RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 ANKRD36CQ5JPF3 1778 aa20.27■□□□□ 0.84
CSNK1D-212ENST00000580061 ADCY9O60503 1353 aa20.27■□□□□ 0.84
CSNK1D-212ENST00000580061 IPO8O15397 1037 aaKnown RBP20.27■□□□□ 0.84
CSNK1D-212ENST00000580061 DDX58O95786 925 aaKnown RBP20.27■□□□□ 0.84
CSNK1D-212ENST00000580061 ANKRD13DQ6ZTN6 518 aa20.27■□□□□ 0.84
CSNK1D-212ENST00000580061 PLBD2Q8NHP8 589 aa20.27■□□□□ 0.84
CSNK1D-212ENST00000580061 ARXQ96QS3 562 aa20.27■□□□□ 0.84
CSNK1D-212ENST00000580061 MAP3K15Q6ZN16 1313 aa20.27■□□□□ 0.83
CSNK1D-212ENST00000580061 SOCS7O14512 581 aa20.26■□□□□ 0.83
CSNK1D-212ENST00000580061 RFC4P35249 363 aa20.26■□□□□ 0.83
CSNK1D-212ENST00000580061 ZKSCAN2Q63HK3 967 aa20.26■□□□□ 0.83
CSNK1D-212ENST00000580061 KSR2Q6VAB6 950 aa20.26■□□□□ 0.83
CSNK1D-212ENST00000580061 COL23A1Q86Y22 540 aaPredicted RBP20.26■□□□□ 0.83
CSNK1D-212ENST00000580061 NARFQ9UHQ1 456 aa20.26■□□□□ 0.83
CSNK1D-212ENST00000580061 N4BP2Q86UW6 1770 aaPredicted RBP20.26■□□□□ 0.83
CSNK1D-212ENST00000580061 PI4KAP2A4QPH2 592 aa20.25■□□□□ 0.83
CSNK1D-212ENST00000580061 ERVV-1B6SEH8 477 aa20.25■□□□□ 0.83
CSNK1D-212ENST00000580061 CAMTA2O94983 1202 aa20.25■□□□□ 0.83
CSNK1D-212ENST00000580061 ATF7IPQ6VMQ6 1270 aa20.25■□□□□ 0.83
CSNK1D-212ENST00000580061 PI4KAP1Q8N8J0 262 aa20.25■□□□□ 0.83
CSNK1D-212ENST00000580061 API5Q9BZZ5 524 aaKnown RBP20.25■□□□□ 0.83
CSNK1D-212ENST00000580061 ZBTB3Q9H5J0 574 aa20.25■□□□□ 0.83
CSNK1D-212ENST00000580061 USP42Q9H9J4 1324 aaKnown RBP20.25■□□□□ 0.83
CSNK1D-212ENST00000580061 TRIM27P14373 513 aa20.24■□□□□ 0.83
CSNK1D-212ENST00000580061 RRP1P56182 461 aaKnown RBP20.24■□□□□ 0.83
CSNK1D-212ENST00000580061 RIC3Q7Z5B4 369 aa20.24■□□□□ 0.83
CSNK1D-212ENST00000580061 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.24■□□□□ 0.83
CSNK1D-212ENST00000580061 SRP68Q9UHB9 627 aaKnown RBP20.24■□□□□ 0.83
CSNK1D-212ENST00000580061 MAP3K2Q9Y2U5 619 aa20.24■□□□□ 0.83
CSNK1D-212ENST00000580061 SUPT16HQ9Y5B9 1047 aaKnown RBP20.24■□□□□ 0.83
CSNK1D-212ENST00000580061 RNF123Q5XPI4 1314 aa20.24■□□□□ 0.83
CSNK1D-212ENST00000580061 F6X3S4 739 aa20.23■□□□□ 0.83
CSNK1D-212ENST00000580061 RGL2O15211 777 aa20.23■□□□□ 0.83
CSNK1D-212ENST00000580061 PLIN1O60240 522 aa20.23■□□□□ 0.83
CSNK1D-212ENST00000580061 ZPR1O75312 459 aa20.23■□□□□ 0.83
CSNK1D-212ENST00000580061 HLFQ16534 295 aa20.23■□□□□ 0.83
CSNK1D-212ENST00000580061 USPL1Q5W0Q7 1092 aa20.23■□□□□ 0.83
CSNK1D-212ENST00000580061 TNNQ9UQP3 1299 aa20.23■□□□□ 0.83
CSNK1D-212ENST00000580061 AFDNP55196 1824 aaKnown RBP20.23■□□□□ 0.83
CSNK1D-212ENST00000580061 CASZ1Q86V15 1759 aa20.22■□□□□ 0.83
CSNK1D-212ENST00000580061 GIGYF2Q6Y7W6 1299 aaKnown RBP20.22■□□□□ 0.83
CSNK1D-212ENST00000580061 DNAAF4Q8WXU2 420 aa20.22■□□□□ 0.83
CSNK1D-212ENST00000580061 BCL2L12Q9HB09 334 aa20.22■□□□□ 0.83
CSNK1D-212ENST00000580061 METTL22Q9BUU2 404 aaPredicted RBP20.21■□□□□ 0.83
CSNK1D-212ENST00000580061 PXDNLA1KZ92 1463 aa20.21■□□□□ 0.83
CSNK1D-212ENST00000580061 MSH5O43196 834 aa20.2■□□□□ 0.82
CSNK1D-212ENST00000580061 GYS1P13807 737 aa20.2■□□□□ 0.82
CSNK1D-212ENST00000580061 CLEC4GQ6UXB4 293 aa20.2■□□□□ 0.82
CSNK1D-212ENST00000580061 ZNF652Q9Y2D9 606 aa20.2■□□□□ 0.82
CSNK1D-212ENST00000580061 ABCC4O15439 1325 aa20.2■□□□□ 0.82
CSNK1D-212ENST00000580061 R3HDM1Q15032 1099 aaKnown RBP20.19■□□□□ 0.82
CSNK1D-212ENST00000580061 HSP90AB3PQ58FF7 597 aa20.19■□□□□ 0.82
CSNK1D-212ENST00000580061 CLUAP1Q96AJ1 413 aa20.19■□□□□ 0.82
CSNK1D-212ENST00000580061 PDGFDQ9GZP0 370 aaPredicted RBP20.19■□□□□ 0.82
CSNK1D-212ENST00000580061 ATP10DQ9P241 1426 aa20.19■□□□□ 0.82
CSNK1D-212ENST00000580061 TCIRG1Q13488 830 aa20.18■□□□□ 0.82
CSNK1D-212ENST00000580061 SLC4A10Q6U841 1118 aa20.18■□□□□ 0.82
CSNK1D-212ENST00000580061 DZIP1LQ8IYY4 767 aaKnown RBP20.18■□□□□ 0.82
CSNK1D-212ENST00000580061 MYD88Q99836 296 aa20.18■□□□□ 0.82
CSNK1D-212ENST00000580061 MS4A1P11836 297 aa20.17■□□□□ 0.82
CSNK1D-212ENST00000580061 NEXNQ0ZGT2 675 aa20.17■□□□□ 0.82
CSNK1D-212ENST00000580061 FKBP8Q14318 412 aa20.17■□□□□ 0.82
CSNK1D-212ENST00000580061 BEND3Q5T5X7 828 aa20.17■□□□□ 0.82
CSNK1D-212ENST00000580061 FTSJ3Q8IY81 847 aaKnown RBP20.17■□□□□ 0.82
CSNK1D-212ENST00000580061 ISCA1Q9BUE6 129 aa20.17■□□□□ 0.82
CSNK1D-212ENST00000580061 COL24A1Q17RW2 1714 aa20.16■□□□□ 0.82
CSNK1D-212ENST00000580061 IGKV5-2P06315 115 aa20.16■□□□□ 0.82
CSNK1D-212ENST00000580061 RLBP1P12271 317 aa20.16■□□□□ 0.82
CSNK1D-212ENST00000580061 PDE3AQ14432 1141 aa20.16■□□□□ 0.82
CSNK1D-212ENST00000580061 ZNF34Q8IZ26 560 aa20.16■□□□□ 0.82
CSNK1D-212ENST00000580061 LINS1Q8NG48 757 aa20.16■□□□□ 0.82
CSNK1D-212ENST00000580061 ATP5J2-PTCD1G3V325 749 aa20.15■□□□□ 0.82
CSNK1D-212ENST00000580061 CCT4P50991 539 aaKnown RBP20.15■□□□□ 0.82
CSNK1D-212ENST00000580061 C20orf194Q5TEA3 1177 aa20.15■□□□□ 0.82
CSNK1D-212ENST00000580061 TBC1D9BQ66K14 1250 aa20.15■□□□□ 0.82
CSNK1D-212ENST00000580061 INTS3Q68E01 1043 aaKnown RBP20.15■□□□□ 0.82
CSNK1D-212ENST00000580061 TMEM57Q8N5G2 664 aa20.15■□□□□ 0.82
CSNK1D-212ENST00000580061 PANK1Q8TE04 598 aa20.15■□□□□ 0.82
CSNK1D-212ENST00000580061 SLC16A10Q8TF71 515 aa20.15■□□□□ 0.82
CSNK1D-212ENST00000580061 PSDA5PKW4 1024 aaPredicted RBP20.14■□□□□ 0.81
CSNK1D-212ENST00000580061 TRIM28Q13263 835 aaKnown RBP20.14■□□□□ 0.81
CSNK1D-212ENST00000580061 NLGN1Q8N2Q7 840 aa20.14■□□□□ 0.81
CSNK1D-212ENST00000580061 SRCIN1Q9C0H9 1055 aa20.14■□□□□ 0.81
CSNK1D-212ENST00000580061 UBN2Q6ZU65 1347 aa20.13■□□□□ 0.81
CSNK1D-212ENST00000580061 NEURL1BA8MQ27 555 aa20.13■□□□□ 0.81
CSNK1D-212ENST00000580061 GPTP24298 496 aa20.13■□□□□ 0.81
CSNK1D-212ENST00000580061 CWF19L2Q2TBE0 894 aaKnown RBP20.13■□□□□ 0.81
CSNK1D-212ENST00000580061 NIP7Q9Y221 180 aaKnown RBP eCLIP20.13■□□□□ 0.81
CSNK1D-212ENST00000580061 IBTKQ9P2D0 1353 aaPredicted RBP20.12■□□□□ 0.81
CSNK1D-212ENST00000580061 ALDH1L1O75891 902 aa20.12■□□□□ 0.81
CSNK1D-212ENST00000580061 TM4SF1P30408 202 aa20.12■□□□□ 0.81
CSNK1D-212ENST00000580061 NFIXQ14938 502 aa20.12■□□□□ 0.81
CSNK1D-212ENST00000580061 BICDL1Q6ZP65 573 aa20.12■□□□□ 0.81
CSNK1D-212ENST00000580061 NLRP10Q86W26 655 aa20.12■□□□□ 0.81
CSNK1D-212ENST00000580061 CCDC191Q8NCU4 936 aa20.12■□□□□ 0.81
CSNK1D-212ENST00000580061 PARP10Q53GL7 1025 aa20.11■□□□□ 0.81
CSNK1D-212ENST00000580061 SETDB2Q96T68 719 aa20.11■□□□□ 0.81
CSNK1D-212ENST00000580061 CWC25Q9NXE8 425 aaPredicted RBP20.11■□□□□ 0.81
CSNK1D-212ENST00000580061 MSL1Q68DK7 614 aa20.1■□□□□ 0.81
CSNK1D-212ENST00000580061 CARMIL3Q8ND23 1372 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms