 PNMA6EA0A0J9YXQ4 647 aa15.44■□□□□ 0.06
AP3D1-203ENST00000585652 NECAB1Q8N987 351 aa15.44■□□□□ 0.06
AP3D1-203ENST00000585652 ADCY10Q96PN6 1610 aa15.43■□□□□ 0.06
AP3D1-203ENST00000585652 XBP1P17861 261 aa15.43■□□□□ 0.06
AP3D1-203ENST00000585652 CCT2P78371 535 aaKnown RBP15.43■□□□□ 0.06
AP3D1-203ENST00000585652 SAMD1Q6SPF0 538 aaPredicted RBP15.43■□□□□ 0.06
AP3D1-203ENST00000585652 ZGPATQ8N5A5 531 aaKnown RBP15.43■□□□□ 0.06
AP3D1-203ENST00000585652 SNX21Q969T3 373 aa15.43■□□□□ 0.06
AP3D1-203ENST00000585652 SH2B1Q9NRF2 756 aaPredicted RBP15.43■□□□□ 0.06
AP3D1-203ENST00000585652 IGHMBP2P38935 993 aaKnown RBP15.43■□□□□ 0.06
AP3D1-203ENST00000585652 NAT10Q9H0A0 1025 aaKnown RBP15.43■□□□□ 0.06
AP3D1-203ENST00000585652 NUP62CLQ9H1M0 184 aa15.43■□□□□ 0.06
AP3D1-203ENST00000585652 USP19O94966 1318 aa15.42■□□□□ 0.06
AP3D1-203ENST00000585652 SOS1Q07889 1333 aaPredicted RBP15.42■□□□□ 0.06
AP3D1-203ENST00000585652 HAND2P61296 217 aa15.42■□□□□ 0.06
AP3D1-203ENST00000585652 TPM3P06753 285 aa15.42■□□□□ 0.06
AP3D1-203ENST00000585652 SYNMO15061 1565 aa15.42■□□□□ 0.06
AP3D1-203ENST00000585652 NBPF7P0C2Y1 421 aaPredicted RBP15.42■□□□□ 0.06
AP3D1-203ENST00000585652 GJB2P29033 226 aa15.42■□□□□ 0.06
AP3D1-203ENST00000585652 USP26Q9BXU7 913 aa15.42■□□□□ 0.06
AP3D1-203ENST00000585652 TRIM34Q9BYJ4 488 aa15.42■□□□□ 0.06
AP3D1-203ENST00000585652 ZMYND15Q9H091 742 aa15.42■□□□□ 0.06
AP3D1-203ENST00000585652 PLXNC1O60486 1568 aa15.41■□□□□ 0.06
AP3D1-203ENST00000585652 CCDC69A6NI79 296 aa15.41■□□□□ 0.06
AP3D1-203ENST00000585652 STX6O43752 255 aa15.41■□□□□ 0.06
AP3D1-203ENST00000585652 CCDC82Q8N4S0 544 aa15.41■□□□□ 0.06
AP3D1-203ENST00000585652 LRRC2Q9BYS8 371 aa15.41■□□□□ 0.06
AP3D1-203ENST00000585652 CFAP45Q9UL16 551 aa15.41■□□□□ 0.06
AP3D1-203ENST00000585652 NCBP3Q53F19 620 aaKnown RBP15.41■□□□□ 0.06
AP3D1-203ENST00000585652 TRIM22Q8IYM9 498 aa15.41■□□□□ 0.06
AP3D1-203ENST00000585652 IL17REQ8NFR9 667 aa15.41■□□□□ 0.06
AP3D1-203ENST00000585652 SMC2O95347 1197 aa15.4■□□□□ 0.06
AP3D1-203ENST00000585652 CHMLP26374 656 aa15.4■□□□□ 0.06
AP3D1-203ENST00000585652 TSR1Q2NL82 804 aaKnown RBP15.4■□□□□ 0.06
AP3D1-203ENST00000585652 TPM1P09493 284 aa15.4■□□□□ 0.06
AP3D1-203ENST00000585652 KLHDC4Q8TBB5 520 aa15.4■□□□□ 0.06
AP3D1-203ENST00000585652 BRMS1Q9HCU9 246 aa15.4■□□□□ 0.06
AP3D1-203ENST00000585652 RBM8AQ9Y5S9 174 aaKnown RBP15.4■□□□□ 0.06
AP3D1-203ENST00000585652 PRR36Q9H6K5 1346 aa15.4■□□□□ 0.06
AP3D1-203ENST00000585652 IQGAP3Q86VI3 1631 aa15.4■□□□□ 0.06
AP3D1-203ENST00000585652 OLFM4Q6UX06 510 aa15.4■□□□□ 0.06
AP3D1-203ENST00000585652 RAB11FIP4Q86YS3 637 aa15.4■□□□□ 0.06
AP3D1-203ENST00000585652 PIBF1Q8WXW3 757 aa15.4■□□□□ 0.06
AP3D1-203ENST00000585652 PANK2Q9BZ23 570 aa15.4■□□□□ 0.06
AP3D1-203ENST00000585652 KCNQ3O43525 872 aa15.39■□□□□ 0.05
AP3D1-203ENST00000585652 ANKRD18BA2A2Z9 1011 aa15.39■□□□□ 0.05
AP3D1-203ENST00000585652 MINDY4BA8MYZ0 360 aa15.39■□□□□ 0.05
AP3D1-203ENST00000585652 PCMTD1Q96MG8 357 aaPredicted RBP15.39■□□□□ 0.05
AP3D1-203ENST00000585652 UBAC1Q9BSL1 405 aa15.39■□□□□ 0.05
AP3D1-203ENST00000585652 BICC1Q9H694 974 aaKnown RBP15.39■□□□□ 0.05
AP3D1-203ENST00000585652 DDX21Q9NR30 783 aaKnown RBP eCLIP15.39■□□□□ 0.05
AP3D1-203ENST00000585652 CDC42BPBQ9Y5S2 1711 aa15.38■□□□□ 0.05
AP3D1-203ENST00000585652 ROBO2Q9HCK4 1378 aa15.38■□□□□ 0.05
AP3D1-203ENST00000585652 KLHL40Q2TBA0 621 aa15.38■□□□□ 0.05
AP3D1-203ENST00000585652 ZNF790Q6PG37 636 aa15.38■□□□□ 0.05
AP3D1-203ENST00000585652 PDILTQ8N807 584 aa15.38■□□□□ 0.05
AP3D1-203ENST00000585652 SIRT1Q96EB6 747 aa15.38■□□□□ 0.05
AP3D1-203ENST00000585652 CPA1P15085 419 aa15.38■□□□□ 0.05
AP3D1-203ENST00000585652 CKAP2LQ8IYA6 745 aa15.38■□□□□ 0.05
AP3D1-203ENST00000585652 NEK1Q96PY6 1258 aa15.38■□□□□ 0.05
AP3D1-203ENST00000585652 CLTCL1P53675 1640 aa15.38■□□□□ 0.05
AP3D1-203ENST00000585652 KIF1BO60333 1816 aa15.38■□□□□ 0.05
AP3D1-203ENST00000585652 RBM25P49756 843 aaKnown RBP15.37■□□□□ 0.05
AP3D1-203ENST00000585652 MAP3K11Q16584 847 aa15.37■□□□□ 0.05
AP3D1-203ENST00000585652 JMYQ8N9B5 988 aa15.37■□□□□ 0.05
AP3D1-203ENST00000585652 BRF1Q92994 677 aa15.37■□□□□ 0.05
AP3D1-203ENST00000585652 NAPBQ9H115 298 aa15.37■□□□□ 0.05
AP3D1-203ENST00000585652 TRPM1Q7Z4N2 1603 aa15.37■□□□□ 0.05
AP3D1-203ENST00000585652 ZNF213O14771 459 aa15.37■□□□□ 0.05
AP3D1-203ENST00000585652 ANKRD20A12PQ8NF67 263 aa15.37■□□□□ 0.05
AP3D1-203ENST00000585652 ABCC4O15439 1325 aa15.37■□□□□ 0.05
AP3D1-203ENST00000585652 DTNBO60941 627 aa15.37■□□□□ 0.05
AP3D1-203ENST00000585652 XRCC6P12956 609 aaKnown RBP eCLIP15.36■□□□□ 0.05
AP3D1-203ENST00000585652 NMIQ13287 307 aaPredicted RBP15.36■□□□□ 0.05
AP3D1-203ENST00000585652 HSP90AB3PQ58FF7 597 aa15.36■□□□□ 0.05
AP3D1-203ENST00000585652 DCAF5Q96JK2 942 aa15.36■□□□□ 0.05
AP3D1-203ENST00000585652 ANAPC15P60006 121 aa15.36■□□□□ 0.05
AP3D1-203ENST00000585652 SCAND2PQ9GZW5 306 aaPredicted RBP15.36■□□□□ 0.05
AP3D1-203ENST00000585652 SLC3A2P08195 630 aaKnown RBP15.36■□□□□ 0.05
AP3D1-203ENST00000585652 TET3O43151 1660 aa15.36■□□□□ 0.05
AP3D1-203ENST00000585652 ABCC3O15438 1527 aa15.36■□□□□ 0.05
AP3D1-203ENST00000585652 EFCAB6Q5THR3 1501 aa15.36■□□□□ 0.05
AP3D1-203ENST00000585652 FILIP1Q7Z7B0 1213 aa15.35■□□□□ 0.05
AP3D1-203ENST00000585652 RAB3GAP1Q15042 981 aa15.35■□□□□ 0.05
AP3D1-203ENST00000585652 CCDC183Q5T5S1 534 aa15.35■□□□□ 0.05
AP3D1-203ENST00000585652 ACSBG1Q96GR2 724 aa15.35■□□□□ 0.05
AP3D1-203ENST00000585652 USP25Q9UHP3 1055 aa15.35■□□□□ 0.05
AP3D1-203ENST00000585652 TEX13AQ9BXU3 409 aaPredicted RBP15.35■□□□□ 0.05
AP3D1-203ENST00000585652 TSPOAP1O95153 1857 aa15.35■□□□□ 0.05
AP3D1-203ENST00000585652 HECW2Q9P2P5 1572 aa15.34■□□□□ 0.05
AP3D1-203ENST00000585652 CDKL5O76039 1030 aa15.34■□□□□ 0.05
AP3D1-203ENST00000585652 IL2RBP14784 551 aa15.34■□□□□ 0.05
AP3D1-203ENST00000585652 EIF4A1P60842 406 aaKnown RBP15.34■□□□□ 0.05
AP3D1-203ENST00000585652 CCDC47Q96A33 483 aaKnown RBP15.34■□□□□ 0.05
AP3D1-203ENST00000585652 NGLY1Q96IV0 654 aa15.34■□□□□ 0.05
AP3D1-203ENST00000585652 C8orf76Q96K31 380 aa15.34■□□□□ 0.05
AP3D1-203ENST00000585652 ATP2B2Q01814 1243 aa15.34■□□□□ 0.05
AP3D1-203ENST00000585652 MAP3K12Q12852 859 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms